© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|5353 |
| Gene name | |
| Location | Contig_268:528..1131 |
| Strand | - |
| Gene length (bp) | 603 |
| Transcript length (bp) | 471 |
| Coding sequence length (bp) | 471 |
| Protein length (aa) | 157 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF12273 | RCR | Chitin synthesis regulation, resistance to Congo red | 1.4E-09 | 34 | 151 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 70 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 31 | 53 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|5353 MGLVARDDDLPFGWVRDGDFIVPWWQSRTGIIVKWIIFLILFTLIMGYILGGYLHARARLRKGLPPLAYHRCLVG RRTAHPPPQQQYGWPQNNYGYYQPNAYHMNDMNAPPVYDPNRPPVYMPPPDGGSKVDPSQWTRRAPETNPAPDYQ PSGNMR* |
| Coding | >Hirsu2|5353 ATGGGACTGGTCGCAAGGGACGACGACCTGCCGTTTGGCTGGGTCCGAGACGGCGACTTCATCGTTCCCTGGTGG CAGAGCAGGACGGGCATCATCGTCAAGTGGATCATCTTCCTCATTCTCTTTACCCTCATCATGGGCTACATTCTC GGCGGCTACCTGCACGCTCGGGCCAGGCTCCGGAAGGGCCTCCCGCCCCTCGCCTATCACCGGTGCCTGGTCGGC CGACGGACGGCACACCCGCCCCCGCAGCAGCAGTACGGCTGGCCGCAGAACAACTACGGCTACTACCAGCCCAAC GCCTACCACATGAACGACATGAACGCGCCGCCCGTCTACGACCCCAACCGCCCGCCCGTCTACATGCCGCCCCCC GACGGAGGCTCCAAGGTCGACCCGTCGCAGTGGACGAGGCGTGCGCCCGAGACCAATCCCGCGCCCGACTACCAG CCGTCCGGCAACATGCGATGA |
| Transcript | >Hirsu2|5353 ATGGGACTGGTCGCAAGGGACGACGACCTGCCGTTTGGCTGGGTCCGAGACGGCGACTTCATCGTTCCCTGGTGG CAGAGCAGGACGGGCATCATCGTCAAGTGGATCATCTTCCTCATTCTCTTTACCCTCATCATGGGCTACATTCTC GGCGGCTACCTGCACGCTCGGGCCAGGCTCCGGAAGGGCCTCCCGCCCCTCGCCTATCACCGGTGCCTGGTCGGC CGACGGACGGCACACCCGCCCCCGCAGCAGCAGTACGGCTGGCCGCAGAACAACTACGGCTACTACCAGCCCAAC GCCTACCACATGAACGACATGAACGCGCCGCCCGTCTACGACCCCAACCGCCCGCCCGTCTACATGCCGCCCCCC GACGGAGGCTCCAAGGTCGACCCGTCGCAGTGGACGAGGCGTGCGCCCGAGACCAATCCCGCGCCCGACTACCAG CCGTCCGGCAACATGCGATGA |
| Gene | >Hirsu2|5353 ATGGGACTGGTCGCAAGGGACGACGACCTGCCGTTTGGCTGGGTCCGAGACGGCGACTTCATCGTTCCCTGGTGG CAGAGCAGGGTGAGCGCTCCATCCGCCCTTGGGCCCGTCGTGGGCCAGAGACTGACGTGGGCGACAGACGGGCAT CATCGTCAAGTGGATCATCTTCCTCATTCTCTTTACCCTCATCATGGGCTACATTCTCGGCGGCTACCTGCACGC TCGGGCCAGGCTCCGGAAGGGCCTCCCGCCCCTCGCCTATCACCGGGTAAGCCCCCCCCTGCCTCTTCCCTCGTC GCCCGTGAAAGCGAGCCGCGTGGGCTGACTTGCTGCTTGCCGCAGTGCCTGGTCGGCCGACGGACGGCACACCCG CCCCCGCAGCAGCAGTACGGCTGGCCGCAGAACAACTACGGCTACTACCAGCCCAACGCCTACCACATGAACGAC ATGAACGCGCCGCCCGTCTACGACCCCAACCGCCCGCCCGTCTACATGCCGCCCCCCGACGGAGGCTCCAAGGTC GACCCGTCGCAGTGGACGAGGCGTGCGCCCGAGACCAATCCCGCGCCCGACTACCAGCCGTCCGGCAACATGCGA TGA |