Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5353
Gene name
LocationContig_268:528..1131
Strand-
Gene length (bp)603
Transcript length (bp)471
Coding sequence length (bp)471
Protein length (aa) 157

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12273 RCR Chitin synthesis regulation, resistance to Congo red 1.1E-09 34 151

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 70 0.5

Transmembrane Domains

Domain # Start End Length
1 31 53 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5353
MGLVARDDDLPFGWVRDGDFIVPWWQSRTGIIVKWIIFLILFTLIMGYILGGYLHARARLRKGLPPLAYHRCLVG
RRTAHPPPQQQYGWPQNNYGYYQPNAYHMNDMNAPPVYDPNRPPVYMPPPDGGSKVDPSQWTRRAPETNPAPDYQ
PSGNMR*
Coding >Hirsu2|5353
ATGGGACTGGTCGCAAGGGACGACGACCTGCCGTTTGGCTGGGTCCGAGACGGCGACTTCATCGTTCCCTGGTGG
CAGAGCAGGACGGGCATCATCGTCAAGTGGATCATCTTCCTCATTCTCTTTACCCTCATCATGGGCTACATTCTC
GGCGGCTACCTGCACGCTCGGGCCAGGCTCCGGAAGGGCCTCCCGCCCCTCGCCTATCACCGGTGCCTGGTCGGC
CGACGGACGGCACACCCGCCCCCGCAGCAGCAGTACGGCTGGCCGCAGAACAACTACGGCTACTACCAGCCCAAC
GCCTACCACATGAACGACATGAACGCGCCGCCCGTCTACGACCCCAACCGCCCGCCCGTCTACATGCCGCCCCCC
GACGGAGGCTCCAAGGTCGACCCGTCGCAGTGGACGAGGCGTGCGCCCGAGACCAATCCCGCGCCCGACTACCAG
CCGTCCGGCAACATGCGATGA
Transcript >Hirsu2|5353
ATGGGACTGGTCGCAAGGGACGACGACCTGCCGTTTGGCTGGGTCCGAGACGGCGACTTCATCGTTCCCTGGTGG
CAGAGCAGGACGGGCATCATCGTCAAGTGGATCATCTTCCTCATTCTCTTTACCCTCATCATGGGCTACATTCTC
GGCGGCTACCTGCACGCTCGGGCCAGGCTCCGGAAGGGCCTCCCGCCCCTCGCCTATCACCGGTGCCTGGTCGGC
CGACGGACGGCACACCCGCCCCCGCAGCAGCAGTACGGCTGGCCGCAGAACAACTACGGCTACTACCAGCCCAAC
GCCTACCACATGAACGACATGAACGCGCCGCCCGTCTACGACCCCAACCGCCCGCCCGTCTACATGCCGCCCCCC
GACGGAGGCTCCAAGGTCGACCCGTCGCAGTGGACGAGGCGTGCGCCCGAGACCAATCCCGCGCCCGACTACCAG
CCGTCCGGCAACATGCGATGA
Gene >Hirsu2|5353
ATGGGACTGGTCGCAAGGGACGACGACCTGCCGTTTGGCTGGGTCCGAGACGGCGACTTCATCGTTCCCTGGTGG
CAGAGCAGGGTGAGCGCTCCATCCGCCCTTGGGCCCGTCGTGGGCCAGAGACTGACGTGGGCGACAGACGGGCAT
CATCGTCAAGTGGATCATCTTCCTCATTCTCTTTACCCTCATCATGGGCTACATTCTCGGCGGCTACCTGCACGC
TCGGGCCAGGCTCCGGAAGGGCCTCCCGCCCCTCGCCTATCACCGGGTAAGCCCCCCCCTGCCTCTTCCCTCGTC
GCCCGTGAAAGCGAGCCGCGTGGGCTGACTTGCTGCTTGCCGCAGTGCCTGGTCGGCCGACGGACGGCACACCCG
CCCCCGCAGCAGCAGTACGGCTGGCCGCAGAACAACTACGGCTACTACCAGCCCAACGCCTACCACATGAACGAC
ATGAACGCGCCGCCCGTCTACGACCCCAACCGCCCGCCCGTCTACATGCCGCCCCCCGACGGAGGCTCCAAGGTC
GACCCGTCGCAGTGGACGAGGCGTGCGCCCGAGACCAATCCCGCGCCCGACTACCAGCCGTCCGGCAACATGCGA
TGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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