Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5344
Gene name
LocationContig_2670:710..2107
Strand+
Gene length (bp)1397
Transcript length (bp)1356
Coding sequence length (bp)1356
Protein length (aa) 452

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04082 Fungal_trans Fungal specific transcription factor domain 2.6E-15 240 414

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q9UTA7|YL8B_SCHPO Uncharacterized transcriptional regulatory protein C25B8.11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC25B8.11 PE=3 SV=1 73 423 2.0E-23
sp|Q9P7H9|YIT3_SCHPO Uncharacterized transcriptional regulatory protein C105.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC105.03c PE=3 SV=1 155 431 1.0E-22
sp|P21657|DAL81_YEAST Transcriptional activator protein DAL81 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL81 PE=1 SV=3 153 401 4.0E-21
sp|P52958|CTF1A_FUSSO Cutinase transcription factor 1 alpha OS=Fusarium solani subsp. pisi GN=CTF1-ALPHA PE=2 SV=1 235 420 4.0E-09

GO

GO Term Description Terminal node
GO:0006351 transcription, DNA-templated Yes
GO:0003677 DNA binding Yes
GO:0008270 zinc ion binding Yes
GO:0097159 organic cyclic compound binding No
GO:1901360 organic cyclic compound metabolic process No
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:0009987 cellular process No
GO:1901363 heterocyclic compound binding No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0032774 RNA biosynthetic process No
GO:0003676 nucleic acid binding No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0009059 macromolecule biosynthetic process No
GO:0071704 organic substance metabolic process No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0005488 binding No
GO:0044249 cellular biosynthetic process No
GO:0009058 biosynthetic process No
GO:0008150 biological_process No
GO:0046483 heterocycle metabolic process No
GO:0097659 nucleic acid-templated transcription No
GO:0043170 macromolecule metabolic process No
GO:0044237 cellular metabolic process No
GO:0046914 transition metal ion binding No
GO:1901576 organic substance biosynthetic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0003674 molecular_function No
GO:0019438 aromatic compound biosynthetic process No
GO:0018130 heterocycle biosynthetic process No
GO:0008152 metabolic process No
GO:0046872 metal ion binding No
GO:0043167 ion binding No
GO:0044238 primary metabolic process No
GO:0043169 cation binding No
GO:0016070 RNA metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0090304 nucleic acid metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 30 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5344
LPQTPHAISAEHEAGTGYVPPSGPAAASRIEANELPTPSTTQDSPKVTSPFGPPCGGQQLHACEPGGARPVPQQQ
QQQPQQQPQQPQQQQQQQQQQQQGVYGPAAVVHQNLVYHPSPSTEDLEPPQPADAKSPTLASPTAGRPAHSLEDI
IGRAAYYMGPTSEQDTFLLDAFRYGILSEKYNLDANIVQVHAGSSLPDDRPMHFLFLEIGHPDHVNRARQAASDA
IEAKVWPYGENLVRLYFRHVHPVLPIVSKVRFLRRYHADKKSVPACLRGALYALASVFWRCDMALRGTPCPFQQH
ELVDHAHSALRREIENPNLFILQACLLLIHVTPPAIDSMEAPTTWTFAAQATACAQMIGAHQDPGQWNIQLVEKK
LRRKLWWATFVADCWSSICHGNPPHISASSFNTCPPAMDDLRADEDVPDDLRYLVEPPDALFEVSAGARFLEMLV
S*
Coding >Hirsu2|5344
CTGCCTCAGACTCCGCACGCCATCTCGGCCGAGCATGAAGCCGGCACCGGCTACGTGCCGCCATCCGGTCCGGCG
GCCGCGTCCCGCATCGAGGCCAACGAGCTGCCGACGCCGAGCACGACGCAGGATAGCCCCAAGGTCACGTCGCCC
TTTGGGCCCCCCTGCGGCGGACAGCAGCTTCACGCGTGCGAGCCGGGCGGTGCTCGCCCGGTACCTCAACAGCAG
CAGCAGCAGCCACAGCAGCAGCCTCAGCAGCCTCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGGGGTC
TACGGCCCGGCCGCCGTGGTCCACCAGAACCTCGTCTATCACCCGAGCCCGTCGACGGAGGACCTCGAGCCCCCG
CAGCCGGCCGACGCCAAGTCGCCGACGCTGGCCTCTCCGACGGCCGGACGGCCGGCGCACTCGCTCGAAGACATC
ATCGGCCGGGCGGCCTACTACATGGGCCCGACGTCGGAGCAGGACACGTTCCTGCTGGACGCGTTCCGGTACGGG
ATCCTGAGCGAGAAGTACAACCTCGACGCCAACATCGTGCAGGTGCACGCCGGCAGCTCGCTGCCCGACGACCGG
CCGATGCACTTCCTCTTCCTCGAGATCGGGCACCCGGACCACGTCAACCGGGCGCGGCAGGCGGCGTCGGACGCC
ATCGAGGCCAAGGTCTGGCCGTACGGCGAGAACCTGGTCCGGCTCTACTTCCGGCACGTCCACCCGGTGCTGCCC
ATCGTGTCCAAGGTGCGCTTCCTGCGCCGGTACCACGCCGACAAGAAGAGCGTGCCGGCCTGCCTGCGCGGCGCC
CTCTACGCCCTCGCCTCCGTCTTCTGGCGCTGCGACATGGCGCTGCGCGGCACGCCGTGCCCCTTCCAGCAGCAC
GAGCTCGTCGACCACGCCCACTCGGCCCTGCGGCGCGAGATCGAGAACCCGAACCTGTTCATCCTGCAGGCCTGC
CTGCTGCTCATCCACGTCACGCCGCCGGCCATCGACAGCATGGAGGCGCCCACGACCTGGACCTTCGCCGCCCAG
GCCACCGCCTGCGCCCAGATGATCGGAGCCCACCAGGACCCGGGCCAGTGGAACATCCAGCTGGTCGAGAAGAAG
CTGCGGCGCAAGCTGTGGTGGGCCACCTTCGTCGCCGACTGCTGGTCCTCCATCTGCCACGGCAACCCGCCGCAC
ATCAGCGCCAGCTCCTTCAACACCTGCCCGCCCGCCATGGACGACCTGCGCGCCGACGAGGACGTGCCGGACGAC
CTGCGCTACCTCGTCGAGCCGCCCGATGCCCTGTTCGAGGTCTCGGCCGGTGCTCGCTTCCTCGAGATGCTTGTC
AGTTGA
Transcript >Hirsu2|5344
CTGCCTCAGACTCCGCACGCCATCTCGGCCGAGCATGAAGCCGGCACCGGCTACGTGCCGCCATCCGGTCCGGCG
GCCGCGTCCCGCATCGAGGCCAACGAGCTGCCGACGCCGAGCACGACGCAGGATAGCCCCAAGGTCACGTCGCCC
TTTGGGCCCCCCTGCGGCGGACAGCAGCTTCACGCGTGCGAGCCGGGCGGTGCTCGCCCGGTACCTCAACAGCAG
CAGCAGCAGCCACAGCAGCAGCCTCAGCAGCCTCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGGGGTC
TACGGCCCGGCCGCCGTGGTCCACCAGAACCTCGTCTATCACCCGAGCCCGTCGACGGAGGACCTCGAGCCCCCG
CAGCCGGCCGACGCCAAGTCGCCGACGCTGGCCTCTCCGACGGCCGGACGGCCGGCGCACTCGCTCGAAGACATC
ATCGGCCGGGCGGCCTACTACATGGGCCCGACGTCGGAGCAGGACACGTTCCTGCTGGACGCGTTCCGGTACGGG
ATCCTGAGCGAGAAGTACAACCTCGACGCCAACATCGTGCAGGTGCACGCCGGCAGCTCGCTGCCCGACGACCGG
CCGATGCACTTCCTCTTCCTCGAGATCGGGCACCCGGACCACGTCAACCGGGCGCGGCAGGCGGCGTCGGACGCC
ATCGAGGCCAAGGTCTGGCCGTACGGCGAGAACCTGGTCCGGCTCTACTTCCGGCACGTCCACCCGGTGCTGCCC
ATCGTGTCCAAGGTGCGCTTCCTGCGCCGGTACCACGCCGACAAGAAGAGCGTGCCGGCCTGCCTGCGCGGCGCC
CTCTACGCCCTCGCCTCCGTCTTCTGGCGCTGCGACATGGCGCTGCGCGGCACGCCGTGCCCCTTCCAGCAGCAC
GAGCTCGTCGACCACGCCCACTCGGCCCTGCGGCGCGAGATCGAGAACCCGAACCTGTTCATCCTGCAGGCCTGC
CTGCTGCTCATCCACGTCACGCCGCCGGCCATCGACAGCATGGAGGCGCCCACGACCTGGACCTTCGCCGCCCAG
GCCACCGCCTGCGCCCAGATGATCGGAGCCCACCAGGACCCGGGCCAGTGGAACATCCAGCTGGTCGAGAAGAAG
CTGCGGCGCAAGCTGTGGTGGGCCACCTTCGTCGCCGACTGCTGGTCCTCCATCTGCCACGGCAACCCGCCGCAC
ATCAGCGCCAGCTCCTTCAACACCTGCCCGCCCGCCATGGACGACCTGCGCGCCGACGAGGACGTGCCGGACGAC
CTGCGCTACCTCGTCGAGCCGCCCGATGCCCTGTTCGAGGTCTCGGCCGGTGCTCGCTTCCTCGAGATGCTTGTC
AGTTGA
Gene >Hirsu2|5344
CTGCCTCAGACTCCGCACGCCATCTCGGCCGAGCATGAAGCCGGCACCGGCTACGTGCCGCCATCCGGTCCGGCG
GCCGCGTCCCGCATCGAGGCCAACGAGCTGCCGACGCCGAGCACGACGCAGGATAGCCCCAAGGTCACGTCGCCC
TTTGGGCCCCCCTGCGGCGGACAGCAGCTTCACGCGTGCGAGCCGGGCGGTGCTCGCCCGGTACCTCAACAGCAG
CAGCAGCAGCCACAGCAGCAGCCTCAGCAGCCTCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGGGGTC
TACGGCCCGGCCGCCGTGGTCCACCAGAACCTCGTCTATCACCCGAGCCCGTCGACGGAGGACCTCGAGCCCCCG
CAGCCGGCCGACGCCAAGTCGCCGACGCTGGCCTCTCCGACGGCCGGACGGCCGGCGCACTCGCTCGAAGACATC
ATCGGCCGGGCGGCCTACTACATGGGCCCGACGTCGGAGCAGGACACGTTCCTGCTGGACGCGTTCCGGTACGGG
ATCCTGAGCGAGAAGTACAACCTCGACGCCAACATCGTGCAGGTGCACGCCGGCAGCTCGCTGCCCGACGACCGG
CCGATGCACTTCCTCTTCCTCGAGATCGGGCACCCGGACCACGTCAACCGGGCGCGGCAGGCGGCGTCGGACGCC
ATCGAGGCCAAGGTCTGGCCGTACGGCGAGAACCTGGTCCGGCTCTACTTCCGGCACGTCCACCCGGTGCTGCCC
ATCGTGTCCAAGGTGCGCTTCCTGCGCCGGTACCACGCCGACAAGAAGAGCGTGCCGGCCTGCCTGCGCGGCGCC
CTCTACGCCCTCGCCTCCGTCTTCTGGCGCTGCGACATGGCGCTGCGCGGCACGCCGTGCCCCTTCCAGCAGCAC
GAGCTCGTCGACCACGCCCACTCGGCCCTGCGGCGCGAGATCGAGAACCCGAACCTGTTCATCCTGCAGGCCTGC
CTGCTGCTCATCCACGTCACGCCGCCGGCCATCGACAGCATGGAGGCGCCCACGACCTGGACCTTCGCCGCCCAG
GCCACCGCCTGCGCCCAGATGATCGGAGCCCACCAGGACCCGGGCCAGTGGAACATCCAGCTGGTCGAGAAGAAG
CTGCGGCGCAAGCTGTGGTGGGCCACCTTCGTCGCCGACTGCTGGTCCTCCATCTGCCACGGCAACCCGCCGCAC
ATCAGCGCCAGCTCCTTCAACACCTGCCCGCCCGCCATGGACGACCTGCGCGCCGACGAGGACGTGCCGGACGAC
CTGCGCTACCTCGTCGAGCCGCCCGATGCCCTGTTCGAGGTCTCGGCCGGTGCTCGCTTCCTCGAGATGGTCAAC
ATTGCCCGCTATCTGCGCACCGTCCTCGACTGCAGCTTGTCAGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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