Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|5340
Gene name
Location	Contig_267:10900..11799
Strand	+
Gene length (bp)	899
Transcript length (bp)	843
Coding sequence length (bp)	843
Protein length (aa)	281

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 17	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	164	186	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|5340 MPYEAVALFEPRSSFSRPNQLSVLHPRHDVLSGRQVSCGNLYKPCQVSGGCLREDLICCDPYPGWCLSGVCCGLT YFYCAPAGSDCCGEKYCDPGYVCNGSTCVPKPGLDGVSTAQNSVTGTVRATVVPSALSSASSSASASSTAPPSPT ATPDSGGGTPVGAIVGGVVGGLAVIVIAVIALVWLLRSRSSRETADAPPLMGHVSTPPPGHQSLPPYALQPEATN KDYRESRFPLVDITPSAASPPQSYGAGYPLQNQPVAHEAPVQTSEHHRGQMQELA*
Coding	>Hirsu2\|5340 ATGCCGTACGAAGCAGTGGCTCTCTTCGAGCCCCGATCCAGCTTCAGTCGGCCCAACCAGTTGAGCGTCTTGCAC CCACGCCATGACGTCCTGAGCGGCCGCCAGGTCTCGTGCGGGAATTTATACAAGCCTTGCCAAGTCAGTGGTGGC TGCCTCAGGGAAGACTTGATCTGCTGTGACCCTTACCCTGGCTGGTGCCTAAGCGGCGTCTGCTGCGGCTTGACA TACTTCTACTGCGCGCCCGCCGGCTCCGATTGCTGTGGCGAGAAATACTGCGATCCCGGTTACGTCTGCAACGGG TCTACCTGCGTGCCCAAGCCCGGCCTCGACGGCGTGTCGACGGCGCAGAACTCCGTGACCGGGACGGTGCGGGCA ACTGTCGTTCCGTCGGCCTTGTCTTCCGCCTCATCCTCGGCTTCAGCCTCTTCGACTGCTCCGCCTTCTCCGACC GCTACGCCGGACAGTGGCGGCGGCACGCCGGTGGGGGCCATCGTCGGCGGCGTCGTCGGCGGCCTCGCCGTCATC GTCATCGCCGTCATCGCCCTGGTCTGGCTCCTCCGGAGCAGGTCGAGCAGGGAGACGGCGGACGCGCCTCCGCTC ATGGGCCACGTCTCCACGCCCCCCCCGGGACACCAGAGCCTGCCGCCGTACGCGTTGCAGCCCGAGGCCACGAAC AAGGATTACCGGGAATCCCGCTTCCCGCTCGTGGACATCACCCCGTCCGCCGCCAGCCCTCCGCAATCCTACGGG GCCGGCTACCCGCTGCAAAACCAGCCGGTGGCTCATGAGGCGCCGGTGCAGACTTCGGAGCACCACCGCGGACAG ATGCAGGAGCTTGCTTGA
Transcript	>Hirsu2\|5340 ATGCCGTACGAAGCAGTGGCTCTCTTCGAGCCCCGATCCAGCTTCAGTCGGCCCAACCAGTTGAGCGTCTTGCAC CCACGCCATGACGTCCTGAGCGGCCGCCAGGTCTCGTGCGGGAATTTATACAAGCCTTGCCAAGTCAGTGGTGGC TGCCTCAGGGAAGACTTGATCTGCTGTGACCCTTACCCTGGCTGGTGCCTAAGCGGCGTCTGCTGCGGCTTGACA TACTTCTACTGCGCGCCCGCCGGCTCCGATTGCTGTGGCGAGAAATACTGCGATCCCGGTTACGTCTGCAACGGG TCTACCTGCGTGCCCAAGCCCGGCCTCGACGGCGTGTCGACGGCGCAGAACTCCGTGACCGGGACGGTGCGGGCA ACTGTCGTTCCGTCGGCCTTGTCTTCCGCCTCATCCTCGGCTTCAGCCTCTTCGACTGCTCCGCCTTCTCCGACC GCTACGCCGGACAGTGGCGGCGGCACGCCGGTGGGGGCCATCGTCGGCGGCGTCGTCGGCGGCCTCGCCGTCATC GTCATCGCCGTCATCGCCCTGGTCTGGCTCCTCCGGAGCAGGTCGAGCAGGGAGACGGCGGACGCGCCTCCGCTC ATGGGCCACGTCTCCACGCCCCCCCCGGGACACCAGAGCCTGCCGCCGTACGCGTTGCAGCCCGAGGCCACGAAC AAGGATTACCGGGAATCCCGCTTCCCGCTCGTGGACATCACCCCGTCCGCCGCCAGCCCTCCGCAATCCTACGGG GCCGGCTACCCGCTGCAAAACCAGCCGGTGGCTCATGAGGCGCCGGTGCAGACTTCGGAGCACCACCGCGGACAG ATGCAGGAGCTTGCTTGA
Gene	>Hirsu2\|5340 ATGCCGTACGAAGCAGTGGCTCTCTTCGAGCCCCGATCCAGCTTCAGTCGGCCCAACCAGTTGAGCGTCTTGCAC CCACGCCATGACGTCCTGAGCGGCCGCCAGGTCTCGTGCGGGAATTTATACAAGCCTTGCCAAGGTACGTTCTCC TCACTGACGCAGAAACATGCCCGTTCTGACCCCTAAAAAAAGGAGTCAGTGGTGGCTGCCTCAGGGAAGACTTGA TCTGCTGTGACCCTTACCCTGGCTGGTGCCTAAGCGGCGTCTGCTGCGGCTTGACATACTTCTACTGCGCGCCCG CCGGCTCCGATTGCTGTGGCGAGAAATACTGCGATCCCGGTTACGTCTGCAACGGGTCTACCTGCGTGCCCAAGC CCGGCCTCGACGGCGTGTCGACGGCGCAGAACTCCGTGACCGGGACGGTGCGGGCAACTGTCGTTCCGTCGGCCT TGTCTTCCGCCTCATCCTCGGCTTCAGCCTCTTCGACTGCTCCGCCTTCTCCGACCGCTACGCCGGACAGTGGCG GCGGCACGCCGGTGGGGGCCATCGTCGGCGGCGTCGTCGGCGGCCTCGCCGTCATCGTCATCGCCGTCATCGCCC TGGTCTGGCTCCTCCGGAGCAGGTCGAGCAGGGAGACGGCGGACGCGCCTCCGCTCATGGGCCACGTCTCCACGC CCCCCCCGGGACACCAGAGCCTGCCGCCGTACGCGTTGCAGCCCGAGGCCACGAACAAGGATTACCGGGAATCCC GCTTCCCGCTCGTGGACATCACCCCGTCCGCCGCCAGCCCTCCGCAATCCTACGGGGCCGGCTACCCGCTGCAAA ACCAGCCGGTGGCTCATGAGGCGCCGGTGCAGACTTCGGAGCACCACCGCGGACAGATGCAGGAGCTTGCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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