Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5328
Gene name
LocationContig_2662:924..2118
Strand-
Gene length (bp)1194
Transcript length (bp)1194
Coding sequence length (bp)1194
Protein length (aa) 398

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P87170|DGK1_SCHPO CTP-dependent diacylglycerol kinase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ptp4 PE=3 SV=1 153 386 4.0E-53
sp|Q753I3|DGK1_ASHGO CTP-dependent diacylglycerol kinase 1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DGK1 PE=3 SV=1 156 387 4.0E-52
sp|Q12382|DGK1_YEAST CTP-dependent diacylglycerol kinase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DGK1 PE=1 SV=1 150 396 4.0E-49

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 230 249 19
2 253 275 22
3 288 310 22
4 379 396 17

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5328
MPLRRKAAVPATPRVISPSPAPSDRDGGDYVGPTTRSAVRKRMSSSQALEERSDDDDGDDEDDDLDAGAPGLRRA
RTRSRSPIDGRGKPSSRRPSSGHHQAARAKKTGVNGGEPGAGNGYLAPPQPSPVRGWSWRDFSRSPSPLGLIPIH
RHWRTFVHKHEVPRKALHLSIGFFVVWLYATGTRTSSVPPYLMAALIPIATTDWLRHRYESVNRLYVRLLGALMR
ESEYSGWNGVIFYLLGAWIVLYFLPKDVGVVSVLLLSWCDTAASTFGRLWGRYTPRIRRGKSLAGSLAAFLVGMA
TSCFFYAWLTPTFGPMPGDDDFMFKGLLALPAALVRTLGIPDGLATLTGPAALAVVSLWSGFVASASEVADVFGW
DDNLTIPVLSGLGIWAFLKLFA*
Coding >Hirsu2|5328
ATGCCGCTGCGGCGCAAGGCGGCCGTCCCCGCGACGCCCCGCGTCATCTCGCCCAGCCCGGCCCCGTCCGACCGC
GACGGCGGCGACTACGTCGGTCCGACGACGCGCTCGGCCGTCCGGAAGCGCATGTCCAGCTCGCAGGCGCTCGAG
GAGCGCAGCGACGACGATGATGGCGACGACGAAGATGATGACCTCGACGCTGGCGCGCCGGGGTTGAGGAGGGCC
CGCACGAGGAGCCGGTCCCCCATCGACGGCCGCGGCAAGCCGTCGTCGCGCCGACCGTCGTCGGGCCACCACCAG
GCGGCCAGGGCGAAGAAGACGGGCGTCAACGGGGGCGAGCCCGGCGCCGGCAACGGATACCTAGCCCCCCCGCAG
CCGTCGCCGGTGCGGGGCTGGTCGTGGCGCGACTTCAGCCGCAGCCCCAGCCCGCTCGGCCTCATCCCCATCCAC
CGGCACTGGAGGACGTTTGTGCACAAGCACGAGGTGCCGCGCAAGGCGCTGCACCTGTCCATCGGCTTCTTCGTC
GTCTGGCTCTACGCGACCGGCACGCGGACGAGCAGCGTGCCGCCGTACCTGATGGCGGCCCTGATCCCCATCGCC
ACCACGGACTGGCTGCGGCACCGGTACGAGTCCGTCAACCGGCTCTACGTCCGCCTGCTCGGCGCCCTGATGCGC
GAGAGCGAGTACTCGGGCTGGAACGGCGTCATCTTCTACCTGCTCGGCGCCTGGATCGTCCTCTACTTCCTGCCC
AAGGACGTCGGCGTCGTGAGCGTCCTGCTCCTCAGCTGGTGCGACACGGCGGCCAGCACCTTTGGCCGCCTCTGG
GGCCGCTACACGCCCAGGATCCGCCGCGGCAAGTCTCTGGCCGGCTCGCTGGCCGCCTTCCTCGTCGGCATGGCC
ACCTCGTGCTTTTTCTACGCATGGCTGACGCCGACCTTTGGGCCCATGCCGGGCGACGACGACTTCATGTTCAAG
GGCCTCCTCGCCCTGCCCGCCGCACTCGTCAGGACGCTGGGGATCCCGGACGGCCTGGCCACCCTGACGGGCCCG
GCGGCCCTCGCCGTCGTGAGCCTCTGGTCGGGCTTTGTCGCCTCTGCCAGCGAGGTGGCGGACGTGTTCGGGTGG
GACGACAACCTGACGATACCCGTCCTCAGCGGCCTCGGCATCTGGGCCTTCCTCAAGCTCTTCGCCTAA
Transcript >Hirsu2|5328
ATGCCGCTGCGGCGCAAGGCGGCCGTCCCCGCGACGCCCCGCGTCATCTCGCCCAGCCCGGCCCCGTCCGACCGC
GACGGCGGCGACTACGTCGGTCCGACGACGCGCTCGGCCGTCCGGAAGCGCATGTCCAGCTCGCAGGCGCTCGAG
GAGCGCAGCGACGACGATGATGGCGACGACGAAGATGATGACCTCGACGCTGGCGCGCCGGGGTTGAGGAGGGCC
CGCACGAGGAGCCGGTCCCCCATCGACGGCCGCGGCAAGCCGTCGTCGCGCCGACCGTCGTCGGGCCACCACCAG
GCGGCCAGGGCGAAGAAGACGGGCGTCAACGGGGGCGAGCCCGGCGCCGGCAACGGATACCTAGCCCCCCCGCAG
CCGTCGCCGGTGCGGGGCTGGTCGTGGCGCGACTTCAGCCGCAGCCCCAGCCCGCTCGGCCTCATCCCCATCCAC
CGGCACTGGAGGACGTTTGTGCACAAGCACGAGGTGCCGCGCAAGGCGCTGCACCTGTCCATCGGCTTCTTCGTC
GTCTGGCTCTACGCGACCGGCACGCGGACGAGCAGCGTGCCGCCGTACCTGATGGCGGCCCTGATCCCCATCGCC
ACCACGGACTGGCTGCGGCACCGGTACGAGTCCGTCAACCGGCTCTACGTCCGCCTGCTCGGCGCCCTGATGCGC
GAGAGCGAGTACTCGGGCTGGAACGGCGTCATCTTCTACCTGCTCGGCGCCTGGATCGTCCTCTACTTCCTGCCC
AAGGACGTCGGCGTCGTGAGCGTCCTGCTCCTCAGCTGGTGCGACACGGCGGCCAGCACCTTTGGCCGCCTCTGG
GGCCGCTACACGCCCAGGATCCGCCGCGGCAAGTCTCTGGCCGGCTCGCTGGCCGCCTTCCTCGTCGGCATGGCC
ACCTCGTGCTTTTTCTACGCATGGCTGACGCCGACCTTTGGGCCCATGCCGGGCGACGACGACTTCATGTTCAAG
GGCCTCCTCGCCCTGCCCGCCGCACTCGTCAGGACGCTGGGGATCCCGGACGGCCTGGCCACCCTGACGGGCCCG
GCGGCCCTCGCCGTCGTGAGCCTCTGGTCGGGCTTTGTCGCCTCTGCCAGCGAGGTGGCGGACGTGTTCGGGTGG
GACGACAACCTGACGATACCCGTCCTCAGCGGCCTCGGCATCTGGGCCTTCCTCAAGCTCTTCGCCTAA
Gene >Hirsu2|5328
ATGCCGCTGCGGCGCAAGGCGGCCGTCCCCGCGACGCCCCGCGTCATCTCGCCCAGCCCGGCCCCGTCCGACCGC
GACGGCGGCGACTACGTCGGTCCGACGACGCGCTCGGCCGTCCGGAAGCGCATGTCCAGCTCGCAGGCGCTCGAG
GAGCGCAGCGACGACGATGATGGCGACGACGAAGATGATGACCTCGACGCTGGCGCGCCGGGGTTGAGGAGGGCC
CGCACGAGGAGCCGGTCCCCCATCGACGGCCGCGGCAAGCCGTCGTCGCGCCGACCGTCGTCGGGCCACCACCAG
GCGGCCAGGGCGAAGAAGACGGGCGTCAACGGGGGCGAGCCCGGCGCCGGCAACGGATACCTAGCCCCCCCGCAG
CCGTCGCCGGTGCGGGGCTGGTCGTGGCGCGACTTCAGCCGCAGCCCCAGCCCGCTCGGCCTCATCCCCATCCAC
CGGCACTGGAGGACGTTTGTGCACAAGCACGAGGTGCCGCGCAAGGCGCTGCACCTGTCCATCGGCTTCTTCGTC
GTCTGGCTCTACGCGACCGGCACGCGGACGAGCAGCGTGCCGCCGTACCTGATGGCGGCCCTGATCCCCATCGCC
ACCACGGACTGGCTGCGGCACCGGTACGAGTCCGTCAACCGGCTCTACGTCCGCCTGCTCGGCGCCCTGATGCGC
GAGAGCGAGTACTCGGGCTGGAACGGCGTCATCTTCTACCTGCTCGGCGCCTGGATCGTCCTCTACTTCCTGCCC
AAGGACGTCGGCGTCGTGAGCGTCCTGCTCCTCAGCTGGTGCGACACGGCGGCCAGCACCTTTGGCCGCCTCTGG
GGCCGCTACACGCCCAGGATCCGCCGCGGCAAGTCTCTGGCCGGCTCGCTGGCCGCCTTCCTCGTCGGCATGGCC
ACCTCGTGCTTTTTCTACGCATGGCTGACGCCGACCTTTGGGCCCATGCCGGGCGACGACGACTTCATGTTCAAG
GGCCTCCTCGCCCTGCCCGCCGCACTCGTCAGGACGCTGGGGATCCCGGACGGCCTGGCCACCCTGACGGGCCCG
GCGGCCCTCGCCGTCGTGAGCCTCTGGTCGGGCTTTGTCGCCTCTGCCAGCGAGGTGGCGGACGTGTTCGGGTGG
GACGACAACCTGACGATACCCGTCCTCAGCGGCCTCGGCATCTGGGCCTTCCTCAAGCTCTTCGCCTAA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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