Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5305
Gene name
LocationContig_265:20253..21456
Strand-
Gene length (bp)1203
Transcript length (bp)1047
Coding sequence length (bp)1047
Protein length (aa) 349

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01546 Peptidase_M20 Peptidase family M20/M25/M40 5.8E-32 4 338
PF07687 M20_dimer Peptidase dimerisation domain 1.6E-05 144 239

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q53389|AMAB2_GEOSE N-carbamoyl-L-amino acid hydrolase OS=Geobacillus stearothermophilus GN=amaB PE=1 SV=1 1 338 2.0E-46
sp|P37113|AMAB1_GEOSE N-carbamoyl-L-amino acid hydrolase OS=Geobacillus stearothermophilus GN=amaB PE=1 SV=2 1 338 4.0E-44
sp|O32149|ALLC_BACSU Allantoate amidohydrolase OS=Bacillus subtilis (strain 168) GN=pucF PE=2 SV=1 1 344 7.0E-44
sp|Q2QMN7|UAH_ORYSJ Probable ureidoglycolate hydrolase OS=Oryza sativa subsp. japonica GN=UAH PE=1 SV=2 2 334 9.0E-44
sp|Q01264|HYUC_PSESN Hydantoin utilization protein C OS=Pseudomonas sp. (strain NS671) GN=hyuC PE=1 SV=1 2 341 5.0E-40
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q53389|AMAB2_GEOSE N-carbamoyl-L-amino acid hydrolase OS=Geobacillus stearothermophilus GN=amaB PE=1 SV=1 1 338 2.0E-46
sp|P37113|AMAB1_GEOSE N-carbamoyl-L-amino acid hydrolase OS=Geobacillus stearothermophilus GN=amaB PE=1 SV=2 1 338 4.0E-44
sp|O32149|ALLC_BACSU Allantoate amidohydrolase OS=Bacillus subtilis (strain 168) GN=pucF PE=2 SV=1 1 344 7.0E-44
sp|Q2QMN7|UAH_ORYSJ Probable ureidoglycolate hydrolase OS=Oryza sativa subsp. japonica GN=UAH PE=1 SV=2 2 334 9.0E-44
sp|Q01264|HYUC_PSESN Hydantoin utilization protein C OS=Pseudomonas sp. (strain NS671) GN=hyuC PE=1 SV=1 2 341 5.0E-40
sp|Q57051|Y588_HAEIN Uncharacterized hydrolase HI_0588 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0588 PE=1 SV=1 2 346 7.0E-39
sp|P77425|ALLC_ECOLI Allantoate amidohydrolase OS=Escherichia coli (strain K12) GN=allC PE=1 SV=1 1 344 3.0E-38
sp|A0QZE3|Y3995_MYCS2 Putative hydrolase MSMEG_3995/MSMEI_3903 OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=MSMEG_3995 PE=1 SV=1 2 338 9.0E-38
sp|Q8VXY9|UAH_ARATH Ureidoglycolate hydrolase OS=Arabidopsis thaliana GN=UAH PE=1 SV=1 2 334 2.0E-36
sp|O49434|AAH_ARATH Allantoate deiminase OS=Arabidopsis thaliana GN=AAH PE=1 SV=2 2 336 4.0E-33
sp|Q655X8|AAH_ORYSJ Probable allantoate deiminase OS=Oryza sativa subsp. japonica GN=AAH PE=1 SV=1 2 320 3.0E-31
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GO

GO Term Description Terminal node
GO:0016787 hydrolase activity Yes
GO:0003674 molecular_function No
GO:0003824 catalytic activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 35 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5305
MIAMGSHLDTQPNGGRYDGILGVIAAVEVLRTLSESGYETNFDIGAVNWTNEEGARFPQSAVSSAVWAGAFPFDK
ALALTDVFDPSVTLQSELDRHGFFGNVACSSHPDNGFPLAAHFELHIEQGPILERAGKRIGVVRGAQAYRWFTIT
LAGRDAHTGTTPLDARSDAILAAARCIASSNRIARGLGALASTGIIKVPRNSSTNTIASRVTFTLDIRHPDDSVL
EELQKLCFESFAKICQEDGRGVGLSWTLDTDCPSVRFDDDCIKAVEFAADKLIGPDAYMDITSGAGHDSVYASRK
CPTTMIFVPCKNGISHHPEEYCSPVDCALGTQVLLEAVVLYDQARAGN*
Coding >Hirsu2|5305
ATGATTGCCATGGGCAGCCACCTAGATACCCAGCCGAATGGGGGCAGATATGATGGAATACTGGGCGTTATTGCA
GCCGTCGAGGTACTCCGTACCTTGTCAGAGAGTGGCTATGAGACAAACTTTGACATTGGAGCCGTCAACTGGACC
AACGAGGAAGGGGCAAGATTTCCTCAGTCAGCCGTATCGTCTGCAGTGTGGGCCGGCGCCTTTCCGTTCGACAAG
GCATTGGCGCTTACAGACGTGTTTGATCCGTCTGTCACGCTCCAGTCGGAGTTGGACAGGCATGGATTTTTCGGC
AATGTGGCGTGCTCAAGCCACCCGGACAACGGCTTCCCCTTGGCCGCACATTTCGAATTGCATATCGAGCAAGGC
CCGATCCTCGAGCGAGCCGGGAAGCGCATCGGCGTCGTCCGGGGGGCACAGGCCTATCGCTGGTTTACCATTACC
TTGGCCGGCCGCGATGCCCACACGGGGACAACGCCGCTGGATGCGCGCAGCGACGCCATATTGGCAGCTGCCAGA
TGCATCGCCTCATCCAACCGCATAGCCCGAGGCCTCGGGGCTCTCGCGTCTACCGGCATCATCAAGGTTCCGCGC
AATTCTTCCACAAACACCATCGCATCTCGAGTCACTTTCACGCTGGACATCCGCCATCCGGATGACTCTGTGCTG
GAAGAGCTGCAGAAGCTCTGCTTCGAGTCCTTCGCCAAAATTTGCCAAGAGGATGGCAGGGGCGTCGGTCTGAGC
TGGACGCTAGACACCGACTGTCCGTCTGTGAGGTTCGACGATGACTGCATCAAGGCTGTCGAGTTCGCAGCCGAC
AAGCTGATAGGCCCTGATGCTTACATGGATATCACCTCCGGAGCCGGACACGATAGCGTTTACGCGAGCCGTAAA
TGCCCTACCACCATGATTTTCGTGCCCTGCAAGAACGGCATCAGTCACCACCCAGAAGAGTATTGCAGCCCCGTG
GACTGCGCTCTCGGTACCCAAGTCCTGCTCGAGGCTGTCGTCCTTTATGACCAGGCCAGAGCGGGAAACTAA
Transcript >Hirsu2|5305
ATGATTGCCATGGGCAGCCACCTAGATACCCAGCCGAATGGGGGCAGATATGATGGAATACTGGGCGTTATTGCA
GCCGTCGAGGTACTCCGTACCTTGTCAGAGAGTGGCTATGAGACAAACTTTGACATTGGAGCCGTCAACTGGACC
AACGAGGAAGGGGCAAGATTTCCTCAGTCAGCCGTATCGTCTGCAGTGTGGGCCGGCGCCTTTCCGTTCGACAAG
GCATTGGCGCTTACAGACGTGTTTGATCCGTCTGTCACGCTCCAGTCGGAGTTGGACAGGCATGGATTTTTCGGC
AATGTGGCGTGCTCAAGCCACCCGGACAACGGCTTCCCCTTGGCCGCACATTTCGAATTGCATATCGAGCAAGGC
CCGATCCTCGAGCGAGCCGGGAAGCGCATCGGCGTCGTCCGGGGGGCACAGGCCTATCGCTGGTTTACCATTACC
TTGGCCGGCCGCGATGCCCACACGGGGACAACGCCGCTGGATGCGCGCAGCGACGCCATATTGGCAGCTGCCAGA
TGCATCGCCTCATCCAACCGCATAGCCCGAGGCCTCGGGGCTCTCGCGTCTACCGGCATCATCAAGGTTCCGCGC
AATTCTTCCACAAACACCATCGCATCTCGAGTCACTTTCACGCTGGACATCCGCCATCCGGATGACTCTGTGCTG
GAAGAGCTGCAGAAGCTCTGCTTCGAGTCCTTCGCCAAAATTTGCCAAGAGGATGGCAGGGGCGTCGGTCTGAGC
TGGACGCTAGACACCGACTGTCCGTCTGTGAGGTTCGACGATGACTGCATCAAGGCTGTCGAGTTCGCAGCCGAC
AAGCTGATAGGCCCTGATGCTTACATGGATATCACCTCCGGAGCCGGACACGATAGCGTTTACGCGAGCCGTAAA
TGCCCTACCACCATGATTTTCGTGCCCTGCAAGAACGGCATCAGTCACCACCCAGAAGAGTATTGCAGCCCCGTG
GACTGCGCTCTCGGTACCCAAGTCCTGCTCGAGGCTGTCGTCCTTTATGACCAGGCCAGAGCGGGAAACTAA
Gene >Hirsu2|5305
ATGATTGCCATGGGCAGCCACCTAGATACCCAGCCGAATGGGGGCAGATATGATGGAATACTGGGCGTTATTGCA
GCCGTCGAGGTACTCCGTACCTTGTCAGAGAGTGGCTATGAGACAAACTTTGACATTGGAGCCGTCAACTGGACC
AAGTGCGAGAATCCCGTCTTACTCTGTCGAAAAGATAGACATCCGGGCACTAACTCCGAAATCGTCACTCACGTG
CAGCGAGGAAGGGGCAAGATTTCCTCAGTCAGCCGTATCGTCTGCAGTGTGGGCCGGCGCCTTTCCGTTCGACAA
GGCATTGGCGCTTACAGACGTGTTTGATCCGTCTGTCACGCTCCAGTCGGAGTTGGACAGGCATGGATTTTTCGG
CAATGTGGCGTGCTCAAGCCACCCGGACAACGGCTTCCCCTTGGCCGCACATTTCGAATTGCATATCGAGCAAGG
CCCGATCCTCGAGCGAGCCGGGAAGCGCATCGGCGTCGTCCGGGGGGCACAGGCCTATCGCTGGTTTACCATTAC
CTTGGCCGGCCGCGATGCCCACACGGGGACAACGCCGCTGGATGCGCGCAGCGACGCCATATTGGCAGCTGCCAG
ATGCATCGCCTCATCCAACCGCATAGCCCGAGGCCTCGGGGCTCTCGCGTCTACCGGCATCATCAAGGTTCCGCG
CAATTCTTCCACAAACACCATCGCATCTCGAGTCACTTTCACGCTGGACATCCGCCATCCGGATGACTCTGTGCT
GGAAGAGCTGCAGAAGCTCTGCTTCGAGTCCTTCGCCAAAATTTGCCAAGAGGATGGCAGGGGCGTCGGTCTGAG
CTGGACGCTAGACACCGACTGTCCGTCTGTGAGGTTCGACGATGACTGCATCAAGGCTGTCGAGTTCGCAGCCGA
CAAGCTGATAGGCCCTGATGCTTACATGGATATCACCTCCGGAGCCGGACACGATAGCGTTTACGCGAGCCGTAA
ATGCCCTACCACCATGATTTTCGTGCCCTGCAAGAACGGCATCAGTCACCACCCAGAAGAGTATTGCAGCCCCGT
GGACTGGTACGTTGCGACTTGGCGAACCCATCCATTTACCGCTCTCCACAGTCAAACCAGGTTTGATTGACTAAA
GAAAACTGCAGCGCTCTCGGTACCCAAGTCCTGCTCGAGGCTGTCGTCCTTTATGACCAGGCCAGAGCGGGAAAC
TAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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