© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|5305 |
| Gene name | |
| Location | Contig_265:20253..21456 |
| Strand | - |
| Gene length (bp) | 1203 |
| Transcript length (bp) | 1047 |
| Coding sequence length (bp) | 1047 |
| Protein length (aa) | 349 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01546 | Peptidase_M20 | Peptidase family M20/M25/M40 | 5.8E-32 | 4 | 338 |
| PF07687 | M20_dimer | Peptidase dimerisation domain | 1.6E-05 | 144 | 239 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q53389|AMAB2_GEOSE | N-carbamoyl-L-amino acid hydrolase OS=Geobacillus stearothermophilus GN=amaB PE=1 SV=1 | 1 | 338 | 2.0E-46 |
| sp|P37113|AMAB1_GEOSE | N-carbamoyl-L-amino acid hydrolase OS=Geobacillus stearothermophilus GN=amaB PE=1 SV=2 | 1 | 338 | 4.0E-44 |
| sp|O32149|ALLC_BACSU | Allantoate amidohydrolase OS=Bacillus subtilis (strain 168) GN=pucF PE=2 SV=1 | 1 | 344 | 7.0E-44 |
| sp|Q2QMN7|UAH_ORYSJ | Probable ureidoglycolate hydrolase OS=Oryza sativa subsp. japonica GN=UAH PE=1 SV=2 | 2 | 334 | 9.0E-44 |
| sp|Q01264|HYUC_PSESN | Hydantoin utilization protein C OS=Pseudomonas sp. (strain NS671) GN=hyuC PE=1 SV=1 | 2 | 341 | 5.0E-40 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q53389|AMAB2_GEOSE | N-carbamoyl-L-amino acid hydrolase OS=Geobacillus stearothermophilus GN=amaB PE=1 SV=1 | 1 | 338 | 2.0E-46 |
| sp|P37113|AMAB1_GEOSE | N-carbamoyl-L-amino acid hydrolase OS=Geobacillus stearothermophilus GN=amaB PE=1 SV=2 | 1 | 338 | 4.0E-44 |
| sp|O32149|ALLC_BACSU | Allantoate amidohydrolase OS=Bacillus subtilis (strain 168) GN=pucF PE=2 SV=1 | 1 | 344 | 7.0E-44 |
| sp|Q2QMN7|UAH_ORYSJ | Probable ureidoglycolate hydrolase OS=Oryza sativa subsp. japonica GN=UAH PE=1 SV=2 | 2 | 334 | 9.0E-44 |
| sp|Q01264|HYUC_PSESN | Hydantoin utilization protein C OS=Pseudomonas sp. (strain NS671) GN=hyuC PE=1 SV=1 | 2 | 341 | 5.0E-40 |
| sp|Q57051|Y588_HAEIN | Uncharacterized hydrolase HI_0588 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0588 PE=1 SV=1 | 2 | 346 | 7.0E-39 |
| sp|P77425|ALLC_ECOLI | Allantoate amidohydrolase OS=Escherichia coli (strain K12) GN=allC PE=1 SV=1 | 1 | 344 | 3.0E-38 |
| sp|A0QZE3|Y3995_MYCS2 | Putative hydrolase MSMEG_3995/MSMEI_3903 OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=MSMEG_3995 PE=1 SV=1 | 2 | 338 | 9.0E-38 |
| sp|Q8VXY9|UAH_ARATH | Ureidoglycolate hydrolase OS=Arabidopsis thaliana GN=UAH PE=1 SV=1 | 2 | 334 | 2.0E-36 |
| sp|O49434|AAH_ARATH | Allantoate deiminase OS=Arabidopsis thaliana GN=AAH PE=1 SV=2 | 2 | 336 | 4.0E-33 |
| sp|Q655X8|AAH_ORYSJ | Probable allantoate deiminase OS=Oryza sativa subsp. japonica GN=AAH PE=1 SV=1 | 2 | 320 | 3.0E-31 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016787 | hydrolase activity | Yes |
| GO:0003674 | molecular_function | No |
| GO:0003824 | catalytic activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 35 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|5305 MIAMGSHLDTQPNGGRYDGILGVIAAVEVLRTLSESGYETNFDIGAVNWTNEEGARFPQSAVSSAVWAGAFPFDK ALALTDVFDPSVTLQSELDRHGFFGNVACSSHPDNGFPLAAHFELHIEQGPILERAGKRIGVVRGAQAYRWFTIT LAGRDAHTGTTPLDARSDAILAAARCIASSNRIARGLGALASTGIIKVPRNSSTNTIASRVTFTLDIRHPDDSVL EELQKLCFESFAKICQEDGRGVGLSWTLDTDCPSVRFDDDCIKAVEFAADKLIGPDAYMDITSGAGHDSVYASRK CPTTMIFVPCKNGISHHPEEYCSPVDCALGTQVLLEAVVLYDQARAGN* |
| Coding | >Hirsu2|5305 ATGATTGCCATGGGCAGCCACCTAGATACCCAGCCGAATGGGGGCAGATATGATGGAATACTGGGCGTTATTGCA GCCGTCGAGGTACTCCGTACCTTGTCAGAGAGTGGCTATGAGACAAACTTTGACATTGGAGCCGTCAACTGGACC AACGAGGAAGGGGCAAGATTTCCTCAGTCAGCCGTATCGTCTGCAGTGTGGGCCGGCGCCTTTCCGTTCGACAAG GCATTGGCGCTTACAGACGTGTTTGATCCGTCTGTCACGCTCCAGTCGGAGTTGGACAGGCATGGATTTTTCGGC AATGTGGCGTGCTCAAGCCACCCGGACAACGGCTTCCCCTTGGCCGCACATTTCGAATTGCATATCGAGCAAGGC CCGATCCTCGAGCGAGCCGGGAAGCGCATCGGCGTCGTCCGGGGGGCACAGGCCTATCGCTGGTTTACCATTACC TTGGCCGGCCGCGATGCCCACACGGGGACAACGCCGCTGGATGCGCGCAGCGACGCCATATTGGCAGCTGCCAGA TGCATCGCCTCATCCAACCGCATAGCCCGAGGCCTCGGGGCTCTCGCGTCTACCGGCATCATCAAGGTTCCGCGC AATTCTTCCACAAACACCATCGCATCTCGAGTCACTTTCACGCTGGACATCCGCCATCCGGATGACTCTGTGCTG GAAGAGCTGCAGAAGCTCTGCTTCGAGTCCTTCGCCAAAATTTGCCAAGAGGATGGCAGGGGCGTCGGTCTGAGC TGGACGCTAGACACCGACTGTCCGTCTGTGAGGTTCGACGATGACTGCATCAAGGCTGTCGAGTTCGCAGCCGAC AAGCTGATAGGCCCTGATGCTTACATGGATATCACCTCCGGAGCCGGACACGATAGCGTTTACGCGAGCCGTAAA TGCCCTACCACCATGATTTTCGTGCCCTGCAAGAACGGCATCAGTCACCACCCAGAAGAGTATTGCAGCCCCGTG GACTGCGCTCTCGGTACCCAAGTCCTGCTCGAGGCTGTCGTCCTTTATGACCAGGCCAGAGCGGGAAACTAA |
| Transcript | >Hirsu2|5305 ATGATTGCCATGGGCAGCCACCTAGATACCCAGCCGAATGGGGGCAGATATGATGGAATACTGGGCGTTATTGCA GCCGTCGAGGTACTCCGTACCTTGTCAGAGAGTGGCTATGAGACAAACTTTGACATTGGAGCCGTCAACTGGACC AACGAGGAAGGGGCAAGATTTCCTCAGTCAGCCGTATCGTCTGCAGTGTGGGCCGGCGCCTTTCCGTTCGACAAG GCATTGGCGCTTACAGACGTGTTTGATCCGTCTGTCACGCTCCAGTCGGAGTTGGACAGGCATGGATTTTTCGGC AATGTGGCGTGCTCAAGCCACCCGGACAACGGCTTCCCCTTGGCCGCACATTTCGAATTGCATATCGAGCAAGGC CCGATCCTCGAGCGAGCCGGGAAGCGCATCGGCGTCGTCCGGGGGGCACAGGCCTATCGCTGGTTTACCATTACC TTGGCCGGCCGCGATGCCCACACGGGGACAACGCCGCTGGATGCGCGCAGCGACGCCATATTGGCAGCTGCCAGA TGCATCGCCTCATCCAACCGCATAGCCCGAGGCCTCGGGGCTCTCGCGTCTACCGGCATCATCAAGGTTCCGCGC AATTCTTCCACAAACACCATCGCATCTCGAGTCACTTTCACGCTGGACATCCGCCATCCGGATGACTCTGTGCTG GAAGAGCTGCAGAAGCTCTGCTTCGAGTCCTTCGCCAAAATTTGCCAAGAGGATGGCAGGGGCGTCGGTCTGAGC TGGACGCTAGACACCGACTGTCCGTCTGTGAGGTTCGACGATGACTGCATCAAGGCTGTCGAGTTCGCAGCCGAC AAGCTGATAGGCCCTGATGCTTACATGGATATCACCTCCGGAGCCGGACACGATAGCGTTTACGCGAGCCGTAAA TGCCCTACCACCATGATTTTCGTGCCCTGCAAGAACGGCATCAGTCACCACCCAGAAGAGTATTGCAGCCCCGTG GACTGCGCTCTCGGTACCCAAGTCCTGCTCGAGGCTGTCGTCCTTTATGACCAGGCCAGAGCGGGAAACTAA |
| Gene | >Hirsu2|5305 ATGATTGCCATGGGCAGCCACCTAGATACCCAGCCGAATGGGGGCAGATATGATGGAATACTGGGCGTTATTGCA GCCGTCGAGGTACTCCGTACCTTGTCAGAGAGTGGCTATGAGACAAACTTTGACATTGGAGCCGTCAACTGGACC AAGTGCGAGAATCCCGTCTTACTCTGTCGAAAAGATAGACATCCGGGCACTAACTCCGAAATCGTCACTCACGTG CAGCGAGGAAGGGGCAAGATTTCCTCAGTCAGCCGTATCGTCTGCAGTGTGGGCCGGCGCCTTTCCGTTCGACAA GGCATTGGCGCTTACAGACGTGTTTGATCCGTCTGTCACGCTCCAGTCGGAGTTGGACAGGCATGGATTTTTCGG CAATGTGGCGTGCTCAAGCCACCCGGACAACGGCTTCCCCTTGGCCGCACATTTCGAATTGCATATCGAGCAAGG CCCGATCCTCGAGCGAGCCGGGAAGCGCATCGGCGTCGTCCGGGGGGCACAGGCCTATCGCTGGTTTACCATTAC CTTGGCCGGCCGCGATGCCCACACGGGGACAACGCCGCTGGATGCGCGCAGCGACGCCATATTGGCAGCTGCCAG ATGCATCGCCTCATCCAACCGCATAGCCCGAGGCCTCGGGGCTCTCGCGTCTACCGGCATCATCAAGGTTCCGCG CAATTCTTCCACAAACACCATCGCATCTCGAGTCACTTTCACGCTGGACATCCGCCATCCGGATGACTCTGTGCT GGAAGAGCTGCAGAAGCTCTGCTTCGAGTCCTTCGCCAAAATTTGCCAAGAGGATGGCAGGGGCGTCGGTCTGAG CTGGACGCTAGACACCGACTGTCCGTCTGTGAGGTTCGACGATGACTGCATCAAGGCTGTCGAGTTCGCAGCCGA CAAGCTGATAGGCCCTGATGCTTACATGGATATCACCTCCGGAGCCGGACACGATAGCGTTTACGCGAGCCGTAA ATGCCCTACCACCATGATTTTCGTGCCCTGCAAGAACGGCATCAGTCACCACCCAGAAGAGTATTGCAGCCCCGT GGACTGGTACGTTGCGACTTGGCGAACCCATCCATTTACCGCTCTCCACAGTCAAACCAGGTTTGATTGACTAAA GAAAACTGCAGCGCTCTCGGTACCCAAGTCCTGCTCGAGGCTGTCGTCCTTTATGACCAGGCCAGAGCGGGAAAC TAA |