Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|53
Gene name
LocationContig_1004:3311..5067
Strand+
Gene length (bp)1756
Transcript length (bp)1422
Coding sequence length (bp)1422
Protein length (aa) 474

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13621 Cupin_8 Cupin-like domain 1.1E-13 254 372
PF02373 JmjC JmjC domain, hydroxylase 6.8E-11 265 375
PF12937 F-box-like F-box-like 1.1E-07 35 80
PF00646 F-box F-box domain 3.6E-06 35 76

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q67XX3|FB252_ARATH F-box protein At5g06550 OS=Arabidopsis thaliana GN=At5g06550 PE=2 SV=1 8 426 4.0E-82
sp|Q9M9E8|FB92_ARATH F-box protein At1g78280 OS=Arabidopsis thaliana GN=At1g78280 PE=2 SV=3 31 376 3.0E-55
sp|Q6Q4H1|JMJD6_HYDVU Bifunctional arginine demethylase and lysyl-hydroxylase PSR OS=Hydra vulgaris GN=PSR PE=1 SV=1 143 375 4.0E-39
sp|Q5R6G2|JMJD6_PONAB Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 OS=Pongo abelii GN=JMJD6 PE=2 SV=1 150 376 1.0E-38
sp|Q6NYC1|JMJD6_HUMAN Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 OS=Homo sapiens GN=JMJD6 PE=1 SV=1 150 376 1.0E-38
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Swissprot ID Swissprot Description Start End E-value
sp|Q67XX3|FB252_ARATH F-box protein At5g06550 OS=Arabidopsis thaliana GN=At5g06550 PE=2 SV=1 8 426 4.0E-82
sp|Q9M9E8|FB92_ARATH F-box protein At1g78280 OS=Arabidopsis thaliana GN=At1g78280 PE=2 SV=3 31 376 3.0E-55
sp|Q6Q4H1|JMJD6_HYDVU Bifunctional arginine demethylase and lysyl-hydroxylase PSR OS=Hydra vulgaris GN=PSR PE=1 SV=1 143 375 4.0E-39
sp|Q5R6G2|JMJD6_PONAB Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 OS=Pongo abelii GN=JMJD6 PE=2 SV=1 150 376 1.0E-38
sp|Q6NYC1|JMJD6_HUMAN Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 OS=Homo sapiens GN=JMJD6 PE=1 SV=1 150 376 1.0E-38
sp|Q58DS6|JMJD6_BOVIN Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 OS=Bos taurus GN=JMJD6 PE=2 SV=1 105 376 2.0E-38
sp|Q5ZMK5|JMJD6_CHICK Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 OS=Gallus gallus GN=JMJD6 PE=2 SV=1 150 376 1.0E-37
sp|Q6AYK2|JMJD6_RAT Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 OS=Rattus norvegicus GN=Jmjd6 PE=2 SV=2 150 376 1.0E-37
sp|Q9ERI5|JMJD6_MOUSE Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 OS=Mus musculus GN=Jmjd6 PE=1 SV=2 150 376 1.0E-37
sp|Q6PFM0|JMJD6_DANRE Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 OS=Danio rerio GN=jmjd6 PE=2 SV=2 148 376 3.0E-37
sp|Q6GND3|JMD6A_XENLA Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6-A OS=Xenopus laevis GN=jmjd6-a PE=2 SV=1 151 379 4.0E-37
sp|Q7ZX37|JMD6B_XENLA Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6-B OS=Xenopus laevis GN=jmjd6-b PE=2 SV=1 150 379 7.0E-37
sp|Q9VD28|JMJD6_DROME Bifunctional arginine demethylase and lysyl-hydroxylase PSR OS=Drosophila melanogaster GN=PSR PE=2 SV=1 155 375 6.0E-35
sp|Q9GYI4|JMJD6_CAEEL Bifunctional arginine demethylase and lysyl-hydroxylase psr-1 OS=Caenorhabditis elegans GN=psr-1 PE=1 SV=2 149 375 9.0E-35
sp|Q623U2|JMJD6_CAEBR Bifunctional arginine demethylase and lysyl-hydroxylase psr-1 OS=Caenorhabditis briggsae GN=psr-1 PE=3 SV=1 123 375 1.0E-34
sp|Q9VJ97|JMJD4_DROME JmjC domain-containing protein 4 homolog OS=Drosophila melanogaster GN=CG7200 PE=2 SV=1 103 375 3.0E-11
sp|Q08BY5|JMJD4_DANRE JmjC domain-containing protein 4 OS=Danio rerio GN=jmjd4 PE=2 SV=1 263 408 7.0E-09
sp|Q5ZHV5|JMJD4_CHICK JmjC domain-containing protein 4 OS=Gallus gallus GN=JMJD4 PE=2 SV=1 263 376 1.0E-07
sp|Q8BFT6|JMJD4_MOUSE JmjC domain-containing protein 4 OS=Mus musculus GN=Jmjd4 PE=2 SV=1 263 376 3.0E-07
sp|Q5RHD1|KDM7A_DANRE Lysine-specific demethylase 7A OS=Danio rerio GN=kdm7a PE=2 SV=2 242 376 4.0E-07
sp|Q9H9V9|JMJD4_HUMAN JmjC domain-containing protein 4 OS=Homo sapiens GN=JMJD4 PE=1 SV=2 263 376 7.0E-07
sp|P0CF52|KDM7B_DANRE Lysine-specific demethylase 7B OS=Danio rerio GN=jhdm1db PE=2 SV=1 242 376 8.0E-07
sp|Q3UWM4|KDM7A_MOUSE Lysine-specific demethylase 7A OS=Mus musculus GN=Kdm7a PE=2 SV=2 242 376 4.0E-06
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GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0003674 molecular_function No
GO:0005488 binding No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.3202 0.9094 0.0309 0.0167 0.085 0.0251 0.1146 0.019 0.0721 0.0095

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5365
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6086
Ophiocordyceps australis map64 (Brazil) OphauB2|7660
Ophiocordyceps camponoti-floridani Ophcf2|00404
Ophiocordyceps camponoti-rufipedis Ophun1|3976
Ophiocordyceps kimflemingae Ophio5|6346
Ophiocordyceps subramaniannii Hirsu2|53 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|53
MDGADSIPSHPLRVKPLGNRFLCSGPNARAGLGAWHALPDEVLMAVLEHSGQTDLLRLGSSCKFLYAFCHSDELW
KAICLQLPKERSHSLQWHGSWRRTVLGLPRDREACIDCGNVFSDVLHRPFACTNVNLAQYVAGIPKVNLMPRLDS
LTYDEFAERWTERPFILAKCIQEWPVCSLWTIDSLLRDYPDVEFRAEAVDWSLARYCRYMGENRDESPLYLFDRK
FADKMKITVGREAGAAYWRPDCFGPDLFEVLGEERPAHRWLIVGPERSGSTFHKDPNGTSAWNAVIQGAKYWIMF
PPTACVPGVYVSSDSSEVTSPLSIAEWLLTFHDEARRLPTCVEGVCRAGEMVHVPSGWWHLVVNLESGIALTQNF
VPLSPSLKLVSEVLSFLRDKADQVSGFSRAVEKPYELFVERLRQAYPDVLETALDMVDRKSGKKRKWDTAVGRNA
EAEGGAGFSFGFGCGDDDDDEIP*
Coding >Hirsu2|53
ATGGACGGCGCCGACTCGATCCCCTCGCATCCTCTCCGGGTCAAGCCCCTTGGAAACCGCTTCCTGTGCAGCGGC
CCCAACGCCCGGGCCGGCCTCGGCGCGTGGCATGCACTCCCAGACGAGGTGCTCATGGCCGTGCTGGAGCACTCC
GGCCAGACGGACCTCCTCCGCCTCGGCTCCTCATGCAAATTTCTCTACGCCTTTTGTCACTCGGACGAGCTGTGG
AAGGCTATATGTCTCCAGTTGCCAAAGGAGCGTAGCCACTCACTCCAATGGCATGGGTCTTGGAGACGCACCGTC
CTGGGCTTGCCGCGAGACCGAGAGGCCTGCATTGACTGCGGCAACGTCTTTTCCGACGTCCTGCACCGGCCCTTT
GCCTGCACCAATGTCAACCTGGCTCAGTACGTCGCCGGCATCCCCAAGGTAAACCTGATGCCACGCCTCGACAGC
CTCACCTACGATGAGTTCGCCGAGCGGTGGACAGAACGGCCGTTCATCCTGGCCAAGTGCATCCAGGAATGGCCC
GTCTGCTCCCTCTGGACCATCGACAGCCTGCTCCGGGACTACCCGGACGTCGAGTTCCGAGCCGAGGCCGTGGAT
TGGTCCCTTGCGCGATACTGCCGCTACATGGGCGAGAACAGGGACGAGAGCCCGCTGTACCTGTTTGACCGCAAG
TTTGCCGACAAGATGAAGATCACGGTCGGTCGCGAGGCCGGCGCAGCGTACTGGCGCCCCGATTGCTTCGGCCCA
GACCTGTTTGAGGTGTTGGGCGAGGAGCGGCCGGCCCATCGGTGGCTGATTGTCGGCCCCGAACGCAGCGGCTCG
ACCTTTCACAAAGACCCCAACGGCACGAGCGCCTGGAACGCCGTGATCCAGGGGGCCAAGTATTGGATCATGTTC
CCCCCGACAGCGTGCGTGCCGGGCGTCTACGTGTCGTCGGACAGCAGCGAGGTGACGAGTCCGCTGAGCATCGCC
GAGTGGCTGCTCACCTTCCACGACGAGGCACGCCGGCTGCCGACGTGTGTCGAAGGCGTCTGCCGCGCCGGGGAG
ATGGTCCACGTCCCGAGCGGGTGGTGGCACCTCGTGGTGAACCTGGAGAGCGGCATCGCCCTGACGCAGAATTTC
GTCCCCCTGTCGCCGAGCCTGAAGCTCGTCTCCGAGGTGCTCTCCTTTCTGCGGGACAAGGCGGACCAAGTGTCG
GGCTTCTCGCGCGCGGTCGAGAAGCCGTACGAGCTCTTCGTCGAGAGACTACGGCAAGCGTACCCGGACGTCCTC
GAGACGGCCCTGGACATGGTGGACAGGAAGAGCGGCAAGAAGCGCAAGTGGGACACGGCGGTCGGGCGAAACGCA
GAGGCGGAGGGAGGCGCAGGCTTCAGTTTCGGGTTCGGCTGCGGCGACGACGACGACGACGAAATACCGTGA
Transcript >Hirsu2|53
ATGGACGGCGCCGACTCGATCCCCTCGCATCCTCTCCGGGTCAAGCCCCTTGGAAACCGCTTCCTGTGCAGCGGC
CCCAACGCCCGGGCCGGCCTCGGCGCGTGGCATGCACTCCCAGACGAGGTGCTCATGGCCGTGCTGGAGCACTCC
GGCCAGACGGACCTCCTCCGCCTCGGCTCCTCATGCAAATTTCTCTACGCCTTTTGTCACTCGGACGAGCTGTGG
AAGGCTATATGTCTCCAGTTGCCAAAGGAGCGTAGCCACTCACTCCAATGGCATGGGTCTTGGAGACGCACCGTC
CTGGGCTTGCCGCGAGACCGAGAGGCCTGCATTGACTGCGGCAACGTCTTTTCCGACGTCCTGCACCGGCCCTTT
GCCTGCACCAATGTCAACCTGGCTCAGTACGTCGCCGGCATCCCCAAGGTAAACCTGATGCCACGCCTCGACAGC
CTCACCTACGATGAGTTCGCCGAGCGGTGGACAGAACGGCCGTTCATCCTGGCCAAGTGCATCCAGGAATGGCCC
GTCTGCTCCCTCTGGACCATCGACAGCCTGCTCCGGGACTACCCGGACGTCGAGTTCCGAGCCGAGGCCGTGGAT
TGGTCCCTTGCGCGATACTGCCGCTACATGGGCGAGAACAGGGACGAGAGCCCGCTGTACCTGTTTGACCGCAAG
TTTGCCGACAAGATGAAGATCACGGTCGGTCGCGAGGCCGGCGCAGCGTACTGGCGCCCCGATTGCTTCGGCCCA
GACCTGTTTGAGGTGTTGGGCGAGGAGCGGCCGGCCCATCGGTGGCTGATTGTCGGCCCCGAACGCAGCGGCTCG
ACCTTTCACAAAGACCCCAACGGCACGAGCGCCTGGAACGCCGTGATCCAGGGGGCCAAGTATTGGATCATGTTC
CCCCCGACAGCGTGCGTGCCGGGCGTCTACGTGTCGTCGGACAGCAGCGAGGTGACGAGTCCGCTGAGCATCGCC
GAGTGGCTGCTCACCTTCCACGACGAGGCACGCCGGCTGCCGACGTGTGTCGAAGGCGTCTGCCGCGCCGGGGAG
ATGGTCCACGTCCCGAGCGGGTGGTGGCACCTCGTGGTGAACCTGGAGAGCGGCATCGCCCTGACGCAGAATTTC
GTCCCCCTGTCGCCGAGCCTGAAGCTCGTCTCCGAGGTGCTCTCCTTTCTGCGGGACAAGGCGGACCAAGTGTCG
GGCTTCTCGCGCGCGGTCGAGAAGCCGTACGAGCTCTTCGTCGAGAGACTACGGCAAGCGTACCCGGACGTCCTC
GAGACGGCCCTGGACATGGTGGACAGGAAGAGCGGCAAGAAGCGCAAGTGGGACACGGCGGTCGGGCGAAACGCA
GAGGCGGAGGGAGGCGCAGGCTTCAGTTTCGGGTTCGGCTGCGGCGACGACGACGACGACGAAATACCGTGA
Gene >Hirsu2|53
ATGGACGGCGCCGACTCGATCCCCTCGCATCCTCTCCGGGTCAAGCCCCTTGGAAACCGCTTCCTGTGCAGCGGC
CCCAACGCCCGGGCCGGCCTCGGCGCGTGGCATGCACTCCCAGACGAGGTGCTCATGGCCGTGCTGGAGCACTCC
GGCCAGACGGACCTCCTCCGCCTCGGCTCCTCATGCAAATTTCTCTACGCCTTTTGTCACTCGGACGAGCTGTGG
AAGGCTATATGTCTCCAGTGAGTTCTCTCTGCTCGTGCCATCCGCCGCTCCGTCTTCATCCGCCGCTCTGCGTCG
ACCCTAAGGCCCGCCTCCTGTCTGGAGCAGACAGTCCAGCGGGGACAGCACGACGAGGCAGGGTCAGGCCGCTCG
CTGGCTGGACAAGGTCATCCGCGCGAGGAATCGTGATGCCCGTCGCCCTTGTTGCGGGCGGCTCTAGTAGACGAG
CTTCCACCGCTTCGGCGATACTCGTACTTGTGGCTTTCCCCTGCAGCAACCGCTCCTCATTTTGTCCTAACGCTC
GCAAGCTCCCCCCCCTGTATGGCCTCGCGTGACTGACTGGGCACCAATCAGGTTGCCAAAGGAGCGTAGCCACTC
ACTCCAATGGCATGGGTCTTGGAGACGCACCGTCCTGGGCTTGCCGCGAGACCGAGAGGCCTGCATTGACTGCGG
CAACGTCTTTTCCGACGTCCTGCACCGGCCCTTTGCCTGCACCAATGTCAACCTGGCTCAGTACGTCGCCGGCAT
CCCCAAGGTAAACCTGATGCCACGCCTCGACAGCCTCACCTACGATGAGTTCGCCGAGCGGTGGACAGAACGGCC
GTTCATCCTGGCCAAGTGCATCCAGGAATGGCCCGTCTGCTCCCTCTGGACCATCGACAGCCTGCTCCGGGACTA
CCCGGACGTCGAGTTCCGAGCCGAGGCCGTGGATTGGTCCCTTGCGCGATACTGCCGCTACATGGGCGAGAACAG
GGACGAGAGCCCGCTGTACCTGTTTGACCGCAAGTTTGCCGACAAGATGAAGATCACGGTCGGTCGCGAGGCCGG
CGCAGCGTACTGGCGCCCCGATTGCTTCGGCCCAGACCTGTTTGAGGTGTTGGGCGAGGAGCGGCCGGCCCATCG
GTGGCTGATTGTCGGCCCCGAACGCAGCGGCTCGACCTTTCACAAAGACCCCAACGGCACGAGCGCCTGGAACGC
CGTGATCCAGGGGGCCAAGTATTGGATCATGTTCCCCCCGACAGCGTGCGTGCCGGGCGTCTACGTGTCGTCGGA
CAGCAGCGAGGTGACGAGTCCGCTGAGCATCGCCGAGTGGCTGCTCACCTTCCACGACGAGGCACGCCGGCTGCC
GACGTGTGTCGAAGGCGTCTGCCGCGCCGGGGAGATGGTCCACGTCCCGAGCGGGTGGTGGCACCTCGTGGTGAA
CCTGGAGAGCGGCATCGCCCTGACGCAGAATTTCGTCCCCCTGTCGCCGAGCCTGAAGCTCGTCTCCGAGGTGCT
CTCCTTTCTGCGGGACAAGGCGGACCAAGTGTCGGGCTTCTCGCGCGCGGTCGAGAAGCCGTACGAGCTCTTCGT
CGAGAGACTACGGCAAGCGTACCCGGACGTCCTCGAGACGGCCCTGGACATGGTGGACAGGAAGAGCGGCAAGAA
GCGCAAGTGGGACACGGCGGTCGGGCGAAACGCAGAGGCGGAGGGAGGCGCAGGCTTCAGTTTCGGGTTCGGCTG
CGGCGACGACGACGACGACGAAATACCGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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