Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5291
Gene name
LocationContig_264:23794..25030
Strand+
Gene length (bp)1236
Transcript length (bp)1026
Coding sequence length (bp)1026
Protein length (aa) 342

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01151 ELO GNS1/SUR4 family 1.2E-60 52 293

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9UTF7|ELOH1_SCHPO Putative elongation of fatty acids protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B2.03c PE=1 SV=1 14 299 1.0E-110
sp|P25358|ELO2_YEAST Elongation of fatty acids protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ELO2 PE=1 SV=1 13 339 1.0E-108
sp|P40319|ELO3_YEAST Elongation of fatty acids protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ELO3 PE=1 SV=1 1 341 3.0E-101
sp|P39540|ELO1_YEAST Elongation of fatty acids protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ELO1 PE=1 SV=1 14 298 5.0E-99
sp|Q7LKX0|ELOH2_SCHPO Putative elongation of fatty acids protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1639.01c PE=3 SV=3 24 337 3.0E-83
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Swissprot ID Swissprot Description Start End E-value
sp|Q9UTF7|ELOH1_SCHPO Putative elongation of fatty acids protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B2.03c PE=1 SV=1 14 299 1.0E-110
sp|P25358|ELO2_YEAST Elongation of fatty acids protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ELO2 PE=1 SV=1 13 339 1.0E-108
sp|P40319|ELO3_YEAST Elongation of fatty acids protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ELO3 PE=1 SV=1 1 341 3.0E-101
sp|P39540|ELO1_YEAST Elongation of fatty acids protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ELO1 PE=1 SV=1 14 298 5.0E-99
sp|Q7LKX0|ELOH2_SCHPO Putative elongation of fatty acids protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1639.01c PE=3 SV=3 24 337 3.0E-83
sp|Q86JM5|Y2012_DICDI Putative elongation of fatty acids protein DDB_G0272012 OS=Dictyostelium discoideum GN=DDB_G0272012 PE=3 SV=1 29 230 4.0E-33
sp|Q54CJ4|ELOA_DICDI Elongation of fatty acids protein A OS=Dictyostelium discoideum GN=eloA PE=2 SV=1 41 287 1.0E-30
sp|Q54TC9|SRE1_DICDI Elongation of fatty acids protein sre1 OS=Dictyostelium discoideum GN=sre1 PE=2 SV=1 38 292 3.0E-23
sp|Q555E8|Y4669_DICDI Putative elongation of fatty acids protein DDB_G0274669 OS=Dictyostelium discoideum GN=DDB_G0274669 PE=3 SV=1 29 230 1.0E-19
sp|Q5ZJR8|ELOV6_CHICK Elongation of very long chain fatty acids protein 6 OS=Gallus gallus GN=ELOVL6 PE=2 SV=1 56 298 6.0E-18
sp|P49191|ELO3_CAEEL Putative fatty acid elongation protein 3 OS=Caenorhabditis elegans GN=elo-3 PE=1 SV=2 45 339 9.0E-17
sp|Q3S8M4|ELOV4_MACMU Elongation of very long chain fatty acids protein 4 OS=Macaca mulatta GN=ELOVL4 PE=3 SV=1 49 328 3.0E-16
sp|Q95K73|ELOV4_MACFA Elongation of very long chain fatty acids protein 4 OS=Macaca fascicularis GN=ELOVL4 PE=2 SV=1 49 328 3.0E-16
sp|Q9H5J4|ELOV6_HUMAN Elongation of very long chain fatty acids protein 6 OS=Homo sapiens GN=ELOVL6 PE=1 SV=1 56 296 3.0E-16
sp|Q9GZR5|ELOV4_HUMAN Elongation of very long chain fatty acids protein 4 OS=Homo sapiens GN=ELOVL4 PE=1 SV=1 49 304 4.0E-16
sp|Q32NI8|ELOV5_XENLA Elongation of very long chain fatty acids protein 5 OS=Xenopus laevis GN=elovl5 PE=2 SV=1 58 308 6.0E-16
sp|Q920L5|ELOV6_MOUSE Elongation of very long chain fatty acids protein 6 OS=Mus musculus GN=Elovl6 PE=1 SV=1 56 297 6.0E-16
sp|Q920L7|ELOV5_RAT Elongation of very long chain fatty acids protein 5 OS=Rattus norvegicus GN=Elovl5 PE=1 SV=1 64 340 1.0E-15
sp|Q20303|ELO6_CAEEL Elongation of very long chain fatty acids protein 6 OS=Caenorhabditis elegans GN=elo-6 PE=1 SV=1 65 304 2.0E-15
sp|Q5M8U1|ELOV5_XENTR Elongation of very long chain fatty acids protein 5 OS=Xenopus tropicalis GN=elovl5 PE=2 SV=1 58 308 2.0E-15
sp|Q9NYP7|ELOV5_HUMAN Elongation of very long chain fatty acids protein 5 OS=Homo sapiens GN=ELOVL5 PE=1 SV=1 58 308 2.0E-15
sp|Q9EQC4|ELOV4_MOUSE Elongation of very long chain fatty acids protein 4 OS=Mus musculus GN=Elovl4 PE=1 SV=2 49 328 2.0E-15
sp|Q8BHI7|ELOV5_MOUSE Elongation of very long chain fatty acids protein 5 OS=Mus musculus GN=Elovl5 PE=1 SV=1 63 340 2.0E-15
sp|Q2KJD9|ELOV5_BOVIN Elongation of very long chain fatty acids protein 5 OS=Bos taurus GN=ELOVL5 PE=2 SV=1 63 338 5.0E-15
sp|Q4R516|ELOV5_MACFA Elongation of very long chain fatty acids protein 5 OS=Macaca fascicularis GN=ELOVL5 PE=2 SV=1 58 335 7.0E-15
sp|Q6PC64|ELOV6_DANRE Elongation of very long chain fatty acids protein 6 OS=Danio rerio GN=elovl6 PE=2 SV=1 56 299 1.0E-14
sp|Q9JLJ4|ELOV2_MOUSE Elongation of very long chain fatty acids protein 2 OS=Mus musculus GN=Elovl2 PE=1 SV=1 58 289 3.0E-14
sp|Q9NXB9|ELOV2_HUMAN Elongation of very long chain fatty acids protein 2 OS=Homo sapiens GN=ELOVL2 PE=1 SV=2 63 340 3.0E-14
sp|A1L3X0|ELOV7_HUMAN Elongation of very long chain fatty acids protein 7 OS=Homo sapiens GN=ELOVL7 PE=1 SV=1 72 231 5.0E-14
sp|D4A612|ELOV2_RAT Elongation of very long chain fatty acids protein 2 OS=Rattus norvegicus GN=Elovl2 PE=1 SV=1 63 338 5.0E-14
sp|Q5RFL5|ELOV5_PONAB Elongation of very long chain fatty acids protein 5 OS=Pongo abelii GN=ELOVL5 PE=2 SV=1 58 335 9.0E-14
sp|Q920L6|ELOV6_RAT Elongation of very long chain fatty acids protein 6 OS=Rattus norvegicus GN=Elovl6 PE=1 SV=1 56 215 2.0E-13
sp|A0JNC4|ELOV7_BOVIN Elongation of very long chain fatty acids protein 7 OS=Bos taurus GN=ELOVL7 PE=2 SV=1 53 231 7.0E-13
sp|Q9D2Y9|ELOV7_MOUSE Elongation of very long chain fatty acids protein 7 OS=Mus musculus GN=Elovl7 PE=2 SV=1 53 238 1.0E-12
sp|Q20300|ELO5_CAEEL Elongation of very long chain fatty acids protein 5 OS=Caenorhabditis elegans GN=elo-5 PE=1 SV=1 63 291 1.0E-12
sp|D4ADY9|ELOV7_RAT Elongation of very long chain fatty acids protein 7 OS=Rattus norvegicus GN=Elovl7 PE=3 SV=1 53 238 1.0E-12
sp|Q9JLJ5|ELOV1_MOUSE Elongation of very long chain fatty acids protein 1 OS=Mus musculus GN=Elovl1 PE=1 SV=1 42 231 1.0E-11
sp|Q9BW60|ELOV1_HUMAN Elongation of very long chain fatty acids protein 1 OS=Homo sapiens GN=ELOVL1 PE=1 SV=1 53 231 2.0E-11
sp|Q03574|ELO4_CAEEL Putative fatty acid elongation protein 4 OS=Caenorhabditis elegans GN=elo-4 PE=3 SV=1 63 222 7.0E-10
sp|O35949|ELOV3_MOUSE Elongation of very long chain fatty acids protein 3 OS=Mus musculus GN=Elovl3 PE=1 SV=1 72 298 1.0E-08
sp|Q9HB03|ELOV3_HUMAN Elongation of very long chain fatty acids protein 3 OS=Homo sapiens GN=ELOVL3 PE=1 SV=2 63 298 2.0E-08
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GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0044425 membrane part No
GO:0005575 cellular_component No
GO:0031224 intrinsic component of membrane No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 38 0.5

Transmembrane Domains

Domain # Start End Length
1 50 72 22
2 85 107 22
3 185 207 22
4 226 248 22
5 263 285 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5291
MTAPSTFYEQLPLPTLDRPFGIRLWPLFDKAWTAVVGYPANDFRFVPFETPMSTLKSTSIFIVIYYSVIFGGREM
MRKRGPLKLNTLFLVHNLYLTLISGILLALFIEQLLPTVVRHGIFYSICDREGGWTQPLVVLYYLNYLTKYLELL
DTVFLFLKKKPLTFLHCYHHGATALLCYTQLIGSTAVSWVPITLNLTVHVVMYWYYFQSARGVRVWWKEWVTRLQ
IIQFIIDLGFVYFASYTYFSSTYFSWMPNAGTCAGEEFAAFSGIAILSSYLVLFISFYLATYKKHGKATTSRKSL
RRMSQAPLPDPLHVQEVVDDLTNGSTTGVKANGTATRSRKA*
Coding >Hirsu2|5291
ATGACGGCCCCGTCGACCTTCTACGAGCAGCTGCCGCTGCCGACGCTCGACCGCCCCTTCGGCATCCGCCTCTGG
CCGCTGTTCGACAAGGCCTGGACGGCCGTCGTCGGCTACCCGGCCAATGACTTCCGCTTCGTGCCGTTCGAGACG
CCCATGTCGACTCTCAAGTCGACATCGATATTCATCGTCATCTACTACAGCGTCATCTTTGGCGGCCGCGAGATG
ATGCGCAAGCGCGGGCCCTTGAAGCTCAATACGCTCTTCCTCGTCCACAATCTGTACCTCACCCTCATCAGCGGC
ATCCTTCTGGCTCTCTTCATTGAGCAGCTCCTCCCCACCGTCGTCCGCCACGGCATCTTCTATTCCATCTGCGAC
CGCGAGGGCGGCTGGACGCAGCCTCTCGTCGTCCTGTACTACCTCAACTACTTGACCAAGTATCTCGAGCTTCTC
GATACCGTCTTCCTGTTCCTCAAGAAGAAGCCGTTGACCTTCCTGCACTGCTACCATCATGGGGCCACCGCCCTG
CTCTGCTACACTCAACTCATCGGCTCGACTGCCGTCTCTTGGGTGCCCATCACGCTCAACCTGACGGTACACGTC
GTCATGTACTGGTACTATTTCCAGAGCGCTCGCGGCGTGCGCGTCTGGTGGAAGGAATGGGTCACCCGCCTCCAG
ATCATCCAGTTCATCATCGATCTCGGCTTCGTCTACTTCGCGTCGTACACGTACTTCTCGTCGACCTACTTCTCC
TGGATGCCCAATGCCGGCACGTGCGCCGGCGAGGAGTTTGCCGCCTTCTCCGGCATCGCCATCCTCAGCTCCTAC
CTGGTCCTCTTCATCTCCTTCTACCTGGCGACGTACAAGAAGCACGGCAAGGCGACGACGAGCCGCAAGTCGCTG
CGCCGCATGAGCCAAGCCCCGCTGCCGGATCCGTTGCACGTGCAGGAGGTCGTCGACGACCTCACCAACGGCTCC
ACCACGGGGGTCAAGGCCAATGGGACGGCGACGCGATCGCGCAAGGCCTGA
Transcript >Hirsu2|5291
ATGACGGCCCCGTCGACCTTCTACGAGCAGCTGCCGCTGCCGACGCTCGACCGCCCCTTCGGCATCCGCCTCTGG
CCGCTGTTCGACAAGGCCTGGACGGCCGTCGTCGGCTACCCGGCCAATGACTTCCGCTTCGTGCCGTTCGAGACG
CCCATGTCGACTCTCAAGTCGACATCGATATTCATCGTCATCTACTACAGCGTCATCTTTGGCGGCCGCGAGATG
ATGCGCAAGCGCGGGCCCTTGAAGCTCAATACGCTCTTCCTCGTCCACAATCTGTACCTCACCCTCATCAGCGGC
ATCCTTCTGGCTCTCTTCATTGAGCAGCTCCTCCCCACCGTCGTCCGCCACGGCATCTTCTATTCCATCTGCGAC
CGCGAGGGCGGCTGGACGCAGCCTCTCGTCGTCCTGTACTACCTCAACTACTTGACCAAGTATCTCGAGCTTCTC
GATACCGTCTTCCTGTTCCTCAAGAAGAAGCCGTTGACCTTCCTGCACTGCTACCATCATGGGGCCACCGCCCTG
CTCTGCTACACTCAACTCATCGGCTCGACTGCCGTCTCTTGGGTGCCCATCACGCTCAACCTGACGGTACACGTC
GTCATGTACTGGTACTATTTCCAGAGCGCTCGCGGCGTGCGCGTCTGGTGGAAGGAATGGGTCACCCGCCTCCAG
ATCATCCAGTTCATCATCGATCTCGGCTTCGTCTACTTCGCGTCGTACACGTACTTCTCGTCGACCTACTTCTCC
TGGATGCCCAATGCCGGCACGTGCGCCGGCGAGGAGTTTGCCGCCTTCTCCGGCATCGCCATCCTCAGCTCCTAC
CTGGTCCTCTTCATCTCCTTCTACCTGGCGACGTACAAGAAGCACGGCAAGGCGACGACGAGCCGCAAGTCGCTG
CGCCGCATGAGCCAAGCCCCGCTGCCGGATCCGTTGCACGTGCAGGAGGTCGTCGACGACCTCACCAACGGCTCC
ACCACGGGGGTCAAGGCCAATGGGACGGCGACGCGATCGCGCAAGGCCTGA
Gene >Hirsu2|5291
ATGACGGCCCCGTCGACCTTCTACGAGCAGCTGCCGCTGCCGACGCTCGACCGCCCCTTCGGCATCCGCCTCTGG
CCGCTGTTCGACAAGGCCTGGACGGCCGTCGTCGGCTACCCGGCCAATGACTTCCGCTTCGTGCCGTTCGAGACG
CCCATGTCGACTCTCAAGTCGACATCGATATTCATCGTCATCTACTACAGCGTCATCTTTGGCGGCCGCGAGATG
ATGCGCAAGCGCGGGCCCTTGAAGCTCAATACGCTCTTCCTCGTCCACAATCTGTACCTCACCCTCATCAGCGGC
ATCCTTCTGGCTCTCTTCATTGAGCAGCTCCTCCCCACCGTCGTCCGCCACGGCATCTTCTATTCCATCTGCGAC
CGCGAGGGCGGCTGGACGCAGCCTCTCGTCGTCCTGTACTACGTAACAAGCCCTCTCCCGACTCACCTTCTGTCC
CGTGTGGATGGTGCCGGCTGACAGCCCAGTCCAGCTCAACTACTTGACCAAGTATCTCGAGCTTCTCGATACCGT
CTTCCTGTTCCTCAAGAAGAAGCCGTTGAGTAAGCCCCATGCGGCCCTCGCCCTCGTCGAATCTGCAAAATGTCC
CAGCCCGTCGGTGCTAACCAATCCGCCGCCGCAGCCTTCCTGCACTGCTACCATCATGGGGCCACCGCCCTGCTC
TGCTACACTCAACTCATCGGCTCGACTGCCGTCTCTTGGGTGCCCATCACGCTCAACCTGACGGTACACGTCGTC
ATGTACTGGTACTATTTCCAGAGCGCTCGCGGCGTGCGCGTCTGGTGGAAGGAATGGGTCACCCGCCTCCAGATC
ATCCAGTTCATCATCGATCTCGGTGAGTCGCATCACGCTCGGGACCCGGTGCAGGGAGTGTGAGCTGACGGAAAG
CGTGCGCCAGGCTTCGTCTACTTCGCGTCGTACACGTACTTCTCGTCGACCTACTTCTCCTGGATGCCCAATGCC
GGCACGTGCGCCGGCGAGGAGTTTGCCGCCTTCTCCGGCATCGCCATCCTCAGCTCCTACCTGGTCCTCTTCATC
TCCTTCTACCTGGCGACGTACAAGAAGCACGGCAAGGCGACGACGAGCCGCAAGTCGCTGCGCCGCATGAGCCAA
GCCCCGCTGCCGGATCCGTTGCACGTGCAGGAGGTCGTCGACGACCTCACCAACGGCTCCACCACGGGGGTCAAG
GCCAATGGGACGGCGACGCGATCGCGCAAGGCCTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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