Fungal Genomics

Agaricus bisporus var bisporus H39 Agaricus bisporus var bisporus H97 Agaricus bisporus var burnettii H119p4 Ophiocordyceps australis 1348a (Ghana) Ophiocordyceps australis map64 (Brazil) Ophiocordyceps camponoti-floridani Ophiocordyceps camponoti-rufipedis Ophiocordyceps kimflemingae Ophiocordyceps subramaniannii Penicillium roqueforti DTO002I6 Penicillium roqueforti DTO003C3 Penicillium roqueforti DTO003H1 (CBS 147308) Penicillium roqueforti DTO006G1 Penicillium roqueforti DTO006G7 Penicillium roqueforti DTO012A1 Penicillium roqueforti DTO012A2 (CBS 147309) Penicillium roqueforti DTO012A6 (CBS 147310) Penicillium roqueforti DTO012A7 Penicillium roqueforti DTO012A8 Penicillium roqueforti DTO012A9 Penicillium roqueforti DTO013E5 Penicillium roqueforti DTO013F2 Penicillium roqueforti DTO013F5 (CBS 147311) Penicillium roqueforti DTO027I6 Penicillium roqueforti DTO032C6 Penicillium roqueforti DTO039G3 Penicillium roqueforti DTO046C5 Penicillium roqueforti DTO070G2 (CBS 147317) Penicillium roqueforti DTO081F9 (CBS 147318) Penicillium roqueforti DTO101D6 (CBS 147325) Penicillium roqueforti DTO102I9 (CBS 147326) Penicillium roqueforti DTO126G2 (CBS 147330) Penicillium roqueforti DTO127F7 (CBS 147331) Penicillium roqueforti DTO127F9 (CBS 147332) Penicillium roqueforti DTO130C1 (CBS 147333) Penicillium roqueforti DTO163C3 (CBS 147337) Penicillium roqueforti DTO163F5 (CBS 147338) Penicillium roqueforti DTO163G4 (CBS 147339) Penicillium roqueforti DTO265D5 (CBS 147372) Penicillium roqueforti DTO369A1 (CBS 147354) Penicillium roqueforti DTO375B1 (CBS 147355) Penicillium roqueforti DTO377G2 (LCP 96.3914a) Penicillium roqueforti LCP96 04111 Rhodonia placenta FPRL280

General Properties

Protein ID	Hirsu2|5267
Gene name
Location	Contig_263:4875..5310
Strand	+
Gene length (bp)	435
Transcript length (bp)	285
Coding sequence length (bp)	285
Protein length (aa)	95

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF08293	MRP-S33	Mitochondrial ribosomal subunit S27	1.2E-29	1	82

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp|P53305|RT27_YEAST	Mitochondrial 37S ribosomal protein S27 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RSM27 PE=1 SV=1	4	84	2.0E-11

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 20	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2|5267 MKAQCQVFATIYNPEGIRMGNKVLRQRLRGPAMAEYYPRKTATISDVNREFGPVLTTWDEEEEDRLEHIEELKSR GKSAPKKKKGPPTPAQRRR*
Coding	>Hirsu2|5267 ATGAAGGCGCAATGCCAAGTCTTCGCGACCATATACAATCCCGAGGGGATTCGCATGGGCAACAAGGTCCTGCGG CAACGCTTAAGAGGGCCTGCGATGGCTGAATACTACCCGAGAAAGACAGCGACCATCTCGGATGTCAACCGCGAA TTCGGCCCGGTCCTGACAACCTGGGACGAGGAGGAAGAGGATCGATTGGAGCACATCGAGGAGCTCAAGTCGCGC GGCAAGAGCGCACCGAAGAAGAAGAAGGGTCCTCCCACTCCTGCGCAACGGCGTCGTTGA
Transcript	>Hirsu2|5267 ATGAAGGCGCAATGCCAAGTCTTCGCGACCATATACAATCCCGAGGGGATTCGCATGGGCAACAAGGTCCTGCGG CAACGCTTAAGAGGGCCTGCGATGGCTGAATACTACCCGAGAAAGACAGCGACCATCTCGGATGTCAACCGCGAA TTCGGCCCGGTCCTGACAACCTGGGACGAGGAGGAAGAGGATCGATTGGAGCACATCGAGGAGCTCAAGTCGCGC GGCAAGAGCGCACCGAAGAAGAAGAAGGGTCCTCCCACTCCTGCGCAACGGCGTCGTTGA
Gene	>Hirsu2|5267 ATGAAGGTATGCAGTCTCTGACGACTCGAGCCTCGCAACTGACGCCCCTCAGGCGCAATGCCAAGTCTTCGCGAC CATATACAATCCCGAGGGGATTCGCATGGGCAACAAGGTCCTGCGGCAACGCTTAAGAGGGCCTGCGATGGCTGA ATACTACCCGAGAAAGACAGCGACCATCTCGGATGTCAACCGCGAATTCGGCCCGGTCCTGACAACCTGGGACGA GGAGGAAGAGGATCGATTGGAGCACATCGAGGAGTAAGATTCGGAACCCGCCTCGCACGATTTTGCCTGCTGATA GGTGGCGCACAGGCTCAAGTCGCGCGGCAAGAGCGCACCGAAGAAGAAGAAGGGTCCTCCCAGTGCGTACATGAT CCTTACGGCTCAACTTCGTGTGGCTGACGCCCTACAGCTCCTGCGCAACGGCGTCGTTGA