© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|5265 |
| Gene name | |
| Location | Contig_263:1360..2362 |
| Strand | - |
| Gene length (bp) | 1002 |
| Transcript length (bp) | 864 |
| Coding sequence length (bp) | 864 |
| Protein length (aa) | 288 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00887 | ACBP | Acyl CoA binding protein | 5.0E-24 | 6 | 94 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|C4R8D7|ATG37_PICPG | Autophagy-related protein 37 OS=Komagataella pastoris (strain GS115 / ATCC 20864) GN=PAS_chr4_0602 PE=1 SV=1 | 1 | 136 | 2.0E-32 |
| sp|Q20507|ACBP3_CAEEL | Acyl-CoA-binding protein homolog 3 OS=Caenorhabditis elegans GN=acbp-3 PE=3 SV=2 | 4 | 107 | 7.0E-10 |
| sp|P0C8L7|ACBP_HYPDU | Putative acyl-CoA-binding protein OS=Hypsibius dujardini PE=3 SV=1 | 4 | 91 | 3.0E-07 |
| sp|P31824|ACBP_MANSE | Acyl-CoA-binding protein homolog OS=Manduca sexta PE=3 SV=1 | 4 | 98 | 4.0E-07 |
| sp|P61867|ACBP2_SACPS | Acyl-CoA-binding protein 2 OS=Saccharomyces pastorianus GN=ACB2 PE=1 SV=2 | 5 | 103 | 5.0E-07 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|C4R8D7|ATG37_PICPG | Autophagy-related protein 37 OS=Komagataella pastoris (strain GS115 / ATCC 20864) GN=PAS_chr4_0602 PE=1 SV=1 | 1 | 136 | 2.0E-32 |
| sp|Q20507|ACBP3_CAEEL | Acyl-CoA-binding protein homolog 3 OS=Caenorhabditis elegans GN=acbp-3 PE=3 SV=2 | 4 | 107 | 7.0E-10 |
| sp|P0C8L7|ACBP_HYPDU | Putative acyl-CoA-binding protein OS=Hypsibius dujardini PE=3 SV=1 | 4 | 91 | 3.0E-07 |
| sp|P31824|ACBP_MANSE | Acyl-CoA-binding protein homolog OS=Manduca sexta PE=3 SV=1 | 4 | 98 | 4.0E-07 |
| sp|P61867|ACBP2_SACPS | Acyl-CoA-binding protein 2 OS=Saccharomyces pastorianus GN=ACB2 PE=1 SV=2 | 5 | 103 | 5.0E-07 |
| sp|P61868|ACBP2_SACMO | Acyl-CoA-binding protein 2 OS=Saccharomyces pastorianus (strain ATCC 76670 / Carlsberg bottom yeast no.2 / CBS 1503 / CLIB 180 / NBRC 10610 / NRRL Y-1525) GN=ACB2 PE=3 SV=2 | 5 | 103 | 5.0E-07 |
| sp|P42281|ACBP_DROME | Acyl-CoA-binding protein homolog OS=Drosophila melanogaster GN=Dbi PE=2 SV=1 | 5 | 102 | 8.0E-07 |
| sp|P31787|ACBP_YEAST | Acyl-CoA-binding protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ACB1 PE=1 SV=3 | 5 | 103 | 2.0E-06 |
| sp|P45882|ACBP_ANAPL | Acyl-CoA-binding protein OS=Anas platyrhynchos GN=DBI PE=3 SV=1 | 9 | 102 | 4.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0000062 | fatty-acyl-CoA binding | Yes |
| GO:0097367 | carbohydrate derivative binding | No |
| GO:0003674 | molecular_function | No |
| GO:0120227 | acyl-CoA binding | No |
| GO:0032555 | purine ribonucleotide binding | No |
| GO:1901681 | sulfur compound binding | No |
| GO:0005488 | binding | No |
| GO:1901567 | fatty acid derivative binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0032559 | adenyl ribonucleotide binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0017076 | purine nucleotide binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:0033218 | amide binding | No |
| GO:0030554 | adenyl nucleotide binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0032553 | ribonucleotide binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 25 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 234 | 256 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|5265 MADSVDRVFVHALNTVKKIPKTGASRPPPSDRLRLYGLYKQAMEGDVDGVMEQPAPAPGLTAEDLQRERDKWHAW NSQRGLSRTEAKRRYVEALIKTMHRYATTSDATELVAELEFVWNQIKHNSPSSSDSSPKAGGGGGGRRQQFQAPL SGTDGPMKVLTPMSEQDEAELRSQRQMELEDDAAGAADSSRWQRKMERAVTNLSAQVAALREQIATGREWKSKKQ RSFPAWLRWAAWLVMKHLVADLVVLALVLLWMRKRKDRRLEDLVRAAFRLGREYVRKVLPSR* |
| Coding | >Hirsu2|5265 ATGGCCGACTCCGTGGATCGGGTCTTCGTCCACGCGCTCAACACCGTCAAGAAGATACCCAAGACGGGCGCGTCG CGGCCGCCGCCGTCGGACCGCCTGCGTCTCTACGGCCTCTACAAGCAGGCCATGGAGGGGGACGTGGACGGGGTC ATGGAGCAGCCCGCGCCCGCGCCCGGGCTGACGGCGGAAGACCTGCAGAGGGAACGGGACAAGTGGCACGCCTGG AACTCGCAGAGGGGCCTGAGCCGGACCGAGGCCAAACGGCGATACGTCGAGGCCCTCATCAAGACGATGCATCGA TACGCCACCACGTCGGATGCTACTGAGCTGGTAGCCGAGCTCGAGTTCGTCTGGAACCAAATCAAGCACAACTCG CCCAGCTCGTCCGACTCGTCGCCCAAGGCGGGCGGCGGCGGCGGCGGGCGGCGGCAGCAGTTCCAGGCGCCGCTG AGCGGCACCGACGGCCCGATGAAGGTGCTGACGCCCATGAGCGAGCAGGACGAGGCCGAGCTGCGGTCGCAGCGG CAGATGGAGCTCGAGGACGACGCGGCGGGGGCGGCGGACAGCAGCCGCTGGCAGCGCAAGATGGAGCGCGCCGTC ACCAACCTGTCGGCCCAGGTGGCGGCGCTGCGCGAGCAGATCGCGACGGGGCGCGAGTGGAAGTCGAAGAAGCAG CGCAGCTTCCCGGCCTGGCTCCGCTGGGCGGCGTGGCTGGTGATGAAGCACCTGGTCGCCGACCTCGTCGTCCTC GCCCTCGTCCTGCTGTGGATGCGGAAGCGCAAGGACCGGCGGCTCGAGGACCTGGTGCGGGCCGCCTTCCGGCTG GGCCGGGAATACGTCCGCAAGGTCCTCCCGTCCAGGTGA |
| Transcript | >Hirsu2|5265 ATGGCCGACTCCGTGGATCGGGTCTTCGTCCACGCGCTCAACACCGTCAAGAAGATACCCAAGACGGGCGCGTCG CGGCCGCCGCCGTCGGACCGCCTGCGTCTCTACGGCCTCTACAAGCAGGCCATGGAGGGGGACGTGGACGGGGTC ATGGAGCAGCCCGCGCCCGCGCCCGGGCTGACGGCGGAAGACCTGCAGAGGGAACGGGACAAGTGGCACGCCTGG AACTCGCAGAGGGGCCTGAGCCGGACCGAGGCCAAACGGCGATACGTCGAGGCCCTCATCAAGACGATGCATCGA TACGCCACCACGTCGGATGCTACTGAGCTGGTAGCCGAGCTCGAGTTCGTCTGGAACCAAATCAAGCACAACTCG CCCAGCTCGTCCGACTCGTCGCCCAAGGCGGGCGGCGGCGGCGGCGGGCGGCGGCAGCAGTTCCAGGCGCCGCTG AGCGGCACCGACGGCCCGATGAAGGTGCTGACGCCCATGAGCGAGCAGGACGAGGCCGAGCTGCGGTCGCAGCGG CAGATGGAGCTCGAGGACGACGCGGCGGGGGCGGCGGACAGCAGCCGCTGGCAGCGCAAGATGGAGCGCGCCGTC ACCAACCTGTCGGCCCAGGTGGCGGCGCTGCGCGAGCAGATCGCGACGGGGCGCGAGTGGAAGTCGAAGAAGCAG CGCAGCTTCCCGGCCTGGCTCCGCTGGGCGGCGTGGCTGGTGATGAAGCACCTGGTCGCCGACCTCGTCGTCCTC GCCCTCGTCCTGCTGTGGATGCGGAAGCGCAAGGACCGGCGGCTCGAGGACCTGGTGCGGGCCGCCTTCCGGCTG GGCCGGGAATACGTCCGCAAGGTCCTCCCGTCCAGGTGA |
| Gene | >Hirsu2|5265 ATGGCCGACTCCGTGGGTAGGTGGCCCCGTCATCGAGCGGTCGCAAGGGCGCCATCGGGATGCTGACCCGCCGGT TGCCTCGACACAGATCGGGTCTTCGTCCACGCGCTCAACACCGTCAAGAAGATACCCAAGACGGGCGCGTCGCGG CCGCCGCCGTCGGACCGCCTGCGTCTCTACGGCCTCTACAAGCAGGCCATGGAGGGGGACGTGGACGGGGTCATG GAGCAGCCCGCGCCCGCGCCCGGGCTGACGGCGGAAGACCTGCAGAGGGAACGGGACAAGTGGCACGCCTGGAAC TCGCAGAGGGGCCTGAGCCGGACCGAGGCCAAACGGCGATACGTCGAGGCCCTCATCAAGACGATGCATCGATAC GCCACCACGTCGTAAGCCTCGGCCAGCACGGAAGGGGTGGGCAGACGGTTGCGGCTGACTGGAACTCTTTTTGTC AGGGATGCTACTGAGCTGGTAGCCGAGCTCGAGTTCGTCTGGAACCAAATCAAGCACAACTCGCCCAGCTCGTCC GACTCGTCGCCCAAGGCGGGCGGCGGCGGCGGCGGGCGGCGGCAGCAGTTCCAGGCGCCGCTGAGCGGCACCGAC GGCCCGATGAAGGTGCTGACGCCCATGAGCGAGCAGGACGAGGCCGAGCTGCGGTCGCAGCGGCAGATGGAGCTC GAGGACGACGCGGCGGGGGCGGCGGACAGCAGCCGCTGGCAGCGCAAGATGGAGCGCGCCGTCACCAACCTGTCG GCCCAGGTGGCGGCGCTGCGCGAGCAGATCGCGACGGGGCGCGAGTGGAAGTCGAAGAAGCAGCGCAGCTTCCCG GCCTGGCTCCGCTGGGCGGCGTGGCTGGTGATGAAGCACCTGGTCGCCGACCTCGTCGTCCTCGCCCTCGTCCTG CTGTGGATGCGGAAGCGCAAGGACCGGCGGCTCGAGGACCTGGTGCGGGCCGCCTTCCGGCTGGGCCGGGAATAC GTCCGCAAGGTCCTCCCGTCCAGGTGA |