© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|5243 |
| Gene name | |
| Location | Contig_2615:1305..1890 |
| Strand | - |
| Gene length (bp) | 585 |
| Transcript length (bp) | 585 |
| Coding sequence length (bp) | 585 |
| Protein length (aa) | 195 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00465 | Fe-ADH | Iron-containing alcohol dehydrogenase | 4.8E-09 | 4 | 94 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q93T12|TFDF_DELAC | Maleylacetate reductase OS=Delftia acidovorans GN=tfdF PE=1 SV=2 | 5 | 178 | 4.0E-17 |
| sp|P27101|TCBF_PSESQ | Maleylacetate reductase OS=Pseudomonas sp. (strain P51) GN=tcbF PE=3 SV=1 | 5 | 178 | 4.0E-17 |
| sp|Q45072|TFTE_BURCE | Maleylacetate reductase OS=Burkholderia cepacia GN=tftE PE=3 SV=1 | 5 | 172 | 4.0E-16 |
| sp|P27137|TFDF1_CUPPJ | Maleylacetate reductase 1 OS=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) GN=tfdFI PE=3 SV=1 | 4 | 172 | 4.0E-15 |
| sp|O84992|MACA1_RHOOP | Maleylacetate reductase 1 OS=Rhodococcus opacus GN=macA PE=3 SV=1 | 5 | 187 | 7.0E-15 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q93T12|TFDF_DELAC | Maleylacetate reductase OS=Delftia acidovorans GN=tfdF PE=1 SV=2 | 5 | 178 | 4.0E-17 |
| sp|P27101|TCBF_PSESQ | Maleylacetate reductase OS=Pseudomonas sp. (strain P51) GN=tcbF PE=3 SV=1 | 5 | 178 | 4.0E-17 |
| sp|Q45072|TFTE_BURCE | Maleylacetate reductase OS=Burkholderia cepacia GN=tftE PE=3 SV=1 | 5 | 172 | 4.0E-16 |
| sp|P27137|TFDF1_CUPPJ | Maleylacetate reductase 1 OS=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) GN=tfdFI PE=3 SV=1 | 4 | 172 | 4.0E-15 |
| sp|O84992|MACA1_RHOOP | Maleylacetate reductase 1 OS=Rhodococcus opacus GN=macA PE=3 SV=1 | 5 | 187 | 7.0E-15 |
| sp|P94135|TFDF2_CUPPJ | Maleylacetate reductase 2 OS=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) GN=tfdFII PE=1 SV=1 | 5 | 180 | 3.0E-14 |
| sp|O30847|CLCE_PSEKB | Maleylacetate reductase OS=Pseudomonas knackmussii (strain DSM 6978 / LMG 23759 / B13) GN=clcE PE=3 SV=1 | 5 | 180 | 3.0E-14 |
| sp|O87612|CLCE_PSEAI | Maleylacetate reductase OS=Pseudomonas aeruginosa GN=clcE PE=3 SV=1 | 5 | 180 | 4.0E-14 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0046872 | metal ion binding | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0005488 | binding | No |
| GO:0043167 | ion binding | No |
| GO:0043169 | cation binding | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 17 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|5243 LLAPLIVSSPSRIALARRIQALIPNLDSRILDSAVVNVPARVVDDALDRISGRDVVISVGGASAVGLAKAIGCRK GIPHICIPTTYSGSEMMPLLLDASPARHSSSSSSSNSGHSRRHPHASSRRKPTGNTSTVRDPKVLPSVIIYDEEL TMSAPRRFSAPSDTAAMARSSEFRACPSKSDDTAQWSYIHLPGV* |
| Coding | >Hirsu2|5243 CTGTTGGCGCCTCTCATCGTCTCGAGCCCCTCGCGCATCGCCCTCGCTCGCCGCATCCAAGCCCTCATCCCCAAC CTCGACTCGCGAATCCTCGACTCGGCCGTCGTCAACGTGCCCGCCCGTGTCGTCGACGACGCCCTGGACCGCATC TCCGGCCGCGACGTCGTCATCAGCGTGGGCGGAGCCTCCGCCGTCGGTCTCGCAAAGGCCATCGGCTGCCGCAAG GGCATTCCTCACATCTGCATCCCCACCACCTACTCCGGCTCCGAGATGATGCCCCTTCTCCTCGACGCCAGCCCC GCCCGCCACAGCAGCAGCAGCAGCAGCAGCAACAGCGGCCACAGCCGCCGCCACCCCCATGCTTCTTCCAGGAGG AAGCCGACGGGCAACACGAGCACCGTCCGCGACCCCAAGGTCCTGCCCAGCGTCATCATCTACGACGAGGAGCTC ACCATGAGCGCCCCGAGGCGCTTCTCCGCCCCGTCCGACACTGCCGCCATGGCCCGCTCCTCCGAGTTCCGTGCC TGCCCGTCCAAGAGCGACGACACCGCGCAGTGGAGTTACATTCATCTGCCTGGCGTCTAA |
| Transcript | >Hirsu2|5243 CTGTTGGCGCCTCTCATCGTCTCGAGCCCCTCGCGCATCGCCCTCGCTCGCCGCATCCAAGCCCTCATCCCCAAC CTCGACTCGCGAATCCTCGACTCGGCCGTCGTCAACGTGCCCGCCCGTGTCGTCGACGACGCCCTGGACCGCATC TCCGGCCGCGACGTCGTCATCAGCGTGGGCGGAGCCTCCGCCGTCGGTCTCGCAAAGGCCATCGGCTGCCGCAAG GGCATTCCTCACATCTGCATCCCCACCACCTACTCCGGCTCCGAGATGATGCCCCTTCTCCTCGACGCCAGCCCC GCCCGCCACAGCAGCAGCAGCAGCAGCAGCAACAGCGGCCACAGCCGCCGCCACCCCCATGCTTCTTCCAGGAGG AAGCCGACGGGCAACACGAGCACCGTCCGCGACCCCAAGGTCCTGCCCAGCGTCATCATCTACGACGAGGAGCTC ACCATGAGCGCCCCGAGGCGCTTCTCCGCCCCGTCCGACACTGCCGCCATGGCCCGCTCCTCCGAGTTCCGTGCC TGCCCGTCCAAGAGCGACGACACCGCGCAGTGGAGTTACATTCATCTGCCTGGCGTCTAA |
| Gene | >Hirsu2|5243 CTGTTGGCGCCTCTCATCGTCTCGAGCCCCTCGCGCATCGCCCTCGCTCGCCGCATCCAAGCCCTCATCCCCAAC CTCGACTCGCGAATCCTCGACTCGGCCGTCGTCAACGTGCCCGCCCGTGTCGTCGACGACGCCCTGGACCGCATC TCCGGCCGCGACGTCGTCATCAGCGTGGGCGGAGCCTCCGCCGTCGGTCTCGCAAAGGCCATCGGCTGCCGCAAG GGCATTCCTCACATCTGCATCCCCACCACCTACTCCGGCTCCGAGATGATGCCCCTTCTCCTCGACGCCAGCCCC GCCCGCCACAGCAGCAGCAGCAGCAGCAGCAACAGCGGCCACAGCCGCCGCCACCCCCATGCTTCTTCCAGGAGG AAGCCGACGGGCAACACGAGCACCGTCCGCGACCCCAAGGTCCTGCCCAGCGTCATCATCTACGACGAGGAGCTC ACCATGAGCGCCCCGAGGCGCTTCTCCGCCCCGTCCGACACTGCCGCCATGGCCCGCTCCTCCGAGTTCCGTGCC TGCCCGTCCAAGAGCGACGACACCGCGCAGTGGAGTTACATTCATCTGCCTGGCGTCTAA |