Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5230
Gene name
LocationContig_261:10724..11986
Strand+
Gene length (bp)1262
Transcript length (bp)1113
Coding sequence length (bp)1113
Protein length (aa) 371

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04488 Gly_transf_sug Glycosyltransferase sugar-binding region containing DXD motif 3.3E-14 90 176

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O14084|IMT1_SCHPO Inositol phosphoceramide mannosyltransferase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=imt1 PE=3 SV=2 38 262 5.0E-20
sp|Q10323|IMT3_SCHPO Inositol phosphoceramide mannosyltransferase 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17G8.11c PE=1 SV=1 73 171 7.0E-20
sp|Q9UT67|IMT2_SCHPO Inositol phosphoceramide mannosyltransferase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC4F11.04c PE=3 SV=1 71 232 7.0E-20
sp|P38287|CSH1_YEAST Mannosyl phosphorylinositol ceramide synthase CSH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CSH1 PE=1 SV=1 76 232 4.0E-15
sp|P33300|SUR1_YEAST Mannosyl phosphorylinositol ceramide synthase SUR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SUR1 PE=1 SV=1 76 263 3.0E-14
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|O14084|IMT1_SCHPO Inositol phosphoceramide mannosyltransferase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=imt1 PE=3 SV=2 38 262 5.0E-20
sp|Q10323|IMT3_SCHPO Inositol phosphoceramide mannosyltransferase 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17G8.11c PE=1 SV=1 73 171 7.0E-20
sp|Q9UT67|IMT2_SCHPO Inositol phosphoceramide mannosyltransferase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC4F11.04c PE=3 SV=1 71 232 7.0E-20
sp|P38287|CSH1_YEAST Mannosyl phosphorylinositol ceramide synthase CSH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CSH1 PE=1 SV=1 76 232 4.0E-15
sp|P33300|SUR1_YEAST Mannosyl phosphorylinositol ceramide synthase SUR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SUR1 PE=1 SV=1 76 263 3.0E-14
sp|P31755|OCH1_YEAST Initiation-specific alpha-1,6-mannosyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OCH1 PE=1 SV=1 69 169 1.0E-06
sp|Q5A4E3|OCH1_CANAL Initiation-specific alpha-1,6-mannosyltransferase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=OCH1 PE=3 SV=1 69 183 2.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.5

Transmembrane Domains

Domain # Start End Length
1 5 27 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5230
MRRLSLCTYMGLVVVFFVVLCSRYPRVGKIESLPRPKWGSLEAWRAGNASGPANLARAISAADLLARRPAAGSAR
VPKIFHQSWKDTELPAKFQRWSESCRQKHKDWEWVIWTDQDNLTLVRTYFPWLEALYLAMPGEIYRADLVRAMYM
YMYGGVYADLDTECLRPTEELQKRYNVLFDGPNARPSMDTAMFGRMGDDPSFEHSIPNAWMASTPGHPFFLVYLQ
TFVERAKPMADKKRTSAWAAAEHVTGPVVLRQAIAEYEAAKVRAGNSLSGEVVSMAHDLPFATTQMKDHQVVLLP
SQYIYPFNWNADNKKVRVVCWVQDGRYNPDECKKALDVGRKKSISITYWSHTHKKSGLDEDKMKRIKDSG*
Coding >Hirsu2|5230
ATGCGGCGCCTTTCGCTATGCACTTACATGGGGCTCGTCGTCGTCTTCTTCGTCGTCCTGTGCAGCCGCTATCCG
CGTGTCGGCAAAATCGAAAGCCTGCCGCGTCCCAAGTGGGGGAGCCTCGAGGCGTGGAGGGCCGGCAACGCGTCC
GGGCCGGCGAATCTGGCGCGCGCCATCTCGGCCGCCGACCTCCTCGCTCGCCGGCCGGCCGCCGGTTCGGCGAGG
GTCCCCAAGATCTTCCACCAGAGCTGGAAGGACACGGAGCTGCCGGCCAAGTTCCAGCGATGGAGCGAGAGCTGC
CGGCAGAAGCACAAGGACTGGGAATGGGTCATCTGGACCGACCAAGACAACCTCACCCTCGTCCGAACCTACTTT
CCCTGGCTGGAAGCGCTCTACCTCGCCATGCCCGGCGAGATTTACCGCGCAGACCTCGTGAGGGCCATGTACATG
TACATGTACGGAGGCGTGTATGCCGACCTCGACACCGAGTGCCTGCGACCGACGGAAGAGCTCCAGAAGCGCTAC
AATGTCCTGTTTGACGGGCCCAATGCGAGACCATCGATGGACACGGCCATGTTCGGTCGGATGGGCGACGACCCA
AGCTTCGAGCACTCGATCCCGAACGCCTGGATGGCCTCGACGCCGGGCCATCCCTTCTTCCTCGTCTACCTGCAG
ACGTTCGTGGAGCGGGCCAAGCCCATGGCCGACAAGAAGCGCACGAGTGCGTGGGCGGCCGCCGAGCATGTGACG
GGCCCGGTCGTCCTGCGCCAGGCCATTGCCGAGTACGAGGCGGCCAAGGTGCGGGCGGGAAACAGCCTGAGCGGC
GAGGTCGTCAGCATGGCCCACGACCTCCCCTTTGCCACGACGCAGATGAAGGACCACCAGGTCGTGCTGCTGCCG
AGCCAGTACATATACCCCTTCAACTGGAACGCCGACAACAAGAAGGTGCGCGTCGTCTGCTGGGTCCAGGACGGG
CGGTACAACCCCGACGAGTGCAAGAAGGCGCTCGACGTCGGCCGCAAGAAGAGCATCTCCATCACGTACTGGAGC
CACACGCACAAGAAGTCCGGACTGGACGAGGACAAGATGAAGCGTATCAAGGACAGCGGATGA
Transcript >Hirsu2|5230
ATGCGGCGCCTTTCGCTATGCACTTACATGGGGCTCGTCGTCGTCTTCTTCGTCGTCCTGTGCAGCCGCTATCCG
CGTGTCGGCAAAATCGAAAGCCTGCCGCGTCCCAAGTGGGGGAGCCTCGAGGCGTGGAGGGCCGGCAACGCGTCC
GGGCCGGCGAATCTGGCGCGCGCCATCTCGGCCGCCGACCTCCTCGCTCGCCGGCCGGCCGCCGGTTCGGCGAGG
GTCCCCAAGATCTTCCACCAGAGCTGGAAGGACACGGAGCTGCCGGCCAAGTTCCAGCGATGGAGCGAGAGCTGC
CGGCAGAAGCACAAGGACTGGGAATGGGTCATCTGGACCGACCAAGACAACCTCACCCTCGTCCGAACCTACTTT
CCCTGGCTGGAAGCGCTCTACCTCGCCATGCCCGGCGAGATTTACCGCGCAGACCTCGTGAGGGCCATGTACATG
TACATGTACGGAGGCGTGTATGCCGACCTCGACACCGAGTGCCTGCGACCGACGGAAGAGCTCCAGAAGCGCTAC
AATGTCCTGTTTGACGGGCCCAATGCGAGACCATCGATGGACACGGCCATGTTCGGTCGGATGGGCGACGACCCA
AGCTTCGAGCACTCGATCCCGAACGCCTGGATGGCCTCGACGCCGGGCCATCCCTTCTTCCTCGTCTACCTGCAG
ACGTTCGTGGAGCGGGCCAAGCCCATGGCCGACAAGAAGCGCACGAGTGCGTGGGCGGCCGCCGAGCATGTGACG
GGCCCGGTCGTCCTGCGCCAGGCCATTGCCGAGTACGAGGCGGCCAAGGTGCGGGCGGGAAACAGCCTGAGCGGC
GAGGTCGTCAGCATGGCCCACGACCTCCCCTTTGCCACGACGCAGATGAAGGACCACCAGGTCGTGCTGCTGCCG
AGCCAGTACATATACCCCTTCAACTGGAACGCCGACAACAAGAAGGTGCGCGTCGTCTGCTGGGTCCAGGACGGG
CGGTACAACCCCGACGAGTGCAAGAAGGCGCTCGACGTCGGCCGCAAGAAGAGCATCTCCATCACGTACTGGAGC
CACACGCACAAGAAGTCCGGACTGGACGAGGACAAGATGAAGCGTATCAAGGACAGCGGATGA
Gene >Hirsu2|5230
ATGCGGCGCCTTTCGCTATGCACTTACATGGGGCTCGTCGTCGTCTTCTTCGTCGTCCTGTGCAGCCGCTATCCG
CGTGTCGGCAAAATCGAAAGCCTGCCGCGTCCCAAGTGGGGGAGCCTCGAGGCGTGGAGGGCCGGCAACGCGTCC
GGGCCGGCGAATCTGGCGCGCGCCATCTCGGCCGCCGACCTCCTCGCTCGCCGGCCGGCCGCCGGTTCGGCGAGG
GTCCCCAAGATCTTCCACCAGAGCTGGAAGGACACGGAGCTGCCGGCCAAGTTCCAGCGATGGAGCGAGAGCTGC
CGGCAGAAGCACAAGGACTGGGAATGGGTCATCTGGACCGACCAAGACAACCTCACCCTCGTCCGAACCTACTTT
CCCTGGCTGGAAGCGCTCTACCTCGCCATGCCCGGCGAGATTTACCGCGCAGACCTCGTGAGGGCCATGTACATG
TACATGTACGGAGGGTATGCCTTTTCCCTTCCCTTCCCTACCCTTTTCTCCTCTGTCTTCCCTTCCCTTCCCTCC
CAATCCCTTCCTCTGCGAACGAGACTTCGTCCGCTTCGTCTCGGAGGCAGAGGGCGAGGGCGACGTTGCTGAGCG
CACGAGAGTACAGCGTGTATGCCGACCTCGACACCGAGTGCCTGCGACCGACGGAAGAGCTCCAGAAGCGCTACA
ATGTCCTGTTTGACGGGCCCAATGCGAGACCATCGATGGACACGGCCATGTTCGGTCGGATGGGCGACGACCCAA
GCTTCGAGCACTCGATCCCGAACGCCTGGATGGCCTCGACGCCGGGCCATCCCTTCTTCCTCGTCTACCTGCAGA
CGTTCGTGGAGCGGGCCAAGCCCATGGCCGACAAGAAGCGCACGAGTGCGTGGGCGGCCGCCGAGCATGTGACGG
GCCCGGTCGTCCTGCGCCAGGCCATTGCCGAGTACGAGGCGGCCAAGGTGCGGGCGGGAAACAGCCTGAGCGGCG
AGGTCGTCAGCATGGCCCACGACCTCCCCTTTGCCACGACGCAGATGAAGGACCACCAGGTCGTGCTGCTGCCGA
GCCAGTACATATACCCCTTCAACTGGAACGCCGACAACAAGAAGGTGCGCGTCGTCTGCTGGGTCCAGGACGGGC
GGTACAACCCCGACGAGTGCAAGAAGGCGCTCGACGTCGGCCGCAAGAAGAGCATCTCCATCACGTACTGGAGCC
ACACGCACAAGAAGTCCGGACTGGACGAGGACAAGATGAAGCGTATCAAGGACAGCGGATGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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