Protein ID | Hirsu2|5219 |
Gene name | |
Location | Contig_2600:57..797 |
Strand | + |
Gene length (bp) | 740 |
Transcript length (bp) | 621 |
Coding sequence length (bp) | 621 |
Protein length (aa) | 207 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07690 | MFS_1 | Major Facilitator Superfamily | 9.8E-10 | 6 | 131 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q10097|YAOI_SCHPO | Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 | 6 | 204 | 2.0E-34 |
sp|Q9US44|YIZG_SCHPO | Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 | 6 | 205 | 3.0E-34 |
sp|P53322|TNA1_YEAST | High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 | 6 | 205 | 2.0E-31 |
sp|Q9P6J0|YHDC_SCHPO | Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 | 6 | 193 | 7.0E-24 |
sp|Q9US37|YFZ4_SCHPO | Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 | 5 | 204 | 3.0E-14 |
GO Term | Description | Terminal node |
---|---|---|
GO:0055085 | transmembrane transport | Yes |
GO:0022857 | transmembrane transporter activity | Yes |
GO:0009987 | cellular process | No |
GO:0051179 | localization | No |
GO:0005215 | transporter activity | No |
GO:0008150 | biological_process | No |
GO:0051234 | establishment of localization | No |
GO:0003674 | molecular_function | No |
GO:0006810 | transport | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Golgi apparatus | 0.1632 | 0.0736 | 0.1228 | 0.3088 | 0.1608 | 0.0604 | 0.5259 | 0.0769 | 0.7236 | 0.0038 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 26 | 48 | 22 |
2 | 55 | 74 | 19 |
3 | 79 | 101 | 22 |
4 | 114 | 136 | 22 |
5 | 146 | 168 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 3024 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|5219 LPKKKGFSTFLPTIINDLGRWTLPQVQLLTVPCYFVGAAAYMAAAAASDRTQRRGPFCVAFGLVSILGYALLLAD AAPALHYFACFLVAAGLYVVVGLPLAWLPDNSPRYGKRATATGLQLTVGNVAGILSGFIYPKEDAPRYVRGHAIT LAMVAMGTAIYGLMWLWFRRENRRREREPLAEEHRRMKEDELEELGDDSPRYRYMT* |
Coding | >Hirsu2|5219 CTGCCAAAAAAAAAAGGCTTCTCGACCTTCCTGCCGACCATCATCAACGACCTCGGCCGCTGGACGCTGCCGCAG GTCCAGCTGCTGACGGTGCCGTGCTACTTCGTCGGCGCCGCCGCCTACATGGCCGCCGCCGCCGCCTCGGACCGC ACCCAGCGCCGCGGGCCCTTCTGCGTCGCCTTCGGCCTCGTCAGCATCCTCGGCTACGCCCTGCTGCTGGCCGAC GCCGCGCCCGCCCTGCACTACTTCGCCTGCTTCCTCGTCGCCGCCGGCCTGTACGTCGTCGTCGGCCTGCCGCTC GCCTGGCTGCCCGACAACTCGCCGCGCTACGGCAAGCGCGCGACCGCCACGGGGCTGCAGCTGACCGTCGGCAAC GTCGCCGGCATCCTCTCCGGCTTCATCTACCCCAAGGAAGATGCGCCGAGGTACGTGCGCGGCCACGCCATCACG CTGGCCATGGTGGCCATGGGGACCGCCATCTATGGCCTCATGTGGCTCTGGTTCCGGCGCGAGAACCGCCGCCGC GAGCGCGAGCCGCTGGCCGAGGAGCACCGTCGGATGAAGGAGGACGAGCTGGAGGAGCTGGGCGACGACAGCCCG CGATACCGATACATGACTTGA |
Transcript | >Hirsu2|5219 CTGCCAAAAAAAAAAGGCTTCTCGACCTTCCTGCCGACCATCATCAACGACCTCGGCCGCTGGACGCTGCCGCAG GTCCAGCTGCTGACGGTGCCGTGCTACTTCGTCGGCGCCGCCGCCTACATGGCCGCCGCCGCCGCCTCGGACCGC ACCCAGCGCCGCGGGCCCTTCTGCGTCGCCTTCGGCCTCGTCAGCATCCTCGGCTACGCCCTGCTGCTGGCCGAC GCCGCGCCCGCCCTGCACTACTTCGCCTGCTTCCTCGTCGCCGCCGGCCTGTACGTCGTCGTCGGCCTGCCGCTC GCCTGGCTGCCCGACAACTCGCCGCGCTACGGCAAGCGCGCGACCGCCACGGGGCTGCAGCTGACCGTCGGCAAC GTCGCCGGCATCCTCTCCGGCTTCATCTACCCCAAGGAAGATGCGCCGAGGTACGTGCGCGGCCACGCCATCACG CTGGCCATGGTGGCCATGGGGACCGCCATCTATGGCCTCATGTGGCTCTGGTTCCGGCGCGAGAACCGCCGCCGC GAGCGCGAGCCGCTGGCCGAGGAGCACCGTCGGATGAAGGAGGACGAGCTGGAGGAGCTGGGCGACGACAGCCCG CGATACCGATACATGACTTGA |
Gene | >Hirsu2|5219 CTGCCAAAAAAAAAAGGCTTCTCGACCTTCCTGCCGACCATCATCAACGACCTCGGCCGCTGGACGCTGCCGCAG GTCCAGCTGCTGACGGTGCCGTGCTACTTCGTCGGCGCCGCCGCCTACATGGCCGCCGCCGCCGCCTCGGACCGC ACCCAGCGCCGCGGGCCCTTCTGCGTCGCCTTCGGCCTCGTCAGCATCCTCGGCTACGCCCTGCTGCTGGCCGAC GCCGCGCCCGCCCTGCACTACTTCGCCTGCTTCCTCGTCGCCGCCGGCCTGTACGTCGTCGTCGGCCTGCCGCTC GCCTGGCTGCCCGACAACTCGCCGCGCTACGGCAAGCGCGCGACCGCCACGGGGCTGCAGCTGACCGTCGGCAAC GTCGCCGGCATCCTCTCCGGCTTCATCTAGTGCGTCCGCTCCCTTCTTTTCTCATCTCTCCCTTCTTCTTCCTTC TCCTCCCCGTCTTCGTGTCGTCAGCCGTCGTCTTGGTCCTGTATGTTTCGCCGCTGACGACAAGACGGAAAAGCC CCAAGGAAGATGCGCCGAGGTACGTGCGCGGCCACGCCATCACGCTGGCCATGGTGGCCATGGGGACCGCCATCT ATGGCCTCATGTGGCTCTGGTTCCGGCGCGAGAACCGCCGCCGCGAGCGCGAGCCGCTGGCCGAGGAGCACCGTC GGATGAAGGAGGACGAGCTGGAGGAGCTGGGCGACGACAGCCCGCGATACCGATACATGACTTGA |