Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5219
Gene name
LocationContig_2600:57..797
Strand+
Gene length (bp)740
Transcript length (bp)621
Coding sequence length (bp)621
Protein length (aa) 207

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 9.8E-10 6 131

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 6 204 2.0E-34
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 6 205 3.0E-34
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 6 205 2.0E-31
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 6 193 7.0E-24
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 5 204 3.0E-14

GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0009987 cellular process No
GO:0051179 localization No
GO:0005215 transporter activity No
GO:0008150 biological_process No
GO:0051234 establishment of localization No
GO:0003674 molecular_function No
GO:0006810 transport No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Golgi apparatus 0.1632 0.0736 0.1228 0.3088 0.1608 0.0604 0.5259 0.0769 0.7236 0.0038

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 26 48 22
2 55 74 19
3 79 101 22
4 114 136 22
5 146 168 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup3024
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|835
Ophiocordyceps australis map64 (Brazil) OphauB2|1427
Ophiocordyceps australis map64 (Brazil) OphauB2|4545
Ophiocordyceps camponoti-floridani Ophcf2|03135
Ophiocordyceps camponoti-rufipedis Ophun1|151
Ophiocordyceps kimflemingae Ophio5|8156
Ophiocordyceps subramaniannii Hirsu2|5219 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5219
LPKKKGFSTFLPTIINDLGRWTLPQVQLLTVPCYFVGAAAYMAAAAASDRTQRRGPFCVAFGLVSILGYALLLAD
AAPALHYFACFLVAAGLYVVVGLPLAWLPDNSPRYGKRATATGLQLTVGNVAGILSGFIYPKEDAPRYVRGHAIT
LAMVAMGTAIYGLMWLWFRRENRRREREPLAEEHRRMKEDELEELGDDSPRYRYMT*
Coding >Hirsu2|5219
CTGCCAAAAAAAAAAGGCTTCTCGACCTTCCTGCCGACCATCATCAACGACCTCGGCCGCTGGACGCTGCCGCAG
GTCCAGCTGCTGACGGTGCCGTGCTACTTCGTCGGCGCCGCCGCCTACATGGCCGCCGCCGCCGCCTCGGACCGC
ACCCAGCGCCGCGGGCCCTTCTGCGTCGCCTTCGGCCTCGTCAGCATCCTCGGCTACGCCCTGCTGCTGGCCGAC
GCCGCGCCCGCCCTGCACTACTTCGCCTGCTTCCTCGTCGCCGCCGGCCTGTACGTCGTCGTCGGCCTGCCGCTC
GCCTGGCTGCCCGACAACTCGCCGCGCTACGGCAAGCGCGCGACCGCCACGGGGCTGCAGCTGACCGTCGGCAAC
GTCGCCGGCATCCTCTCCGGCTTCATCTACCCCAAGGAAGATGCGCCGAGGTACGTGCGCGGCCACGCCATCACG
CTGGCCATGGTGGCCATGGGGACCGCCATCTATGGCCTCATGTGGCTCTGGTTCCGGCGCGAGAACCGCCGCCGC
GAGCGCGAGCCGCTGGCCGAGGAGCACCGTCGGATGAAGGAGGACGAGCTGGAGGAGCTGGGCGACGACAGCCCG
CGATACCGATACATGACTTGA
Transcript >Hirsu2|5219
CTGCCAAAAAAAAAAGGCTTCTCGACCTTCCTGCCGACCATCATCAACGACCTCGGCCGCTGGACGCTGCCGCAG
GTCCAGCTGCTGACGGTGCCGTGCTACTTCGTCGGCGCCGCCGCCTACATGGCCGCCGCCGCCGCCTCGGACCGC
ACCCAGCGCCGCGGGCCCTTCTGCGTCGCCTTCGGCCTCGTCAGCATCCTCGGCTACGCCCTGCTGCTGGCCGAC
GCCGCGCCCGCCCTGCACTACTTCGCCTGCTTCCTCGTCGCCGCCGGCCTGTACGTCGTCGTCGGCCTGCCGCTC
GCCTGGCTGCCCGACAACTCGCCGCGCTACGGCAAGCGCGCGACCGCCACGGGGCTGCAGCTGACCGTCGGCAAC
GTCGCCGGCATCCTCTCCGGCTTCATCTACCCCAAGGAAGATGCGCCGAGGTACGTGCGCGGCCACGCCATCACG
CTGGCCATGGTGGCCATGGGGACCGCCATCTATGGCCTCATGTGGCTCTGGTTCCGGCGCGAGAACCGCCGCCGC
GAGCGCGAGCCGCTGGCCGAGGAGCACCGTCGGATGAAGGAGGACGAGCTGGAGGAGCTGGGCGACGACAGCCCG
CGATACCGATACATGACTTGA
Gene >Hirsu2|5219
CTGCCAAAAAAAAAAGGCTTCTCGACCTTCCTGCCGACCATCATCAACGACCTCGGCCGCTGGACGCTGCCGCAG
GTCCAGCTGCTGACGGTGCCGTGCTACTTCGTCGGCGCCGCCGCCTACATGGCCGCCGCCGCCGCCTCGGACCGC
ACCCAGCGCCGCGGGCCCTTCTGCGTCGCCTTCGGCCTCGTCAGCATCCTCGGCTACGCCCTGCTGCTGGCCGAC
GCCGCGCCCGCCCTGCACTACTTCGCCTGCTTCCTCGTCGCCGCCGGCCTGTACGTCGTCGTCGGCCTGCCGCTC
GCCTGGCTGCCCGACAACTCGCCGCGCTACGGCAAGCGCGCGACCGCCACGGGGCTGCAGCTGACCGTCGGCAAC
GTCGCCGGCATCCTCTCCGGCTTCATCTAGTGCGTCCGCTCCCTTCTTTTCTCATCTCTCCCTTCTTCTTCCTTC
TCCTCCCCGTCTTCGTGTCGTCAGCCGTCGTCTTGGTCCTGTATGTTTCGCCGCTGACGACAAGACGGAAAAGCC
CCAAGGAAGATGCGCCGAGGTACGTGCGCGGCCACGCCATCACGCTGGCCATGGTGGCCATGGGGACCGCCATCT
ATGGCCTCATGTGGCTCTGGTTCCGGCGCGAGAACCGCCGCCGCGAGCGCGAGCCGCTGGCCGAGGAGCACCGTC
GGATGAAGGAGGACGAGCTGGAGGAGCTGGGCGACGACAGCCCGCGATACCGATACATGACTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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