© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|5218 |
| Gene name | |
| Location | Contig_260:24478..26443 |
| Strand | + |
| Gene length (bp) | 1965 |
| Transcript length (bp) | 1905 |
| Coding sequence length (bp) | 1905 |
| Protein length (aa) | 635 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.0908 | 0.0772 | 0.9694 | 0.0546 | 0.0753 | 0.009 | 0.1251 | 0.0655 | 0.1508 | 0.0026 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 17 | 0.994371 |
| Orthofinder run ID | 4 |
| Orthogroup | 9821 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|5218 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|5218 MRSAYLPLFLAVASATASEQADVKSNVDARQNIPAARDAGNVLNDDNTRSEPLGSDKGEDEGTLGDILRDSGGLG SLLGGLLGGGASGDKRGGSADLDLGGMMGGVLAKNPELLGGLLGGMLGGQDGQHEKKRDEPAEQGLGGMLGGLLA SNPGMVGGLMAGLLGGETGKERRGGSADANLSGVLGSLLGSSSEIMDEFLKGMKENRESEDGNDKVDDEQRDDVK RDDEKRDDVQHNDVKHDDKRDDIKHDDVKRGGEKRDEESLDADRAASLGAQLGGSAALFSMLGGILGGYQTQGDN KKGGKSSNQDLNRVLGSLIESGAFAGLLAGLLGSKDNEKGDGSDDVDIDAVVGAVGSLLSTGALDKILGGLLGGD GEDQGSHGDKEHEKRDEALGTNLLGSLLQNGALDGIIEGFLTQHGPEGEKAQEKRNDSMDLGAMLGGLVSSGALG GMLDGLAAADGEEKEKRAAPAQPDLGDALGGLLQSGGLEGLLEGFLAKHAGDGEKAQGKCPFGMDVKADAGDAAD SEPPGSRDSGKEKRGEAAGETDSSDGLDLNGVMGSILSNSGVMAGMMNEMLHKLNLKTRPGEPQETQAGQDLGNV LGELLGGILGKGVAADGKSGGHQQREAEAETSSG* |
| Coding | >Hirsu2|5218 ATGAGATCTGCTTACCTTCCTCTCTTCCTCGCCGTGGCCTCGGCCACCGCTTCAGAGCAAGCCGATGTCAAATCC AATGTGGATGCCAGGCAGAACATCCCCGCGGCTCGAGACGCTGGAAACGTCTTGAACGATGACAACACACGCAGC GAGCCGCTCGGGTCGGACAAGGGCGAAGACGAAGGCACGCTTGGAGACATACTGCGCGACAGCGGAGGCCTCGGC AGCTTGCTCGGCGGCCTCCTCGGCGGCGGCGCAAGCGGAGACAAGCGCGGCGGCTCGGCCGACCTGGACCTGGGC GGCATGATGGGAGGCGTCCTCGCAAAGAACCCGGAGCTGCTCGGCGGACTCCTCGGCGGCATGCTCGGCGGCCAG GACGGGCAACACGAGAAGAAACGCGACGAGCCGGCCGAACAGGGTCTCGGCGGCATGCTGGGAGGCCTGCTCGCC AGCAACCCGGGCATGGTCGGCGGCTTGATGGCGGGCCTCCTCGGAGGCGAGACCGGCAAGGAGAGGCGGGGCGGG TCGGCCGACGCCAACCTGAGTGGCGTGCTCGGAAGCCTCCTGGGCAGCAGCTCAGAGATCATGGACGAGTTCTTG AAGGGTATGAAGGAGAACCGGGAAAGCGAAGACGGAAACGACAAGGTCGACGACGAGCAGCGTGACGACGTTAAG CGTGACGACGAGAAGCGTGACGACGTCCAGCATAACGACGTCAAGCACGACGACAAGCGCGACGATATTAAGCAC GACGACGTCAAGCGCGGCGGCGAGAAGCGCGACGAAGAGTCGCTCGATGCGGATCGCGCCGCCTCGCTGGGAGCT CAGCTGGGCGGCAGTGCTGCCCTTTTTAGCATGCTGGGCGGCATCCTCGGCGGCTACCAAACACAAGGCGACAAT AAGAAAGGCGGCAAGTCTTCCAACCAGGATCTAAATCGCGTGCTGGGCAGTCTCATCGAAAGCGGCGCATTCGCC GGCCTGCTTGCTGGCCTGTTGGGCAGCAAGGACAACGAGAAGGGCGACGGGTCTGACGATGTGGACATCGACGCC GTGGTGGGAGCTGTGGGAAGTCTGCTAAGCACGGGAGCGCTCGACAAGATACTCGGCGGCCTCCTCGGCGGCGAC GGCGAGGACCAGGGCAGCCACGGCGACAAGGAGCACGAGAAGCGCGATGAAGCCCTGGGGACGAACCTGCTCGGC AGTCTTCTTCAGAACGGAGCCCTGGACGGCATCATCGAGGGATTCCTGACGCAGCACGGGCCGGAGGGCGAGAAG GCGCAGGAGAAGCGCAACGATTCCATGGACCTCGGTGCCATGCTTGGAGGCCTCGTCAGCAGCGGTGCTCTCGGC GGCATGCTGGACGGTCTAGCGGCCGCCGACGGCGAGGAAAAGGAGAAGCGGGCGGCGCCTGCGCAGCCGGATCTC GGCGACGCATTGGGCGGCCTCTTGCAGAGCGGAGGGCTGGAGGGCCTGCTGGAGGGATTCCTGGCCAAGCACGCG GGCGACGGCGAGAAGGCGCAGGGGAAATGCCCGTTTGGCATGGACGTCAAAGCGGACGCCGGCGATGCCGCCGAC AGCGAGCCACCCGGCAGTCGGGACAGCGGCAAAGAGAAGCGCGGCGAGGCGGCGGGCGAGACCGACAGCAGCGAC GGCCTGGACCTCAACGGCGTGATGGGGTCGATTCTGAGCAACAGCGGCGTTATGGCCGGAATGATGAACGAGATG CTGCACAAGCTCAACCTCAAGACGAGGCCAGGCGAGCCGCAGGAGACGCAGGCCGGTCAGGACCTGGGCAACGTG CTGGGCGAGCTCCTGGGCGGCATACTGGGCAAGGGCGTCGCGGCAGATGGCAAATCGGGGGGGCACCAGCAGCGG GAGGCCGAAGCCGAGACGTCGTCCGGGTAG |
| Transcript | >Hirsu2|5218 ATGAGATCTGCTTACCTTCCTCTCTTCCTCGCCGTGGCCTCGGCCACCGCTTCAGAGCAAGCCGATGTCAAATCC AATGTGGATGCCAGGCAGAACATCCCCGCGGCTCGAGACGCTGGAAACGTCTTGAACGATGACAACACACGCAGC GAGCCGCTCGGGTCGGACAAGGGCGAAGACGAAGGCACGCTTGGAGACATACTGCGCGACAGCGGAGGCCTCGGC AGCTTGCTCGGCGGCCTCCTCGGCGGCGGCGCAAGCGGAGACAAGCGCGGCGGCTCGGCCGACCTGGACCTGGGC GGCATGATGGGAGGCGTCCTCGCAAAGAACCCGGAGCTGCTCGGCGGACTCCTCGGCGGCATGCTCGGCGGCCAG GACGGGCAACACGAGAAGAAACGCGACGAGCCGGCCGAACAGGGTCTCGGCGGCATGCTGGGAGGCCTGCTCGCC AGCAACCCGGGCATGGTCGGCGGCTTGATGGCGGGCCTCCTCGGAGGCGAGACCGGCAAGGAGAGGCGGGGCGGG TCGGCCGACGCCAACCTGAGTGGCGTGCTCGGAAGCCTCCTGGGCAGCAGCTCAGAGATCATGGACGAGTTCTTG AAGGGTATGAAGGAGAACCGGGAAAGCGAAGACGGAAACGACAAGGTCGACGACGAGCAGCGTGACGACGTTAAG CGTGACGACGAGAAGCGTGACGACGTCCAGCATAACGACGTCAAGCACGACGACAAGCGCGACGATATTAAGCAC GACGACGTCAAGCGCGGCGGCGAGAAGCGCGACGAAGAGTCGCTCGATGCGGATCGCGCCGCCTCGCTGGGAGCT CAGCTGGGCGGCAGTGCTGCCCTTTTTAGCATGCTGGGCGGCATCCTCGGCGGCTACCAAACACAAGGCGACAAT AAGAAAGGCGGCAAGTCTTCCAACCAGGATCTAAATCGCGTGCTGGGCAGTCTCATCGAAAGCGGCGCATTCGCC GGCCTGCTTGCTGGCCTGTTGGGCAGCAAGGACAACGAGAAGGGCGACGGGTCTGACGATGTGGACATCGACGCC GTGGTGGGAGCTGTGGGAAGTCTGCTAAGCACGGGAGCGCTCGACAAGATACTCGGCGGCCTCCTCGGCGGCGAC GGCGAGGACCAGGGCAGCCACGGCGACAAGGAGCACGAGAAGCGCGATGAAGCCCTGGGGACGAACCTGCTCGGC AGTCTTCTTCAGAACGGAGCCCTGGACGGCATCATCGAGGGATTCCTGACGCAGCACGGGCCGGAGGGCGAGAAG GCGCAGGAGAAGCGCAACGATTCCATGGACCTCGGTGCCATGCTTGGAGGCCTCGTCAGCAGCGGTGCTCTCGGC GGCATGCTGGACGGTCTAGCGGCCGCCGACGGCGAGGAAAAGGAGAAGCGGGCGGCGCCTGCGCAGCCGGATCTC GGCGACGCATTGGGCGGCCTCTTGCAGAGCGGAGGGCTGGAGGGCCTGCTGGAGGGATTCCTGGCCAAGCACGCG GGCGACGGCGAGAAGGCGCAGGGGAAATGCCCGTTTGGCATGGACGTCAAAGCGGACGCCGGCGATGCCGCCGAC AGCGAGCCACCCGGCAGTCGGGACAGCGGCAAAGAGAAGCGCGGCGAGGCGGCGGGCGAGACCGACAGCAGCGAC GGCCTGGACCTCAACGGCGTGATGGGGTCGATTCTGAGCAACAGCGGCGTTATGGCCGGAATGATGAACGAGATG CTGCACAAGCTCAACCTCAAGACGAGGCCAGGCGAGCCGCAGGAGACGCAGGCCGGTCAGGACCTGGGCAACGTG CTGGGCGAGCTCCTGGGCGGCATACTGGGCAAGGGCGTCGCGGCAGATGGCAAATCGGGGGGGCACCAGCAGCGG GAGGCCGAAGCCGAGACGTCGTCCGGGTAG |
| Gene | >Hirsu2|5218 ATGAGATCTGCTTACCTTCCTCTCTTCCTCGCCGTGGCCTCGGCCACCGCTTCAGAGGTGAGAACTGTCGAATCG ATCCGACCCTGACCCCCAGTACGTGCTAACCAACGAGTCCAGCAAGCCGATGTCAAATCCAATGTGGATGCCAGG CAGAACATCCCCGCGGCTCGAGACGCTGGAAACGTCTTGAACGATGACAACACACGCAGCGAGCCGCTCGGGTCG GACAAGGGCGAAGACGAAGGCACGCTTGGAGACATACTGCGCGACAGCGGAGGCCTCGGCAGCTTGCTCGGCGGC CTCCTCGGCGGCGGCGCAAGCGGAGACAAGCGCGGCGGCTCGGCCGACCTGGACCTGGGCGGCATGATGGGAGGC GTCCTCGCAAAGAACCCGGAGCTGCTCGGCGGACTCCTCGGCGGCATGCTCGGCGGCCAGGACGGGCAACACGAG AAGAAACGCGACGAGCCGGCCGAACAGGGTCTCGGCGGCATGCTGGGAGGCCTGCTCGCCAGCAACCCGGGCATG GTCGGCGGCTTGATGGCGGGCCTCCTCGGAGGCGAGACCGGCAAGGAGAGGCGGGGCGGGTCGGCCGACGCCAAC CTGAGTGGCGTGCTCGGAAGCCTCCTGGGCAGCAGCTCAGAGATCATGGACGAGTTCTTGAAGGGTATGAAGGAG AACCGGGAAAGCGAAGACGGAAACGACAAGGTCGACGACGAGCAGCGTGACGACGTTAAGCGTGACGACGAGAAG CGTGACGACGTCCAGCATAACGACGTCAAGCACGACGACAAGCGCGACGATATTAAGCACGACGACGTCAAGCGC GGCGGCGAGAAGCGCGACGAAGAGTCGCTCGATGCGGATCGCGCCGCCTCGCTGGGAGCTCAGCTGGGCGGCAGT GCTGCCCTTTTTAGCATGCTGGGCGGCATCCTCGGCGGCTACCAAACACAAGGCGACAATAAGAAAGGCGGCAAG TCTTCCAACCAGGATCTAAATCGCGTGCTGGGCAGTCTCATCGAAAGCGGCGCATTCGCCGGCCTGCTTGCTGGC CTGTTGGGCAGCAAGGACAACGAGAAGGGCGACGGGTCTGACGATGTGGACATCGACGCCGTGGTGGGAGCTGTG GGAAGTCTGCTAAGCACGGGAGCGCTCGACAAGATACTCGGCGGCCTCCTCGGCGGCGACGGCGAGGACCAGGGC AGCCACGGCGACAAGGAGCACGAGAAGCGCGATGAAGCCCTGGGGACGAACCTGCTCGGCAGTCTTCTTCAGAAC GGAGCCCTGGACGGCATCATCGAGGGATTCCTGACGCAGCACGGGCCGGAGGGCGAGAAGGCGCAGGAGAAGCGC AACGATTCCATGGACCTCGGTGCCATGCTTGGAGGCCTCGTCAGCAGCGGTGCTCTCGGCGGCATGCTGGACGGT CTAGCGGCCGCCGACGGCGAGGAAAAGGAGAAGCGGGCGGCGCCTGCGCAGCCGGATCTCGGCGACGCATTGGGC GGCCTCTTGCAGAGCGGAGGGCTGGAGGGCCTGCTGGAGGGATTCCTGGCCAAGCACGCGGGCGACGGCGAGAAG GCGCAGGGGAAATGCCCGTTTGGCATGGACGTCAAAGCGGACGCCGGCGATGCCGCCGACAGCGAGCCACCCGGC AGTCGGGACAGCGGCAAAGAGAAGCGCGGCGAGGCGGCGGGCGAGACCGACAGCAGCGACGGCCTGGACCTCAAC GGCGTGATGGGGTCGATTCTGAGCAACAGCGGCGTTATGGCCGGAATGATGAACGAGATGCTGCACAAGCTCAAC CTCAAGACGAGGCCAGGCGAGCCGCAGGAGACGCAGGCCGGTCAGGACCTGGGCAACGTGCTGGGCGAGCTCCTG GGCGGCATACTGGGCAAGGGCGTCGCGGCAGATGGCAAATCGGGGGGGCACCAGCAGCGGGAGGCCGAAGCCGAG ACGTCGTCCGGGTAG |