© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|5181 |
| Gene name | |
| Location | Contig_2595:199..2051 |
| Strand | - |
| Gene length (bp) | 1852 |
| Transcript length (bp) | 1029 |
| Coding sequence length (bp) | 1029 |
| Protein length (aa) | 343 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF09729 | Gti1_Pac2 | Gti1/Pac2 family | 8.3E-37 | 166 | 247 |
| PF09729 | Gti1_Pac2 | Gti1/Pac2 family | 3.8E-05 | 279 | 309 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q10294|PAC2_SCHPO | cAMP-independent regulatory protein pac2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pac2 PE=2 SV=1 | 164 | 340 | 2.0E-64 |
| sp|W7MPI5|WOR1_GIBM7 | Global transcription regulator sge1 OS=Gibberella moniliformis (strain M3125 / FGSC 7600) GN=sge1 PE=3 SV=1 | 166 | 332 | 1.0E-27 |
| sp|S0E3H0|WOR1_GIBF5 | Global transcription regulator sge1 OS=Gibberella fujikuroi (strain CBS 195.34 / IMI 58289 / NRRL A-6831) GN=sge1 PE=2 SV=1 | 166 | 332 | 2.0E-27 |
| sp|J9N5P9|WOR1_FUSO4 | Global transcription regulator sge1 OS=Fusarium oxysporum f. sp. lycopersici (strain 4287 / CBS 123668 / FGSC 9935 / NRRL 34936) GN=sge1 PE=2 SV=1 | 166 | 332 | 7.0E-25 |
| sp|I1S5P3|WOR1_GIBZE | Global transcription regulator FGP1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=FGP1 PE=3 SV=1 | 166 | 309 | 2.0E-21 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q10294|PAC2_SCHPO | cAMP-independent regulatory protein pac2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pac2 PE=2 SV=1 | 164 | 340 | 2.0E-64 |
| sp|W7MPI5|WOR1_GIBM7 | Global transcription regulator sge1 OS=Gibberella moniliformis (strain M3125 / FGSC 7600) GN=sge1 PE=3 SV=1 | 166 | 332 | 1.0E-27 |
| sp|S0E3H0|WOR1_GIBF5 | Global transcription regulator sge1 OS=Gibberella fujikuroi (strain CBS 195.34 / IMI 58289 / NRRL A-6831) GN=sge1 PE=2 SV=1 | 166 | 332 | 2.0E-27 |
| sp|J9N5P9|WOR1_FUSO4 | Global transcription regulator sge1 OS=Fusarium oxysporum f. sp. lycopersici (strain 4287 / CBS 123668 / FGSC 9935 / NRRL 34936) GN=sge1 PE=2 SV=1 | 166 | 332 | 7.0E-25 |
| sp|I1S5P3|WOR1_GIBZE | Global transcription regulator FGP1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=FGP1 PE=3 SV=1 | 166 | 309 | 2.0E-21 |
| sp|O14367|GTI1_SCHPO | Gluconate transport inducer 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gti1 PE=4 SV=1 | 159 | 247 | 3.0E-20 |
| sp|G2X740|WOR1_VERDV | Global transcription regulator sge1 OS=Verticillium dahliae (strain VdLs.17 / ATCC MYA-4575 / FGSC 10137) GN=sge1 PE=3 SV=1 | 166 | 332 | 2.0E-19 |
| sp|P38867|YHX7_YEAST | Uncharacterized protein YHR177W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YHR177W PE=1 SV=2 | 162 | 332 | 1.0E-17 |
| sp|P40002|MIT1_YEAST | Transcriptional regulator MIT1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MIT1 PE=1 SV=1 | 162 | 332 | 2.0E-17 |
| sp|Q5AP80|WOR1_CANAL | White-opaque regulator 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=WOR1 PE=1 SV=1 | 166 | 243 | 6.0E-14 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Endoplasmic reticulum | Signal peptide | 0.2881 | 0.2926 | 0.3555 | 0.234 | 0.2393 | 0.3086 | 0.6298 | 0.3147 | 0.2049 | 0.6223 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 19 | 0.514544 |
| Orthofinder run ID | 4 |
| Orthogroup | 3007 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|5181 LLLFLPLLCLAAASSSAAAASSAASASASFSSGLASAAAADSLLNAIAAPLAAAILLRDGLVRLRHRPSRRATLA PPLASSPHAALRLLLCLVSVLLAESTSRVSSRRRCRHSEATHPLSTGGLKCWEPCRLEPIVSSPASATANRPASA GTANPPSETDPDRMETYHGYVRTPGDAIKLFEACRLGLLPRVQRRLSEKERQSIRSGSVFVWDEREAGMRRWTDG KSWSASRVSGSFLTYREMEGKRGGGFGSGRRGAGKTPDSGRGSDEDHDDGEPEGYRYKADGLMKQSFSITTSTNQ HLHLISYYSRPQPGQPDLNQPSSDPSLRGIVPPKGMYPDSRT* |
| Coding | >Hirsu2|5181 CTGCTCCTATTCCTGCCGCTCCTCTGCCTCGCCGCCGCCTCCTCCTCCGCCGCCGCCGCCTCCTCCGCCGCCTCC GCCTCCGCCAGCTTCTCCTCCGGCCTCGCCTCAGCAGCAGCGGCAGACTCGCTCCTCAACGCCATCGCCGCCCCC CTCGCCGCCGCCATCCTCCTCCGCGACGGCCTCGTCCGCCTCCGCCACCGACCGAGCCGACGAGCCACCCTCGCG CCGCCTCTGGCCTCGAGCCCTCACGCCGCTCTTCGACTCCTGCTCTGCCTCGTCAGTGTCCTCCTGGCCGAGTCT ACCTCACGAGTCTCCTCCCGCCGCAGGTGCCGCCATAGTGAGGCCACGCACCCCTTGTCCACCGGGGGGCTCAAG TGTTGGGAGCCCTGCCGACTGGAGCCCATCGTCTCATCGCCTGCCAGCGCCACGGCAAATCGTCCTGCGTCCGCA GGCACGGCCAATCCACCGTCTGAAACGGACCCGGACAGGATGGAGACGTACCACGGCTACGTGCGCACCCCCGGC GACGCCATCAAGCTGTTCGAGGCCTGCCGCCTGGGCCTGCTGCCGCGCGTCCAGCGCCGGCTGTCGGAGAAGGAG CGGCAGTCGATCCGCTCCGGCTCCGTCTTCGTCTGGGACGAGCGCGAGGCCGGCATGCGGAGGTGGACCGACGGC AAGTCGTGGAGCGCCAGCCGCGTCTCCGGCAGCTTCCTGACCTACCGCGAGATGGAGGGCAAGCGCGGCGGCGGC TTCGGCAGCGGCCGGAGGGGCGCCGGCAAGACGCCCGACTCGGGCCGCGGCAGCGACGAGGACCACGACGACGGC GAGCCCGAGGGCTACCGCTACAAGGCCGACGGCCTGATGAAGCAGTCGTTCAGCATCACCACCTCGACCAACCAG CACCTGCACCTCATCTCCTACTACTCGCGCCCCCAGCCGGGCCAGCCCGACCTCAACCAGCCGAGCTCCGACCCG TCCCTGCGCGGCATCGTCCCGCCCAAGGGCATGTACCCCGACAGCCGTACATGA |
| Transcript | >Hirsu2|5181 CTGCTCCTATTCCTGCCGCTCCTCTGCCTCGCCGCCGCCTCCTCCTCCGCCGCCGCCGCCTCCTCCGCCGCCTCC GCCTCCGCCAGCTTCTCCTCCGGCCTCGCCTCAGCAGCAGCGGCAGACTCGCTCCTCAACGCCATCGCCGCCCCC CTCGCCGCCGCCATCCTCCTCCGCGACGGCCTCGTCCGCCTCCGCCACCGACCGAGCCGACGAGCCACCCTCGCG CCGCCTCTGGCCTCGAGCCCTCACGCCGCTCTTCGACTCCTGCTCTGCCTCGTCAGTGTCCTCCTGGCCGAGTCT ACCTCACGAGTCTCCTCCCGCCGCAGGTGCCGCCATAGTGAGGCCACGCACCCCTTGTCCACCGGGGGGCTCAAG TGTTGGGAGCCCTGCCGACTGGAGCCCATCGTCTCATCGCCTGCCAGCGCCACGGCAAATCGTCCTGCGTCCGCA GGCACGGCCAATCCACCGTCTGAAACGGACCCGGACAGGATGGAGACGTACCACGGCTACGTGCGCACCCCCGGC GACGCCATCAAGCTGTTCGAGGCCTGCCGCCTGGGCCTGCTGCCGCGCGTCCAGCGCCGGCTGTCGGAGAAGGAG CGGCAGTCGATCCGCTCCGGCTCCGTCTTCGTCTGGGACGAGCGCGAGGCCGGCATGCGGAGGTGGACCGACGGC AAGTCGTGGAGCGCCAGCCGCGTCTCCGGCAGCTTCCTGACCTACCGCGAGATGGAGGGCAAGCGCGGCGGCGGC TTCGGCAGCGGCCGGAGGGGCGCCGGCAAGACGCCCGACTCGGGCCGCGGCAGCGACGAGGACCACGACGACGGC GAGCCCGAGGGCTACCGCTACAAGGCCGACGGCCTGATGAAGCAGTCGTTCAGCATCACCACCTCGACCAACCAG CACCTGCACCTCATCTCCTACTACTCGCGCCCCCAGCCGGGCCAGCCCGACCTCAACCAGCCGAGCTCCGACCCG TCCCTGCGCGGCATCGTCCCGCCCAAGGGCATGTACCCCGACAGCCGTACATGA |
| Gene | >Hirsu2|5181 CTGCTCCTATTCCTGCCGCTCCTCTGCCTCGCCGCCGCCTCCTCCTCCGCCGCCGCCGCCTCCTCCGCCGCCTCC GCCTCCGCCAGCTTCTCCTCCGGCCTCGCCTCAGCAGCAGCGGCAGACTCGCTCCTCAACGCCATCGCCGCCCCC CTCGCCGCCGCCATCCTCCTCCGCGACGGCCTCGTCCGCCTCCGCCACCGACCGAGCCGACGAGCCACCCTCGCG CCGCCTCTGGCCTCGAGCCCTCACGCCGCTCTTCGACTCCTGCTCTGCCTCGTCAGGTAAGGCTCCCTCGCCGAA ACGCCCTGCCACGATGCACAACAACCACAAGAGAGGCGCACGTCGTCTAGCTTTCCACACATGGCTCCCGCCGTT CCTGTCGCTTCCCGCCGCTCCTGGCCACAAGGGCCCTCTCGTCGGCTTCCCTGCCCAAGCCGCCGCCAGTGCGAG CGCGCGCAACCGTCACCCAGCCCTCGCCTAATCCTGTCTCCCGACTCCTCCTGCCTCTCTCCTCCGCCTCTTCTC CCTCTCATCTCTCCTCCACCTCTGCTCGTGACCACCTCGCCTCACCACCGCTGTCCTCCTCGTCTCAAGTCCCGT CATGCACTTCGCCGAGCGGCGACACGGCACGGCACGGCACTTCGACTCGAGCCGAGCCTGTCCGTCGCGCTGGAA CCTGCTGTGTCCGCTTGTGCCTGAGCCGACTGGCCACGCAAACCGCCGTGTTTGCGCCCGGCCAGCGCCCACGCG CCGCTGCCCGGTGAAATCCCGTCTTCGCGCCTTGTGCTCGCCAGTCGTGCACGCGCTTGCCTGCCTTGGATGCTA CCCCAGACGCACTCACGCACCCACACCCACCCACACACAAAGGGGGAGAGAGGGGAGAGGGAGGCTGGCTGGTTT GGTTGGACCACAAAGACACGCGATGCGTCGCCTCAGACAAAAAGGAGGAAGAAGAAAAAAAAAAAAAAGTCGGCC CCGGTCGAGCCCCCACGCCTGCACCCGCACCTGAAATATGGACGGCAGGCTCCTGAAACTGACGTGCCAAACAGT GTCCTCCTGGCCGAGTCTACCTCACGAGTCTCCTCCCGCCGCAGGTGCCGCCATAGTGAGGCCACGCACCCCTTG TCCACCGGGGGGCTCAAGTGTTGGGAGCCCTGCCGACTGGAGCCCATCGTCTCATCGCCTGCCAGCGCCACGGCA AATCGTCCTGCGTCCGCAGGCACGGCCAATCCACCGTCTGAAACGGACCCGGACAGGATGGAGACGTACCACGGC TACGTGCGCACCCCCGGCGACGCCATCAAGCTGTTCGAGGCCTGCCGCCTGGGCCTGCTGCCGCGCGTCCAGCGC CGGCTGTCGGAGAAGGAGCGGCAGTCGATCCGCTCCGGCTCCGTCTTCGTCTGGGACGAGCGCGAGGCCGGCATG CGGAGGTGGACCGACGGCAAGTCGTGGAGCGCCAGCCGCGTCTCCGGCAGCTTCCTGACCTACCGCGAGATGGAG GGCAAGCGCGGCGGCGGCTTCGGCAGCGGCCGGAGGGGCGCCGGCAAGACGCCCGACTCGGGCCGCGGCAGCGAC GAGGACCACGACGACGGCGAGCCCGAGGGCTACCGCTACAAGGCCGACGGCCTGATGAAGCAGTCGTTCAGCATC ACCACCTCGACCAACCAGCACCTGCACCTCATCTCCTACTACTCGCGCCCCCAGCCGGGCCAGCCCGACCTCAAC CAGCCGAGCTCCGACCCGTCCCTGCGCGGCATCGTCCCGCCCAAGGGCATGTACCCCGAGTCGAGCATGGGCGAG ACGAACCAGACGCCCGCCCTGACGCGCGCCCCGATGCAGCAGCCGTACATGA |