Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|518
Gene name
LocationContig_11:74387..75215
Strand-
Gene length (bp)828
Transcript length (bp)828
Coding sequence length (bp)828
Protein length (aa) 276

Overview

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PFAM Domains

(None)

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|F2SCC4|SMD_TRIRC Sphingomyelinase D OS=Trichophyton rubrum (strain ATCC MYA-4607 / CBS 118892) GN=TERG_01406 PE=3 SV=1 10 275 6.0E-82
sp|D4AZV8|SMD_ARTBC Sphingomyelinase D OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_01728 PE=3 SV=1 10 275 1.0E-80
sp|Q59332|PLD_CORUL Phospholipase D OS=Corynebacterium ulcerans GN=pld PE=3 SV=1 9 275 7.0E-76
sp|Q59121|PLD_ARCHD Phospholipase D OS=Arcanobacterium haemolyticum (strain ATCC 9345 / DSM 20595 / NBRC 15585 / NCTC 8452 / 11018) GN=pld PE=3 SV=2 2 275 6.0E-74
sp|P20626|PLD_CORPS Phospholipase D OS=Corynebacterium pseudotuberculosis GN=pld PE=1 SV=1 9 275 8.0E-72
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|F2SCC4|SMD_TRIRC Sphingomyelinase D OS=Trichophyton rubrum (strain ATCC MYA-4607 / CBS 118892) GN=TERG_01406 PE=3 SV=1 10 275 6.0E-82
sp|D4AZV8|SMD_ARTBC Sphingomyelinase D OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_01728 PE=3 SV=1 10 275 1.0E-80
sp|Q59332|PLD_CORUL Phospholipase D OS=Corynebacterium ulcerans GN=pld PE=3 SV=1 9 275 7.0E-76
sp|Q59121|PLD_ARCHD Phospholipase D OS=Arcanobacterium haemolyticum (strain ATCC 9345 / DSM 20595 / NBRC 15585 / NCTC 8452 / 11018) GN=pld PE=3 SV=2 2 275 6.0E-74
sp|P20626|PLD_CORPS Phospholipase D OS=Corynebacterium pseudotuberculosis GN=pld PE=1 SV=1 9 275 8.0E-72
sp|C4JUE5|SMD_UNCRE Sphingomyelinase D OS=Uncinocarpus reesii (strain UAMH 1704) GN=UREG_04748 PE=3 SV=1 9 275 9.0E-67
sp|J3K844|SMD_COCIM Sphingomyelinase D OS=Coccidioides immitis (strain RS) GN=CIMG_06182 PE=3 SV=1 8 275 3.0E-59
sp|B8NQ51|SMD_ASPFN Sphingomyelinase D OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=AFLA_004420 PE=1 SV=1 9 275 1.0E-58
sp|C0NUU1|SMD_AJECG Sphingomyelinase D OS=Ajellomyces capsulatus (strain G186AR / H82 / ATCC MYA-2454 / RMSCC 2432) GN=HCBG_06705 PE=3 SV=1 4 275 3.0E-56
sp|C0S3M9|SMD_PARBP Sphingomyelinase D OS=Paracoccidioides brasiliensis (strain Pb03) GN=PABG_02293 PE=3 SV=1 9 275 2.0E-52
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GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.5597 0.2538 0.5199 0.0918 0.2576 0.2898 0.1646 0.2342 0.0722 0.0116

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup36
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2355
Ophiocordyceps australis 1348a (Ghana) OphauG2|7838
Ophiocordyceps australis 1348a (Ghana) OphauG2|6039
Ophiocordyceps australis map64 (Brazil) OphauB2|121
Ophiocordyceps australis map64 (Brazil) OphauB2|6470
Ophiocordyceps australis map64 (Brazil) OphauB2|966
Ophiocordyceps camponoti-floridani Ophcf2|03951
Ophiocordyceps camponoti-floridani Ophcf2|00019
Ophiocordyceps camponoti-rufipedis Ophun1|2814
Ophiocordyceps camponoti-rufipedis Ophun1|3653
Ophiocordyceps camponoti-rufipedis Ophun1|3154
Ophiocordyceps kimflemingae Ophio5|7975
Ophiocordyceps subramaniannii Hirsu2|7387
Ophiocordyceps subramaniannii Hirsu2|5419
Ophiocordyceps subramaniannii Hirsu2|518 (this protein)
Ophiocordyceps subramaniannii Hirsu2|3897
Ophiocordyceps subramaniannii Hirsu2|3863

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|518
MPLQKPPPRPFYAIAHRVLMSYGVRAALAHGANALEIDVHPWRHDKWYADHDGLPTSKGDSVETIFETVAAERRA
GKNVIFVWLDIKDPDNCGRWEDRCNIERLRSLARGILEPVGVKVLYGFYSPKGRGFSIIRDSLNDNEAISLEGNA
DEVRKEYERGGPGEKRKRVMSKGLFYPVLNFGSCETEKKGICPQLRKASESNFFGKVFGWTITRRQQARAELLMR
DAYVDGLIYGFVATHYYDHAHTRQSLSYITDWIKRNPEKRYLATIKDQPW*
Coding >Hirsu2|518
ATGCCGCTCCAGAAGCCGCCCCCTCGACCTTTCTACGCCATCGCACACCGCGTCTTGATGAGCTACGGAGTCCGG
GCAGCGCTGGCGCACGGGGCCAATGCCTTGGAAATAGACGTCCACCCGTGGAGACACGACAAGTGGTACGCGGAC
CACGATGGCTTGCCGACAAGCAAGGGCGATAGCGTCGAGACTATCTTCGAAACCGTGGCGGCAGAGCGACGAGCC
GGCAAGAACGTTATTTTTGTCTGGCTGGATATCAAAGACCCGGATAATTGCGGTAGGTGGGAGGACAGATGCAAC
ATCGAAAGGCTTCGGTCTTTAGCAAGAGGAATCCTCGAGCCGGTCGGAGTTAAAGTCCTCTATGGCTTCTATAGT
CCGAAAGGCAGAGGCTTCAGCATCATCCGAGATAGCTTAAACGATAACGAGGCAATCAGCCTCGAGGGCAACGCG
GACGAGGTCCGGAAGGAATATGAGCGCGGCGGACCCGGCGAAAAGAGGAAGCGCGTGATGAGCAAGGGCCTATTC
TACCCGGTCCTTAACTTTGGATCGTGCGAGACGGAGAAGAAAGGCATCTGCCCCCAGCTGCGCAAGGCGAGCGAG
TCGAACTTTTTCGGGAAGGTATTTGGCTGGACTATTACGCGTCGCCAGCAGGCAAGGGCGGAGCTATTAATGAGA
GACGCGTACGTGGACGGGCTCATCTACGGCTTTGTGGCGACACACTACTACGACCACGCCCACACGCGCCAGAGC
CTCAGCTACATCACGGACTGGATCAAAAGGAATCCGGAGAAGCGATACCTCGCGACGATCAAGGACCAACCATGG
TGA
Transcript >Hirsu2|518
ATGCCGCTCCAGAAGCCGCCCCCTCGACCTTTCTACGCCATCGCACACCGCGTCTTGATGAGCTACGGAGTCCGG
GCAGCGCTGGCGCACGGGGCCAATGCCTTGGAAATAGACGTCCACCCGTGGAGACACGACAAGTGGTACGCGGAC
CACGATGGCTTGCCGACAAGCAAGGGCGATAGCGTCGAGACTATCTTCGAAACCGTGGCGGCAGAGCGACGAGCC
GGCAAGAACGTTATTTTTGTCTGGCTGGATATCAAAGACCCGGATAATTGCGGTAGGTGGGAGGACAGATGCAAC
ATCGAAAGGCTTCGGTCTTTAGCAAGAGGAATCCTCGAGCCGGTCGGAGTTAAAGTCCTCTATGGCTTCTATAGT
CCGAAAGGCAGAGGCTTCAGCATCATCCGAGATAGCTTAAACGATAACGAGGCAATCAGCCTCGAGGGCAACGCG
GACGAGGTCCGGAAGGAATATGAGCGCGGCGGACCCGGCGAAAAGAGGAAGCGCGTGATGAGCAAGGGCCTATTC
TACCCGGTCCTTAACTTTGGATCGTGCGAGACGGAGAAGAAAGGCATCTGCCCCCAGCTGCGCAAGGCGAGCGAG
TCGAACTTTTTCGGGAAGGTATTTGGCTGGACTATTACGCGTCGCCAGCAGGCAAGGGCGGAGCTATTAATGAGA
GACGCGTACGTGGACGGGCTCATCTACGGCTTTGTGGCGACACACTACTACGACCACGCCCACACGCGCCAGAGC
CTCAGCTACATCACGGACTGGATCAAAAGGAATCCGGAGAAGCGATACCTCGCGACGATCAAGGACCAACCATGG
TGA
Gene >Hirsu2|518
ATGCCGCTCCAGAAGCCGCCCCCTCGACCTTTCTACGCCATCGCACACCGCGTCTTGATGAGCTACGGAGTCCGG
GCAGCGCTGGCGCACGGGGCCAATGCCTTGGAAATAGACGTCCACCCGTGGAGACACGACAAGTGGTACGCGGAC
CACGATGGCTTGCCGACAAGCAAGGGCGATAGCGTCGAGACTATCTTCGAAACCGTGGCGGCAGAGCGACGAGCC
GGCAAGAACGTTATTTTTGTCTGGCTGGATATCAAAGACCCGGATAATTGCGGTAGGTGGGAGGACAGATGCAAC
ATCGAAAGGCTTCGGTCTTTAGCAAGAGGAATCCTCGAGCCGGTCGGAGTTAAAGTCCTCTATGGCTTCTATAGT
CCGAAAGGCAGAGGCTTCAGCATCATCCGAGATAGCTTAAACGATAACGAGGCAATCAGCCTCGAGGGCAACGCG
GACGAGGTCCGGAAGGAATATGAGCGCGGCGGACCCGGCGAAAAGAGGAAGCGCGTGATGAGCAAGGGCCTATTC
TACCCGGTCCTTAACTTTGGATCGTGCGAGACGGAGAAGAAAGGCATCTGCCCCCAGCTGCGCAAGGCGAGCGAG
TCGAACTTTTTCGGGAAGGTATTTGGCTGGACTATTACGCGTCGCCAGCAGGCAAGGGCGGAGCTATTAATGAGA
GACGCGTACGTGGACGGGCTCATCTACGGCTTTGTGGCGACACACTACTACGACCACGCCCACACGCGCCAGAGC
CTCAGCTACATCACGGACTGGATCAAAAGGAATCCGGAGAAGCGATACCTCGCGACGATCAAGGACCAACCATGG
TGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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