Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5173
Gene name
LocationContig_259:23484..24616
Strand+
Gene length (bp)1132
Transcript length (bp)870
Coding sequence length (bp)870
Protein length (aa) 290

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11951 Fungal_trans_2 Fungal specific transcription factor domain 3.5E-17 73 198
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 2.9E-08 31 63

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q5A0W9|CZF1_CANAL Zinc cluster transcription factor CZF1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CZF1 PE=1 SV=1 28 75 1.0E-09
sp|P28875|CZF1_CANAW Zinc finger protein 1 OS=Candida albicans (strain WO-1) GN=CZF1 PE=3 SV=2 28 75 1.0E-09
sp|Q05958|ECM22_YEAST Sterol regulatory element-binding protein ECM22 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ECM22 PE=1 SV=1 15 92 7.0E-08
sp|Q59QC7|UPC2_CANAL Sterol uptake control protein 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=UPC2 PE=1 SV=1 3 66 5.0E-07
sp|Q9UT46|MOC3_SCHPO Transcriptional regulatory protein moc3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=moc3 PE=1 SV=4 13 60 1.0E-06
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q5A0W9|CZF1_CANAL Zinc cluster transcription factor CZF1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CZF1 PE=1 SV=1 28 75 1.0E-09
sp|P28875|CZF1_CANAW Zinc finger protein 1 OS=Candida albicans (strain WO-1) GN=CZF1 PE=3 SV=2 28 75 1.0E-09
sp|Q05958|ECM22_YEAST Sterol regulatory element-binding protein ECM22 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ECM22 PE=1 SV=1 15 92 7.0E-08
sp|Q59QC7|UPC2_CANAL Sterol uptake control protein 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=UPC2 PE=1 SV=1 3 66 5.0E-07
sp|Q9UT46|MOC3_SCHPO Transcriptional regulatory protein moc3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=moc3 PE=1 SV=4 13 60 1.0E-06
sp|Q9HDX1|YKN4_SCHPO Uncharacterized transcriptional regulatory protein PB1A11.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB1A11.04c PE=3 SV=1 32 67 2.0E-06
sp|Q6CXS0|OAF3_KLULA Oleate activated transcription factor 3 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=OAF3 PE=3 SV=1 19 82 8.0E-06
sp|O59830|YCUA_SCHPO Uncharacterized transcriptional regulatory protein C965.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC965.10 PE=3 SV=1 24 64 9.0E-06
[Show less]

GO

GO Term Description Terminal node
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific Yes
GO:0008270 zinc ion binding Yes
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0005634 nucleus Yes
GO:0043169 cation binding No
GO:0065007 biological regulation No
GO:0010468 regulation of gene expression No
GO:0019222 regulation of metabolic process No
GO:0050794 regulation of cellular process No
GO:0005488 binding No
GO:0046872 metal ion binding No
GO:0043229 intracellular organelle No
GO:0008150 biological_process No
GO:0051252 regulation of RNA metabolic process No
GO:0009889 regulation of biosynthetic process No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0043226 organelle No
GO:0003674 molecular_function No
GO:0005575 cellular_component No
GO:0060255 regulation of macromolecule metabolic process No
GO:0043231 intracellular membrane-bounded organelle No
GO:0043227 membrane-bounded organelle No
GO:2001141 regulation of RNA biosynthetic process No
GO:0043167 ion binding No
GO:0044424 intracellular part No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0050789 regulation of biological process No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:0044464 cell part No
GO:0031323 regulation of cellular metabolic process No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0080090 regulation of primary metabolic process No
GO:2000112 regulation of cellular macromolecule biosynthetic process No
GO:0140110 transcription regulator activity No
GO:0003700 DNA-binding transcription factor activity No
GO:0046914 transition metal ion binding No
GO:0031326 regulation of cellular biosynthetic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 15 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5173
MADCREDRSSRKPNAARFPTKFRLRHARSKTGCLTCRQRKKKCDETRPSCASCTRSALDCVWPERPDAPKPRYEH
YLGELAVLLQARTSARNPFVTCVLPLAQTDDLLMHAVLAVSGTHLAHKLQDAAHTELATRRHYLRAIRGLHDEIA
NGRVQEKRGMQSLLMALGFLCQYEVLSIAPSSTFAMHLHAMRYIFARVCEGRLDVTDEALCFAYEGYCFLALSNT
ITPSIQPGEVLYDLDIERLHGFRKSPTFGAIFAGSHDLFTLIPRAQQLYRRRLTEEAGGTAGLN*
Coding >Hirsu2|5173
ATGGCCGACTGCCGTGAGGATCGGTCCTCGCGGAAGCCGAACGCGGCCCGCTTCCCGACCAAGTTTCGGCTTCGG
CATGCCCGCTCAAAGACGGGCTGCCTCACATGCCGCCAACGCAAGAAAAAGTGCGACGAGACAAGGCCCAGTTGT
GCCTCGTGCACTCGCAGTGCCCTGGACTGCGTCTGGCCGGAAAGGCCTGACGCCCCGAAGCCACGCTACGAGCAT
TATCTGGGTGAGCTGGCGGTGCTGCTGCAGGCCAGAACTTCCGCGCGGAATCCCTTCGTTACCTGCGTGCTTCCG
CTGGCCCAAACCGACGACCTGCTCATGCACGCCGTCCTGGCCGTCAGCGGGACTCATCTGGCACACAAGCTCCAG
GACGCCGCTCATACCGAGCTAGCCACCCGTCGGCACTACTTGCGTGCCATACGGGGGTTGCATGATGAAATTGCC
AACGGACGTGTCCAGGAGAAGAGGGGCATGCAGAGCCTGCTAATGGCTCTCGGCTTCCTCTGCCAATACGAGGTT
CTCTCCATTGCGCCGTCATCCACGTTCGCCATGCATCTCCACGCCATGCGATACATCTTCGCCCGCGTCTGCGAA
GGGCGGCTGGACGTGACTGACGAAGCCCTGTGTTTCGCCTACGAGGGCTATTGCTTCCTGGCCCTAAGCAACACT
ATTACTCCCTCGATACAGCCGGGCGAGGTGCTCTACGACCTGGACATCGAGCGGCTGCACGGGTTCAGAAAGTCG
CCGACCTTTGGAGCGATCTTTGCCGGTAGCCACGACCTGTTTACCCTGATTCCCCGAGCGCAACAGCTGTACCGC
CGGCGCCTCACCGAGGAGGCCGGCGGAACAGCCGGACTCAATTAG
Transcript >Hirsu2|5173
ATGGCCGACTGCCGTGAGGATCGGTCCTCGCGGAAGCCGAACGCGGCCCGCTTCCCGACCAAGTTTCGGCTTCGG
CATGCCCGCTCAAAGACGGGCTGCCTCACATGCCGCCAACGCAAGAAAAAGTGCGACGAGACAAGGCCCAGTTGT
GCCTCGTGCACTCGCAGTGCCCTGGACTGCGTCTGGCCGGAAAGGCCTGACGCCCCGAAGCCACGCTACGAGCAT
TATCTGGGTGAGCTGGCGGTGCTGCTGCAGGCCAGAACTTCCGCGCGGAATCCCTTCGTTACCTGCGTGCTTCCG
CTGGCCCAAACCGACGACCTGCTCATGCACGCCGTCCTGGCCGTCAGCGGGACTCATCTGGCACACAAGCTCCAG
GACGCCGCTCATACCGAGCTAGCCACCCGTCGGCACTACTTGCGTGCCATACGGGGGTTGCATGATGAAATTGCC
AACGGACGTGTCCAGGAGAAGAGGGGCATGCAGAGCCTGCTAATGGCTCTCGGCTTCCTCTGCCAATACGAGGTT
CTCTCCATTGCGCCGTCATCCACGTTCGCCATGCATCTCCACGCCATGCGATACATCTTCGCCCGCGTCTGCGAA
GGGCGGCTGGACGTGACTGACGAAGCCCTGTGTTTCGCCTACGAGGGCTATTGCTTCCTGGCCCTAAGCAACACT
ATTACTCCCTCGATACAGCCGGGCGAGGTGCTCTACGACCTGGACATCGAGCGGCTGCACGGGTTCAGAAAGTCG
CCGACCTTTGGAGCGATCTTTGCCGGTAGCCACGACCTGTTTACCCTGATTCCCCGAGCGCAACAGCTGTACCGC
CGGCGCCTCACCGAGGAGGCCGGCGGAACAGCCGGACTCAATTAG
Gene >Hirsu2|5173
ATGGCCGACTGCCGTGAGGATCGGTCCTCGCGGAAGCCGAACGCGGCCCGCTTCCCGACCAAGTTTCGGCTTCGG
CATGCCCGCTCAAAGACGGGCTGCCTCACATGCCGCCAACGCAAGAAAAAGTGCGACGAGACAAGGCCCAGTTGT
GCCTCGTGCACTCGCAGTGCCCTGGACTGCGTCTGGCCGGAAAGGCCTGACGCCCCGAAGCCACGCTACGAGGTG
GGCGCCATTGTCCTGCCGTCGCCCCGGCGATGCGTAACAGTGTCCGGCTCCAGCCGCGCCTGTTTCCTGGCCGCT
GAGTCCCCCCGTCTCCTCCAGCATTATCTGGGTGAGCTGGCGGTGCTGCTGCAGGCCAGAACTTCCGCGCGGAAT
CCCTTCGTTACCTGCGTGCTTCCGCTGGCCCAAACCGACGACCTGCTCATGCACGCCGTCCTGGCCGTCAGCGGG
ACTCATCTGGCACACAAGCTCCAGGACGCCGCTCATACCGAGCTAGCCACCCGTCGGCACTACTTGCGTGCCATA
CGGGGGTTGCATGATGAAATTGCCAACGGACGTGTCCAGGAGAAGAGGGGCATGCAGAGCCTGCTAATGGCTCTC
GGCTTCCTCTGCCAATACGAGGTGGGTTTCGCGATAGTCGAATGTGCGATATTGAAATTCAGGTGACCCGTTGAC
ATCAGTGGCAATGTTCACAGGTTCTCTCCATTGCGCCGTCATCCACGTTCGCCATGCATCTCCACGCCATGCGAT
ACATCTTCGCCCGCGTCTGCGAAGGGCGGCTGGACGTGACTGACGAAGCCCTGTGTTTCGCCTACGAGGGCTATT
GCTTCCTGGCCCTAAGCAACACTATTACTCCCTCGATACAGCCGGGCGAGGTGCTCTACGACCTGGACATCGAGC
GGCTGCACGGGTTCAGAAAGTCGCCGACCTTTGGAGCGATCTTTGCCGGTAGCCACGACCTGTTTACCCTGATTC
CCCGAGCGCAACAGCTGTACCGCCGGCGCCTCACCGAGGAGGCCGGCGGAACAGCCGGTCCGTCGCAAGAGGTCT
TAGCTTCCTACGACGAACTGAGCGGCCGCATTGAGTCCTGGAGGATGGAACCGGTACCAGCCGCCGAGCAGGACT
CAATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail