Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5169
Gene name
LocationContig_259:17491..18091
Strand+
Gene length (bp)600
Transcript length (bp)366
Coding sequence length (bp)366
Protein length (aa) 122

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.2333 0.0617 0.9246 0.1107 0.0797 0.0591 0.1203 0.1885 0.1195 0.0197

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4906
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-rufipedis Ophun1|69
Ophiocordyceps kimflemingae Ophio5|4627
Ophiocordyceps subramaniannii Hirsu2|1417
Ophiocordyceps subramaniannii Hirsu2|4462
Ophiocordyceps subramaniannii Hirsu2|5169 (this protein)
Ophiocordyceps subramaniannii Hirsu2|5170

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5169
MKPTFAPLVSVLIAVEYADFADFVNSEARHTCPKNNGQTFISTYIVKTSMVALRKTGPLFDLAGLSTWFFVEAVQ
ETDPADQSPSVKPQPTDGPQKPLGGGDAGSQAAYSCPVDEKKTYTT*
Coding >Hirsu2|5169
ATGAAGCCTACGTTTGCCCCTCTTGTCTCCGTGCTCATAGCGGTGGAGTACGCCGACTTCGCCGACTTCGTTAAT
TCCGAAGCCAGACATACCTGCCCAAAGAATAACGGGCAGACCTTCATCTCTACCTACATTGTCAAGACGAGTATG
GTTGCCCTGAGGAAGACTGGTCCTCTTTTCGATCTCGCGGGTCTCTCAACTTGGTTCTTCGTTGAGGCGGTACAA
GAGACTGATCCTGCCGACCAGTCCCCTTCGGTGAAGCCACAGCCAACAGACGGCCCGCAGAAGCCGCTCGGCGGT
GGGGATGCGGGCAGTCAGGCTGCCTACAGTTGCCCGGTGGACGAGAAGAAGACATATACAACGTAG
Transcript >Hirsu2|5169
ATGAAGCCTACGTTTGCCCCTCTTGTCTCCGTGCTCATAGCGGTGGAGTACGCCGACTTCGCCGACTTCGTTAAT
TCCGAAGCCAGACATACCTGCCCAAAGAATAACGGGCAGACCTTCATCTCTACCTACATTGTCAAGACGAGTATG
GTTGCCCTGAGGAAGACTGGTCCTCTTTTCGATCTCGCGGGTCTCTCAACTTGGTTCTTCGTTGAGGCGGTACAA
GAGACTGATCCTGCCGACCAGTCCCCTTCGGTGAAGCCACAGCCAACAGACGGCCCGCAGAAGCCGCTCGGCGGT
GGGGATGCGGGCAGTCAGGCTGCCTACAGTTGCCCGGTGGACGAGAAGAAGACATATACAACGTAG
Gene >Hirsu2|5169
ATGAAGCCTACGTTTGCCCCTCTTGTCTCCGTGCTCATAGCGGTGGAGTACGCCGACTTCGCCGACTTCGTTAAT
TCCGAAGCCAGACATACCTGCCCAAAGAATAACGGGCAGACCTTCATCTCGTAAGTAATCTGCTGTTCACGTTGC
TTAATTTCATATTGGCTTTATGTTGTCTTTGCACATATCATGGCTTGGGAGGATGGACTAGCTAACGCAATCTTG
CCGTGATAGAGGCGGGAAGAAGTATGAGTTGAATGCGACCAAGGCGTCCGAGGGATTCCAGTAGTAGAGAAAGAT
TGCGGCAGCGTGACAGCATGCGCGGAGAGGTGTGCGGCGAACAAAGACTGTCTTCACAGTACCTACATTGTCAAG
ACGAGTATGGTTGCCCTGAGGAAGACTGGTCCTCTTTTCGATCTCGCGGGTCTCTCAACTTGGTTCTTCGTTGAG
GCGGTACAAGAGACTGATCCTGCCGACCAGTCCCCTTCGGTGAAGCCACAGCCAACAGACGGCCCGCAGAAGCCG
CTCGGCGGTGGGGATGCGGGCAGTCAGGCTGCCTACAGTTGCCCGGTGGACGAGAAGAAGACATATACAACGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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