Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5164
Gene name
LocationContig_2589:1680..2193
Strand+
Gene length (bp)513
Transcript length (bp)402
Coding sequence length (bp)402
Protein length (aa) 134

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1285 0.0456 0.9392 0.1503 0.2632 0.0342 0.2603 0.5298 0.0979 0.0517

SignalP

SignalP signal predicted Location Score
Yes 1 - 17 0.999407

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup98
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3581
Ophiocordyceps australis map64 (Brazil) OphauB2|324
Ophiocordyceps camponoti-floridani Ophcf2|01007
Ophiocordyceps camponoti-rufipedis Ophun1|7143
Ophiocordyceps kimflemingae Ophio5|7930
Ophiocordyceps subramaniannii Hirsu2|156
Ophiocordyceps subramaniannii Hirsu2|2137
Ophiocordyceps subramaniannii Hirsu2|3139
Ophiocordyceps subramaniannii Hirsu2|3419
Ophiocordyceps subramaniannii Hirsu2|5164 (this protein)
Ophiocordyceps subramaniannii Hirsu2|7455
Ophiocordyceps subramaniannii Hirsu2|9490

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5164
MRWQLLCVPSAASAALASVCPGVGPGCRVGAGDQNVTSFQLYPENAEWDPKRCRMYFSAVYNSTVVVWDPVRRLQ
TGLLSIPGLSYQPPGHASGVRLDDSGDNLFIMNNAGAAFSTDGADIAGDNNLVNTSST*
Coding >Hirsu2|5164
ATGCGGTGGCAGCTTTTATGCGTGCCCTCGGCGGCCTCGGCCGCGCTGGCCTCGGTCTGTCCGGGCGTCGGCCCC
GGCTGCCGCGTCGGGGCGGGCGACCAGAACGTCACGTCGTTCCAGCTGTACCCCGAGAACGCGGAGTGGGATCCG
AAGCGATGTCGCATGTACTTCAGCGCAGTCTACAACTCGACCGTCGTCGTCTGGGATCCGGTCCGCAGGCTCCAG
ACGGGCCTCCTCAGCATCCCGGGCCTCAGCTACCAGCCGCCCGGGCACGCGAGCGGCGTCCGGCTCGACGACAGC
GGCGACAACCTGTTCATCATGAACAACGCCGGCGCGGCCTTTAGCACCGACGGCGCCGACATCGCGGGCGACAAC
AACCTGGTCAATACGTCGTCAACCTGA
Transcript >Hirsu2|5164
ATGCGGTGGCAGCTTTTATGCGTGCCCTCGGCGGCCTCGGCCGCGCTGGCCTCGGTCTGTCCGGGCGTCGGCCCC
GGCTGCCGCGTCGGGGCGGGCGACCAGAACGTCACGTCGTTCCAGCTGTACCCCGAGAACGCGGAGTGGGATCCG
AAGCGATGTCGCATGTACTTCAGCGCAGTCTACAACTCGACCGTCGTCGTCTGGGATCCGGTCCGCAGGCTCCAG
ACGGGCCTCCTCAGCATCCCGGGCCTCAGCTACCAGCCGCCCGGGCACGCGAGCGGCGTCCGGCTCGACGACAGC
GGCGACAACCTGTTCATCATGAACAACGCCGGCGCGGCCTTTAGCACCGACGGCGCCGACATCGCGGGCGACAAC
AACCTGGTCAATACGTCGTCAACCTGA
Gene >Hirsu2|5164
ATGCGGTGGCAGCTTTTATGCGTGCCCTCGGCGGCCTCGGCCGCGCTGGCCTCGGTCTGTCCGGGCGTCGGCCCC
GGCTGCCGCGTCGGGGCGGGCGACCAGAACGTCACGTCGTTCCAGCTGTACCCCGAGAACGCGGAGTGGGATCCG
AAGCGATGTCGCATGTACTTCAGGTGAGGCAGCGTCTCAGATCGCCCCGGAAGCGCTCGCGTGACGGCGCTCGAA
ATCCTAACACCCGTCGCAGCGCAGTCTACAACTCGACCGTCGTCGTCTGGGATCCGGTCCGCAGGCTCCAGACGG
GCCTCCTCAGCATCCCGGGCCTCAGCTACCAGCCGCCCGGGCACGCGAGCGGCGTCCGGCTCGACGACAGCGGCG
ACAACCTGTTCATCATGAACAACGCCGGCGCGGCCTTTAGCACCGACGGCGCCGACATCGCGGGCGACAACAACC
TGGTCAAGTGGGACCTGACCGAGGCCGAGCCGGCCAGGGCGGTCCAGTACGTCGTCAACCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail