© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|5138 |
| Gene name | |
| Location | Contig_2572:330..2167 |
| Strand | - |
| Gene length (bp) | 1837 |
| Transcript length (bp) | 1419 |
| Coding sequence length (bp) | 1419 |
| Protein length (aa) | 473 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03169 | OPT | OPT oligopeptide transporter protein | 4.3E-81 | 1 | 424 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q06593|OPT2_YEAST | Oligopeptide transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OPT2 PE=1 SV=1 | 4 | 445 | 2.0E-63 |
| sp|P40900|ISP4_SCHPO | Sexual differentiation process protein isp4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=isp4 PE=2 SV=2 | 10 | 462 | 1.0E-55 |
| sp|O14031|PGT1_SCHPO | Glutathione transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pgt1 PE=1 SV=1 | 5 | 460 | 5.0E-52 |
| sp|O23482|OPT3_ARATH | Oligopeptide transporter 3 OS=Arabidopsis thaliana GN=OPT3 PE=2 SV=3 | 5 | 449 | 5.0E-48 |
| sp|Q9SUA4|OPT5_ARATH | Oligopeptide transporter 5 OS=Arabidopsis thaliana GN=OPT5 PE=2 SV=1 | 4 | 449 | 6.0E-46 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q06593|OPT2_YEAST | Oligopeptide transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OPT2 PE=1 SV=1 | 4 | 445 | 2.0E-63 |
| sp|P40900|ISP4_SCHPO | Sexual differentiation process protein isp4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=isp4 PE=2 SV=2 | 10 | 462 | 1.0E-55 |
| sp|O14031|PGT1_SCHPO | Glutathione transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pgt1 PE=1 SV=1 | 5 | 460 | 5.0E-52 |
| sp|O23482|OPT3_ARATH | Oligopeptide transporter 3 OS=Arabidopsis thaliana GN=OPT3 PE=2 SV=3 | 5 | 449 | 5.0E-48 |
| sp|Q9SUA4|OPT5_ARATH | Oligopeptide transporter 5 OS=Arabidopsis thaliana GN=OPT5 PE=2 SV=1 | 4 | 449 | 6.0E-46 |
| sp|Q9FME8|OPT4_ARATH | Oligopeptide transporter 4 OS=Arabidopsis thaliana GN=OPT4 PE=1 SV=1 | 5 | 449 | 2.0E-45 |
| sp|Q9FG72|OPT1_ARATH | Oligopeptide transporter 1 OS=Arabidopsis thaliana GN=OPT1 PE=2 SV=1 | 4 | 451 | 7.0E-45 |
| sp|P40897|OPT1_YEAST | Oligopeptide transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OPT1 PE=1 SV=1 | 3 | 464 | 1.0E-44 |
| sp|O04514|OPT2_ARATH | Oligopeptide transporter 2 OS=Arabidopsis thaliana GN=OPT2 PE=2 SV=2 | 5 | 449 | 1.0E-43 |
| sp|O82485|OPT7_ARATH | Oligopeptide transporter 7 OS=Arabidopsis thaliana GN=OPT7 PE=2 SV=1 | 5 | 449 | 1.0E-40 |
| sp|Q9FJD1|OPT8_ARATH | Oligopeptide transporter 8 OS=Arabidopsis thaliana GN=OPT8 PE=2 SV=1 | 5 | 449 | 2.0E-36 |
| sp|Q7LL00|YQJC_SCHPO | Uncharacterized oligopeptide transporter C1840.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1840.12 PE=3 SV=2 | 15 | 449 | 5.0E-35 |
| sp|Q9T095|OPT6_ARATH | Oligopeptide transporter 6 OS=Arabidopsis thaliana GN=OPT6 PE=2 SV=1 | 5 | 449 | 1.0E-34 |
| sp|Q9FJD2|OPT9_ARATH | Oligopeptide transporter 9 OS=Arabidopsis thaliana GN=OPT9 PE=2 SV=1 | 1 | 449 | 2.0E-31 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0035673 | oligopeptide transmembrane transporter activity | Yes |
| GO:0042887 | amide transmembrane transporter activity | No |
| GO:1904680 | peptide transmembrane transporter activity | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cell membrane | Transmembrane domain | 0.0459 | 0.1162 | 0.113 | 0.5773 | 0.2051 | 0.0435 | 0.3036 | 0.3498 | 0.1481 | 0.0012 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 5 | 27 | 22 |
| 2 | 70 | 92 | 22 |
| 3 | 150 | 172 | 22 |
| 4 | 177 | 199 | 22 |
| 5 | 220 | 242 | 22 |
| 6 | 262 | 284 | 22 |
| 7 | 322 | 344 | 22 |
| 8 | 369 | 391 | 22 |
| 9 | 404 | 426 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 15 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|5138 MSAGLLVSIIISLAIWYSNSWNTGYLPINTNQVFDHFGQPYNISNVLDERGSFDERKYASYSAPYIGSMFTVLYG AYFSMYAGFATYAVLHIRREIKLGLRNLLRCFTFPWRKLRKARGKGGAGKPRPEEQQHTDVHNRLMAAYPEVSEW WYLGVLVVSLIFGVLGLTLYPTFTSPLVVFYGIALALIVIIPNGIIASSTGIEIPQDILAGILGSIIARGNPLSI LYFRSYGFITLAHATAFAKDLKLAHYVKIPPRVTFVGQMVSTFISTLICACVMMYQVGIPDVCTPNAPNRYFCPG VKVGATDIILSGTVGSLRIFGVQYPWLLMGFLYGAVVVVGLWGLKRWWPGSRALRQVHSMVFLVGSIQLIPYNFA YSLPTVPVAWFSWIYIRGRYPGFWSKYNFVLSSALSAGIAISALAMAFTVQWADVKLDWWGNTQQAQGCEKDPCL LRTLGPGERFFPWWDGSKSPAP* |
| Coding | >Hirsu2|5138 ATGTCGGCGGGCCTTTTGGTCTCCATCATCATCAGCCTCGCCATCTGGTACTCCAACAGCTGGAACACGGGCTAC CTGCCCATCAACACCAACCAGGTCTTCGACCACTTCGGGCAGCCGTACAACATCAGCAACGTGCTGGACGAGCGC GGCTCGTTCGACGAGCGCAAGTACGCCAGCTACTCGGCCCCCTACATCGGCTCCATGTTCACCGTCCTCTACGGC GCCTACTTCTCCATGTACGCCGGCTTCGCCACCTACGCCGTCCTGCACATCCGGCGCGAGATCAAGCTCGGCCTG CGCAACCTGCTCCGCTGCTTCACCTTCCCGTGGCGCAAGCTCCGGAAGGCGAGGGGTAAGGGCGGCGCCGGCAAG CCGAGGCCGGAGGAGCAGCAGCACACGGACGTGCATAACCGCCTGATGGCGGCGTATCCCGAAGTCTCCGAGTGG TGGTACCTGGGCGTGCTCGTCGTCTCCCTCATCTTCGGCGTGCTCGGCCTCACCCTGTACCCGACCTTCACGTCG CCGCTCGTCGTCTTTTACGGCATCGCGCTCGCCCTCATCGTCATCATCCCGAACGGCATCATCGCGTCGTCGACT GGCATCGAGATCCCGCAGGACATTCTCGCCGGCATCCTGGGGAGCATCATCGCCAGGGGCAACCCGCTGTCCATA CTCTACTTTCGGTCATACGGCTTCATCACCCTGGCGCACGCCACCGCCTTCGCCAAGGACCTCAAGCTCGCGCAC TACGTCAAGATCCCGCCGCGGGTCACGTTCGTCGGCCAGATGGTGTCGACGTTCATCTCGACGCTCATCTGCGCG TGCGTCATGATGTACCAGGTGGGCATCCCGGACGTGTGCACGCCCAACGCGCCCAACCGCTACTTCTGCCCGGGC GTCAAGGTGGGCGCCACGGACATCATCCTGTCCGGCACCGTCGGCTCGCTCAGGATCTTCGGCGTGCAGTACCCG TGGCTGCTGATGGGCTTCCTCTACGGCGCCGTCGTCGTCGTCGGCCTCTGGGGCCTGAAGCGCTGGTGGCCCGGC TCGCGGGCCCTGCGCCAGGTGCACTCCATGGTCTTCCTCGTCGGCTCCATCCAGCTGATCCCGTACAACTTCGCG TACTCGCTACCCACGGTGCCCGTCGCCTGGTTCTCGTGGATCTACATCCGCGGGCGCTACCCGGGCTTCTGGTCC AAGTACAACTTCGTCCTGTCGTCGGCGCTGTCGGCCGGCATCGCCATCTCGGCCCTGGCCATGGCCTTCACCGTC CAGTGGGCCGACGTCAAGCTCGACTGGTGGGGCAACACGCAGCAGGCGCAGGGCTGCGAGAAGGACCCGTGCCTG CTGCGGACCCTCGGCCCGGGCGAGCGCTTCTTCCCCTGGTGGGACGGCAGCAAGAGCCCGGCGCCGTGA |
| Transcript | >Hirsu2|5138 ATGTCGGCGGGCCTTTTGGTCTCCATCATCATCAGCCTCGCCATCTGGTACTCCAACAGCTGGAACACGGGCTAC CTGCCCATCAACACCAACCAGGTCTTCGACCACTTCGGGCAGCCGTACAACATCAGCAACGTGCTGGACGAGCGC GGCTCGTTCGACGAGCGCAAGTACGCCAGCTACTCGGCCCCCTACATCGGCTCCATGTTCACCGTCCTCTACGGC GCCTACTTCTCCATGTACGCCGGCTTCGCCACCTACGCCGTCCTGCACATCCGGCGCGAGATCAAGCTCGGCCTG CGCAACCTGCTCCGCTGCTTCACCTTCCCGTGGCGCAAGCTCCGGAAGGCGAGGGGTAAGGGCGGCGCCGGCAAG CCGAGGCCGGAGGAGCAGCAGCACACGGACGTGCATAACCGCCTGATGGCGGCGTATCCCGAAGTCTCCGAGTGG TGGTACCTGGGCGTGCTCGTCGTCTCCCTCATCTTCGGCGTGCTCGGCCTCACCCTGTACCCGACCTTCACGTCG CCGCTCGTCGTCTTTTACGGCATCGCGCTCGCCCTCATCGTCATCATCCCGAACGGCATCATCGCGTCGTCGACT GGCATCGAGATCCCGCAGGACATTCTCGCCGGCATCCTGGGGAGCATCATCGCCAGGGGCAACCCGCTGTCCATA CTCTACTTTCGGTCATACGGCTTCATCACCCTGGCGCACGCCACCGCCTTCGCCAAGGACCTCAAGCTCGCGCAC TACGTCAAGATCCCGCCGCGGGTCACGTTCGTCGGCCAGATGGTGTCGACGTTCATCTCGACGCTCATCTGCGCG TGCGTCATGATGTACCAGGTGGGCATCCCGGACGTGTGCACGCCCAACGCGCCCAACCGCTACTTCTGCCCGGGC GTCAAGGTGGGCGCCACGGACATCATCCTGTCCGGCACCGTCGGCTCGCTCAGGATCTTCGGCGTGCAGTACCCG TGGCTGCTGATGGGCTTCCTCTACGGCGCCGTCGTCGTCGTCGGCCTCTGGGGCCTGAAGCGCTGGTGGCCCGGC TCGCGGGCCCTGCGCCAGGTGCACTCCATGGTCTTCCTCGTCGGCTCCATCCAGCTGATCCCGTACAACTTCGCG TACTCGCTACCCACGGTGCCCGTCGCCTGGTTCTCGTGGATCTACATCCGCGGGCGCTACCCGGGCTTCTGGTCC AAGTACAACTTCGTCCTGTCGTCGGCGCTGTCGGCCGGCATCGCCATCTCGGCCCTGGCCATGGCCTTCACCGTC CAGTGGGCCGACGTCAAGCTCGACTGGTGGGGCAACACGCAGCAGGCGCAGGGCTGCGAGAAGGACCCGTGCCTG CTGCGGACCCTCGGCCCGGGCGAGCGCTTCTTCCCCTGGTGGGACGGCAGCAAGAGCCCGGCGCCGTGA |
| Gene | >Hirsu2|5138 ATGTCGGCGGGCCTTTTGGTCTCCATCATCATCAGCCTCGCCATCTGGTACTCCAACAGCTGGAACACGGGCTAC CTGCCCATCAACACCAACCAGGTCTTCGACCACTTCGGGCAGCCGTACAACATCAGCAACGTGCTGGACGAGCGC GGCTCGTTCGACGAGCGCAAGTACGCCAGCTACTCGGCCCCCTACATCGGCTCCATGTTCACCGTCCTCTACGGC GCCTACTTCTCCATGTACGCCGGCTTCGCCACCTACGCCGTCCTGCACATCCGGCGCGAGATCAAGCTCGGCCTG CGCAACCTGCTCCGCTGCTTCACCTTCCCGTGGCGCAAGCTCCGGAAGGCGAGGGGTAAGGGCGGCGCCGGCAAG CCGAGGCCGGAGGAGCAGCAGCACACGGACGTGCATAACCGCCTGATGGCGGCGTATCCCGAAGGTATCTCGTTA CCTTTTTCCCCCTCTGCTTGTCCGGATCGTTCCCTGACACCGCATCCCGCCCCTGCCAGTCTCCGAGTGGTGGTA CCTGGGCGTGCTCGTCGTCTCCCTCATCTTCGGCGTGCTCGGCCTCACCCTGTACCCGACCTTCACGTCGCCGCT CGTCGTCTTTTACGGCATCGCGCTCGCCCTCATCGTCATCATCCCGAACGGCATCATCGCGTCGTCGACTGGCAT CGAGATCCCGCAGGACATTCTCGCCGGCATCCTGGGGAGCATCATCGCCAGGGGCAACCCGCTGTCCATACTCTA CTTTCGGTCATACGGGTGCGTTGAATCTCTGAGCGATGACGGCTGCCGTGTTTCCCCTTCTTTTTTTTTTGCCCC CCCCAGACTTACGACCTCCACAGCTTCATCACCCTGGCGCACGCCACCGCCTTCGCCAAGGACCTCAAGCTCGCG CACTACGTCAAGGTGAGTTCCCCACGACGGCTTCCCGAACACAGGGCCTGACCGTCGCCCGCCCAGATCCCGCCG CGGGTCACGTTCGTCGGCCAGATGGTGTCGACGTTCATCTCGACGCTCATCTGCGCGTGCGTCATGATGTACCAG GTATGCATCTCTCTCTCTCTCTCTCCTCATGCCCGTCCCCATCCGCCATCACTCCCTGCTGACCTGCCTCCTCTC CGTCTAGGTGGGCATCCCGGACGTGTGCACGCCCAACGCGCCCAACCGCTACTTCTGCCCGGGCGTCAAGGTGGG CGCCACGGACATCATCCTGTCCGGCACCGTCGGCTCGCTCAGGATCTTCGGCGTGCAGTACCCGTGGCTGCTGAT GGGCTTCCTCTACGGCGCCGTCGTCGTCGTCGGCCTCTGGGGCCTGAAGCGCTGGTGGCCCGGCTCGCGGGCCCT GCGCCAGGTGCACTCCATGGTCTTCCTCGTCGGCTCCATCCAGCTGATCCCGTACAGTAAGGACCCTCCCCCTCC CCCTCTCTGTCTGTGTGTCAACTCTGACGACGCGCAGACTTCGCGTACTCGCTACCCACGGTGCCCGTCGCCTGG TTCTCGTGGATCTACATCCGCGGGCGCTACCCGGGCTTCTGGTCCAAGGTTCGCTCCCCCCCCCCTCGGGCGCCG CTTCCGCCGTCCGCACCCCGTCTGACCGTTCCGTCTCTCTCGCCAGTACAACTTCGTCCTGTCGTCGGCGCTGTC GGCCGGCATCGCCATCTCGGCCCTGGCCATGGCCTTCACCGTCCAGTGGGCCGACGTCAAGCTCGACTGGTGGGG CAACACGCAGCAGGCGCAGGGCTGCGAGAAGGACCCGTGCCTGCTGCGGACCCTCGGCCCGGGCGAGCGCTTCTT CCCCTGGTGGGACGGCAGCAAGAGCCCGGCGCCGTGA |