Protein ID | Hirsu2|5078 |
Gene name | |
Location | Contig_2544:225..1085 |
Strand | - |
Gene length (bp) | 860 |
Transcript length (bp) | 765 |
Coding sequence length (bp) | 765 |
Protein length (aa) | 255 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13668 | Ferritin_2 | Ferritin-like domain | 2.2E-28 | 100 | 225 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.0623 | 0.0379 | 0.9801 | 0.1276 | 0.0638 | 0.0094 | 0.0742 | 0.0834 | 0.1146 | 0.0017 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 17 | 0.993095 |
Orthofinder run ID | 4 |
Orthogroup | 385 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|5078 MVSLKTITTAAALASVACAFPSGVRLATRQAGEMTSEMASAGATAEGAQTTQSAESNAAARGSQAEAGKGAGAEA GAGAGAKAGAGAGAEGAASGQAAVDQKVVQFAGGLEHLETAFYRQCMQSDKLTASDKTAISQILDTEDKHTVKMQ LTAVALGSQPIKACKYKFPLEDRNSIMALALMLEETGQAAYLGAAPLISQDVALPLAGAILPIEAQHATVIRQLM SSGGEGGVGVESAGQRGAVPAVPRAFSTA* |
Coding | >Hirsu2|5078 ATGGTTTCACTCAAGACGATCACTACGGCTGCCGCCCTCGCCTCGGTTGCCTGTGCCTTCCCGTCCGGCGTCAGG CTGGCGACGCGGCAAGCCGGCGAGATGACGAGTGAGATGGCGAGCGCCGGCGCGACGGCCGAGGGCGCCCAGACG ACCCAGAGCGCCGAGAGCAACGCGGCCGCCAGGGGCTCCCAAGCCGAGGCCGGCAAGGGGGCTGGGGCCGAAGCC GGAGCCGGAGCCGGAGCCAAAGCCGGAGCTGGAGCCGGAGCTGAAGGCGCAGCGTCCGGACAAGCAGCGGTGGAC CAGAAAGTGGTGCAATTCGCGGGTGGGCTTGAGCACCTGGAGACGGCCTTCTACCGGCAGTGCATGCAGTCGGAC AAGTTGACGGCGTCGGACAAGACGGCCATCTCGCAGATCCTCGACACCGAGGACAAGCACACGGTCAAGATGCAG CTGACGGCGGTGGCGCTCGGCAGCCAGCCGATCAAGGCGTGCAAGTACAAGTTCCCGCTCGAGGACCGCAACTCC ATCATGGCCCTGGCGCTCATGCTGGAGGAGACGGGCCAGGCGGCGTACCTCGGGGCGGCGCCGCTCATCTCGCAA GACGTGGCGCTGCCCCTGGCCGGGGCGATCCTGCCGATCGAGGCGCAGCACGCGACGGTGATCCGGCAGCTGATG AGCTCGGGCGGCGAGGGCGGCGTGGGCGTGGAGAGCGCCGGGCAGCGCGGGGCGGTGCCGGCGGTGCCGCGGGCC TTCTCGACGGCCTGA |
Transcript | >Hirsu2|5078 ATGGTTTCACTCAAGACGATCACTACGGCTGCCGCCCTCGCCTCGGTTGCCTGTGCCTTCCCGTCCGGCGTCAGG CTGGCGACGCGGCAAGCCGGCGAGATGACGAGTGAGATGGCGAGCGCCGGCGCGACGGCCGAGGGCGCCCAGACG ACCCAGAGCGCCGAGAGCAACGCGGCCGCCAGGGGCTCCCAAGCCGAGGCCGGCAAGGGGGCTGGGGCCGAAGCC GGAGCCGGAGCCGGAGCCAAAGCCGGAGCTGGAGCCGGAGCTGAAGGCGCAGCGTCCGGACAAGCAGCGGTGGAC CAGAAAGTGGTGCAATTCGCGGGTGGGCTTGAGCACCTGGAGACGGCCTTCTACCGGCAGTGCATGCAGTCGGAC AAGTTGACGGCGTCGGACAAGACGGCCATCTCGCAGATCCTCGACACCGAGGACAAGCACACGGTCAAGATGCAG CTGACGGCGGTGGCGCTCGGCAGCCAGCCGATCAAGGCGTGCAAGTACAAGTTCCCGCTCGAGGACCGCAACTCC ATCATGGCCCTGGCGCTCATGCTGGAGGAGACGGGCCAGGCGGCGTACCTCGGGGCGGCGCCGCTCATCTCGCAA GACGTGGCGCTGCCCCTGGCCGGGGCGATCCTGCCGATCGAGGCGCAGCACGCGACGGTGATCCGGCAGCTGATG AGCTCGGGCGGCGAGGGCGGCGTGGGCGTGGAGAGCGCCGGGCAGCGCGGGGCGGTGCCGGCGGTGCCGCGGGCC TTCTCGACGGCCTGA |
Gene | >Hirsu2|5078 ATGGTTTCACTCAAGACGATCACTACGGCTGCCGCCCTCGCCTCGGTTGCCTGTGCCTTCCCGTCCGGCGTCAGG CTGGCGACGCGGCAAGCCGGCGAGATGACGAGTGAGATGGCGAGCGCCGGCGCGACGGCCGAGGGCGCCCAGACG ACCCAGAGCGCCGAGAGCAACGCGGCCGCCAGGGGCTCCCAAGCCGAGGCCGGCAAGGGGGCTGGGGCCGAAGCC GGAGCCGGAGCCGGAGCCAAAGCCGGAGCTGGAGCCGGAGCTGAAGGCGCAGCGTCCGGACAAGCAGCGGTGGAC CAGAAAGTGGTGCAATTGTACGTTGACCCCCACCAGTTCTGAGGTGGTTGCGCCCTTGGCTAACAGGACGGACAG CGCGGGTGGGCTTGAGCACCTGGAGACGGCCTTCTACCGGCAGTGCATGCAGTCGGACAAGTTGACGGCGTCGGA CAAGACGGCCATCTCGCAGATCCTCGACACCGAGGACAAGCACACGGTCAAGATGCAGCTGACGGCGGTGGCGCT CGGCAGCCAGCCGATCAAGGCGTGCAAGTACAAGTTCCCGCTCGAGGACCGCAACTCCATCATGGCCCTGGCGCT CATGCTGGAGGAGACGGGCCAGGCGGCGTACCTCGGGGCGGCGCCGCTCATCTCGCAAGACGTGGCGCTGCCCCT GGCCGGGGCGATCCTGCCGATCGAGGCGCAGCACGCGACGGTGATCCGGCAGCTGATGAGCTCGGGCGGCGAGGG CGGCGTGGGCGTGGAGAGCGCCGGGCAGCGCGGGGCGGTGCCGGCGGTGCCGCGGGCCTTCTCGACGTCCATGTC GGCGCGGGCCGTCAGCACGCTGGTCAAGGGCCTGA |