Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|5078
Gene name
Location	Contig_2544:225..1085
Strand	-
Gene length (bp)	860
Transcript length (bp)	765
Coding sequence length (bp)	765
Protein length (aa)	255

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13668	Ferritin_2	Ferritin-like domain	2.2E-28	100	225

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 20	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|5078 MVSLKTITTAAALASVACAFPSGVRLATRQAGEMTSEMASAGATAEGAQTTQSAESNAAARGSQAEAGKGAGAEA GAGAGAKAGAGAGAEGAASGQAAVDQKVVQFAGGLEHLETAFYRQCMQSDKLTASDKTAISQILDTEDKHTVKMQ LTAVALGSQPIKACKYKFPLEDRNSIMALALMLEETGQAAYLGAAPLISQDVALPLAGAILPIEAQHATVIRQLM SSGGEGGVGVESAGQRGAVPAVPRAFSTA*
Coding	>Hirsu2\|5078 ATGGTTTCACTCAAGACGATCACTACGGCTGCCGCCCTCGCCTCGGTTGCCTGTGCCTTCCCGTCCGGCGTCAGG CTGGCGACGCGGCAAGCCGGCGAGATGACGAGTGAGATGGCGAGCGCCGGCGCGACGGCCGAGGGCGCCCAGACG ACCCAGAGCGCCGAGAGCAACGCGGCCGCCAGGGGCTCCCAAGCCGAGGCCGGCAAGGGGGCTGGGGCCGAAGCC GGAGCCGGAGCCGGAGCCAAAGCCGGAGCTGGAGCCGGAGCTGAAGGCGCAGCGTCCGGACAAGCAGCGGTGGAC CAGAAAGTGGTGCAATTCGCGGGTGGGCTTGAGCACCTGGAGACGGCCTTCTACCGGCAGTGCATGCAGTCGGAC AAGTTGACGGCGTCGGACAAGACGGCCATCTCGCAGATCCTCGACACCGAGGACAAGCACACGGTCAAGATGCAG CTGACGGCGGTGGCGCTCGGCAGCCAGCCGATCAAGGCGTGCAAGTACAAGTTCCCGCTCGAGGACCGCAACTCC ATCATGGCCCTGGCGCTCATGCTGGAGGAGACGGGCCAGGCGGCGTACCTCGGGGCGGCGCCGCTCATCTCGCAA GACGTGGCGCTGCCCCTGGCCGGGGCGATCCTGCCGATCGAGGCGCAGCACGCGACGGTGATCCGGCAGCTGATG AGCTCGGGCGGCGAGGGCGGCGTGGGCGTGGAGAGCGCCGGGCAGCGCGGGGCGGTGCCGGCGGTGCCGCGGGCC TTCTCGACGGCCTGA
Transcript	>Hirsu2\|5078 ATGGTTTCACTCAAGACGATCACTACGGCTGCCGCCCTCGCCTCGGTTGCCTGTGCCTTCCCGTCCGGCGTCAGG CTGGCGACGCGGCAAGCCGGCGAGATGACGAGTGAGATGGCGAGCGCCGGCGCGACGGCCGAGGGCGCCCAGACG ACCCAGAGCGCCGAGAGCAACGCGGCCGCCAGGGGCTCCCAAGCCGAGGCCGGCAAGGGGGCTGGGGCCGAAGCC GGAGCCGGAGCCGGAGCCAAAGCCGGAGCTGGAGCCGGAGCTGAAGGCGCAGCGTCCGGACAAGCAGCGGTGGAC CAGAAAGTGGTGCAATTCGCGGGTGGGCTTGAGCACCTGGAGACGGCCTTCTACCGGCAGTGCATGCAGTCGGAC AAGTTGACGGCGTCGGACAAGACGGCCATCTCGCAGATCCTCGACACCGAGGACAAGCACACGGTCAAGATGCAG CTGACGGCGGTGGCGCTCGGCAGCCAGCCGATCAAGGCGTGCAAGTACAAGTTCCCGCTCGAGGACCGCAACTCC ATCATGGCCCTGGCGCTCATGCTGGAGGAGACGGGCCAGGCGGCGTACCTCGGGGCGGCGCCGCTCATCTCGCAA GACGTGGCGCTGCCCCTGGCCGGGGCGATCCTGCCGATCGAGGCGCAGCACGCGACGGTGATCCGGCAGCTGATG AGCTCGGGCGGCGAGGGCGGCGTGGGCGTGGAGAGCGCCGGGCAGCGCGGGGCGGTGCCGGCGGTGCCGCGGGCC TTCTCGACGGCCTGA
Gene	>Hirsu2\|5078 ATGGTTTCACTCAAGACGATCACTACGGCTGCCGCCCTCGCCTCGGTTGCCTGTGCCTTCCCGTCCGGCGTCAGG CTGGCGACGCGGCAAGCCGGCGAGATGACGAGTGAGATGGCGAGCGCCGGCGCGACGGCCGAGGGCGCCCAGACG ACCCAGAGCGCCGAGAGCAACGCGGCCGCCAGGGGCTCCCAAGCCGAGGCCGGCAAGGGGGCTGGGGCCGAAGCC GGAGCCGGAGCCGGAGCCAAAGCCGGAGCTGGAGCCGGAGCTGAAGGCGCAGCGTCCGGACAAGCAGCGGTGGAC CAGAAAGTGGTGCAATTGTACGTTGACCCCCACCAGTTCTGAGGTGGTTGCGCCCTTGGCTAACAGGACGGACAG CGCGGGTGGGCTTGAGCACCTGGAGACGGCCTTCTACCGGCAGTGCATGCAGTCGGACAAGTTGACGGCGTCGGA CAAGACGGCCATCTCGCAGATCCTCGACACCGAGGACAAGCACACGGTCAAGATGCAGCTGACGGCGGTGGCGCT CGGCAGCCAGCCGATCAAGGCGTGCAAGTACAAGTTCCCGCTCGAGGACCGCAACTCCATCATGGCCCTGGCGCT CATGCTGGAGGAGACGGGCCAGGCGGCGTACCTCGGGGCGGCGCCGCTCATCTCGCAAGACGTGGCGCTGCCCCT GGCCGGGGCGATCCTGCCGATCGAGGCGCAGCACGCGACGGTGATCCGGCAGCTGATGAGCTCGGGCGGCGAGGG CGGCGTGGGCGTGGAGAGCGCCGGGCAGCGCGGGGCGGTGCCGGCGGTGCCGCGGGCCTTCTCGACGTCCATGTC GGCGCGGGCCGTCAGCACGCTGGTCAAGGGCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail