Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5073
Gene name
LocationContig_254:25248..25806
Strand+
Gene length (bp)558
Transcript length (bp)558
Coding sequence length (bp)558
Protein length (aa) 186

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF16541 AltA1 Alternaria alternata allergen 1 1.7E-27 41 169

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 17 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5073
MRSFITALLLAGAALAAPANPETTKPQTCTSRSTKVRDWKVEDFDYHASYVFSTPAHQNSWGYVNFTLVNPVLHY
KTVCQAASSQLQDFFYGQVVYKCTTPNGYGDEATFTFSRPSGELKINQTWYCPNEGSHFEAHGGVHLDLKCNESK
WQNDHWKIGQIYSTRNIDCAHVDVQAKVTEMSGVA*
Coding >Hirsu2|5073
ATGCGTAGCTTCATCACCGCCCTCCTCCTCGCCGGCGCGGCCCTCGCCGCACCGGCCAACCCGGAGACGACCAAG
CCGCAGACGTGCACGTCCAGGTCGACCAAGGTCAGGGACTGGAAGGTCGAGGACTTCGACTACCACGCCTCGTAC
GTCTTCTCTACGCCAGCCCACCAGAACTCGTGGGGCTACGTCAACTTCACACTCGTGAACCCGGTGCTGCACTAC
AAGACGGTCTGCCAGGCCGCCTCGTCCCAGCTGCAAGACTTCTTCTACGGCCAGGTCGTCTACAAGTGCACCACG
CCCAACGGCTACGGCGACGAGGCCACCTTCACCTTCTCCCGGCCCTCGGGCGAGCTCAAGATCAACCAGACGTGG
TACTGCCCCAACGAGGGCAGCCACTTCGAGGCCCACGGCGGCGTCCACCTCGACCTCAAGTGCAACGAGTCCAAG
TGGCAGAACGACCACTGGAAGATCGGCCAGATCTACTCCACCCGCAACATCGACTGCGCCCACGTCGACGTCCAG
GCCAAGGTCACCGAGATGAGCGGCGTCGCCTGA
Transcript >Hirsu2|5073
ATGCGTAGCTTCATCACCGCCCTCCTCCTCGCCGGCGCGGCCCTCGCCGCACCGGCCAACCCGGAGACGACCAAG
CCGCAGACGTGCACGTCCAGGTCGACCAAGGTCAGGGACTGGAAGGTCGAGGACTTCGACTACCACGCCTCGTAC
GTCTTCTCTACGCCAGCCCACCAGAACTCGTGGGGCTACGTCAACTTCACACTCGTGAACCCGGTGCTGCACTAC
AAGACGGTCTGCCAGGCCGCCTCGTCCCAGCTGCAAGACTTCTTCTACGGCCAGGTCGTCTACAAGTGCACCACG
CCCAACGGCTACGGCGACGAGGCCACCTTCACCTTCTCCCGGCCCTCGGGCGAGCTCAAGATCAACCAGACGTGG
TACTGCCCCAACGAGGGCAGCCACTTCGAGGCCCACGGCGGCGTCCACCTCGACCTCAAGTGCAACGAGTCCAAG
TGGCAGAACGACCACTGGAAGATCGGCCAGATCTACTCCACCCGCAACATCGACTGCGCCCACGTCGACGTCCAG
GCCAAGGTCACCGAGATGAGCGGCGTCGCCTGA
Gene >Hirsu2|5073
ATGCGTAGCTTCATCACCGCCCTCCTCCTCGCCGGCGCGGCCCTCGCCGCACCGGCCAACCCGGAGACGACCAAG
CCGCAGACGTGCACGTCCAGGTCGACCAAGGTCAGGGACTGGAAGGTCGAGGACTTCGACTACCACGCCTCGTAC
GTCTTCTCTACGCCAGCCCACCAGAACTCGTGGGGCTACGTCAACTTCACACTCGTGAACCCGGTGCTGCACTAC
AAGACGGTCTGCCAGGCCGCCTCGTCCCAGCTGCAAGACTTCTTCTACGGCCAGGTCGTCTACAAGTGCACCACG
CCCAACGGCTACGGCGACGAGGCCACCTTCACCTTCTCCCGGCCCTCGGGCGAGCTCAAGATCAACCAGACGTGG
TACTGCCCCAACGAGGGCAGCCACTTCGAGGCCCACGGCGGCGTCCACCTCGACCTCAAGTGCAACGAGTCCAAG
TGGCAGAACGACCACTGGAAGATCGGCCAGATCTACTCCACCCGCAACATCGACTGCGCCCACGTCGACGTCCAG
GCCAAGGTCACCGAGATGAGCGGCGTCGCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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