© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|5032 |
| Gene name | |
| Location | Contig_252:23628..24353 |
| Strand | - |
| Gene length (bp) | 725 |
| Transcript length (bp) | 537 |
| Coding sequence length (bp) | 537 |
| Protein length (aa) | 179 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00076 | RRM_1 | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 1.9E-15 | 51 | 120 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|B5G279|NCBP2_TAEGU | Nuclear cap-binding protein subunit 2 OS=Taeniopygia guttata GN=NCBP2 PE=2 SV=1 | 42 | 166 | 4.0E-61 |
| sp|B7P877|NCBP2_IXOSC | Nuclear cap-binding protein subunit 2 OS=Ixodes scapularis GN=Cbp20 PE=3 SV=1 | 42 | 162 | 1.0E-60 |
| sp|Q5ZKR5|NCBP2_CHICK | Nuclear cap-binding protein subunit 2 OS=Gallus gallus GN=NCBP2 PE=2 SV=1 | 42 | 166 | 2.0E-60 |
| sp|P52299|NCBP2_XENLA | Nuclear cap-binding protein subunit 2 OS=Xenopus laevis GN=ncbp2 PE=2 SV=2 | 42 | 164 | 4.0E-60 |
| sp|B1WC40|NCBP2_RAT | Nuclear cap-binding protein subunit 2 OS=Rattus norvegicus GN=Ncbp2 PE=1 SV=1 | 39 | 165 | 7.0E-60 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|B5G279|NCBP2_TAEGU | Nuclear cap-binding protein subunit 2 OS=Taeniopygia guttata GN=NCBP2 PE=2 SV=1 | 42 | 166 | 4.0E-61 |
| sp|B7P877|NCBP2_IXOSC | Nuclear cap-binding protein subunit 2 OS=Ixodes scapularis GN=Cbp20 PE=3 SV=1 | 42 | 162 | 1.0E-60 |
| sp|Q5ZKR5|NCBP2_CHICK | Nuclear cap-binding protein subunit 2 OS=Gallus gallus GN=NCBP2 PE=2 SV=1 | 42 | 166 | 2.0E-60 |
| sp|P52299|NCBP2_XENLA | Nuclear cap-binding protein subunit 2 OS=Xenopus laevis GN=ncbp2 PE=2 SV=2 | 42 | 164 | 4.0E-60 |
| sp|B1WC40|NCBP2_RAT | Nuclear cap-binding protein subunit 2 OS=Rattus norvegicus GN=Ncbp2 PE=1 SV=1 | 39 | 165 | 7.0E-60 |
| sp|Q9CQ49|NCBP2_MOUSE | Nuclear cap-binding protein subunit 2 OS=Mus musculus GN=Ncbp2 PE=1 SV=1 | 39 | 165 | 7.0E-60 |
| sp|P52298|NCBP2_HUMAN | Nuclear cap-binding protein subunit 2 OS=Homo sapiens GN=NCBP2 PE=1 SV=1 | 39 | 165 | 1.0E-59 |
| sp|Q3ZBJ1|NCBP2_BOVIN | Nuclear cap-binding protein subunit 2 OS=Bos taurus GN=NCBP2 PE=2 SV=1 | 39 | 165 | 1.0E-59 |
| sp|Q6DES0|NCBP2_XENTR | Nuclear cap-binding protein subunit 2 OS=Xenopus tropicalis GN=ncbp2 PE=2 SV=1 | 42 | 164 | 2.0E-59 |
| sp|Q8JGR6|NCBP2_DANRE | Nuclear cap-binding protein subunit 2 OS=Danio rerio GN=ncbp2 PE=2 SV=2 | 42 | 163 | 3.0E-59 |
| sp|Q177H0|NCBP2_AEDAE | Nuclear cap-binding protein subunit 2 OS=Aedes aegypti GN=Cbp20 PE=3 SV=1 | 42 | 167 | 5.0E-59 |
| sp|Q54KR9|NCBP2_DICDI | Nuclear cap-binding protein subunit 2 OS=Dictyostelium discoideum GN=ncbp2 PE=3 SV=1 | 45 | 165 | 5.0E-59 |
| sp|Q7QCB6|NCBP2_ANOGA | Nuclear cap-binding protein subunit 2 OS=Anopheles gambiae GN=Cbp20 PE=3 SV=3 | 42 | 167 | 5.0E-59 |
| sp|C0H859|NCBP2_SALSA | Nuclear cap-binding protein subunit 2 OS=Salmo salar GN=ncbp2 PE=2 SV=1 | 42 | 162 | 1.0E-58 |
| sp|Q9P383|NCBP2_SCHPO | Nuclear cap-binding protein subunit 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cbc2 PE=3 SV=1 | 7 | 171 | 2.0E-58 |
| sp|B0W939|NCBP2_CULQU | Nuclear cap-binding protein subunit 2 OS=Culex quinquefasciatus GN=Cbp20 PE=3 SV=1 | 42 | 167 | 4.0E-58 |
| sp|C1BY64|NCBP2_ESOLU | Nuclear cap-binding protein subunit 2 OS=Esox lucius GN=ncbp2 PE=2 SV=1 | 42 | 162 | 6.0E-58 |
| sp|B4LZ88|NCB2B_DROVI | Nuclear cap-binding protein subunit 2B OS=Drosophila virilis GN=Cbp20-B PE=3 SV=1 | 42 | 165 | 1.0E-56 |
| sp|B3LYP1|NCBP2_DROAN | Nuclear cap-binding protein subunit 2 OS=Drosophila ananassae GN=Cbp20 PE=3 SV=1 | 42 | 165 | 1.0E-56 |
| sp|B4JUT1|NCBP2_DROGR | Nuclear cap-binding protein subunit 2 OS=Drosophila grimshawi GN=Cbp20 PE=3 SV=1 | 42 | 165 | 1.0E-56 |
| sp|A2SW84|NCBP2_SINCH | Nuclear cap-binding protein subunit 2 OS=Siniperca chuatsi GN=ncbp2 PE=2 SV=1 | 42 | 166 | 2.0E-56 |
| sp|B4KCD5|NCBP2_DROMO | Nuclear cap-binding protein subunit 2 OS=Drosophila mojavensis GN=Cbp20 PE=3 SV=1 | 42 | 165 | 2.0E-56 |
| sp|B4NB54|NCBP2_DROWI | Nuclear cap-binding protein subunit 2 OS=Drosophila willistoni GN=Cbp20 PE=3 SV=1 | 42 | 162 | 4.0E-56 |
| sp|Q293V6|NCBP2_DROPS | Nuclear cap-binding protein subunit 2 OS=Drosophila pseudoobscura pseudoobscura GN=Cbp20 PE=3 SV=1 | 42 | 163 | 2.0E-55 |
| sp|B4GLK8|NCBP2_DROPE | Nuclear cap-binding protein subunit 2 OS=Drosophila persimilis GN=Cbp20 PE=3 SV=1 | 42 | 163 | 2.0E-55 |
| sp|B4QV17|NCBP2_DROSI | Nuclear cap-binding protein subunit 2 OS=Drosophila simulans GN=Cbp20 PE=3 SV=1 | 42 | 165 | 4.0E-55 |
| sp|B4IBA4|NCBP2_DROSE | Nuclear cap-binding protein subunit 2 OS=Drosophila sechellia GN=Cbp20 PE=3 SV=1 | 42 | 165 | 4.0E-55 |
| sp|Q9V3L6|NCBP2_DROME | Nuclear cap-binding protein subunit 2 OS=Drosophila melanogaster GN=Cbp20 PE=1 SV=1 | 42 | 165 | 4.0E-55 |
| sp|Q84L14|NCBP2_ORYSJ | Nuclear cap-binding protein subunit 2 OS=Oryza sativa subsp. japonica GN=CBP20 PE=2 SV=1 | 39 | 165 | 4.0E-55 |
| sp|B4PL68|NCBP2_DROYA | Nuclear cap-binding protein subunit 2 OS=Drosophila yakuba GN=Cbp20 PE=3 SV=1 | 42 | 165 | 4.0E-55 |
| sp|B3P0D7|NCBP2_DROER | Nuclear cap-binding protein subunit 2 OS=Drosophila erecta GN=Cbp20 PE=3 SV=1 | 42 | 165 | 7.0E-55 |
| sp|B4M205|NCB2A_DROVI | Nuclear cap-binding protein subunit 2-A OS=Drosophila virilis GN=Cbp20-A PE=3 SV=1 | 42 | 162 | 6.0E-54 |
| sp|Q9XFD1|NCBP2_ARATH | Nuclear cap-binding protein subunit 2 OS=Arabidopsis thaliana GN=CBP20 PE=1 SV=1 | 39 | 165 | 2.0E-53 |
| sp|Q1HE01|NCBP2_BOMMO | Nuclear cap-binding protein subunit 2 OS=Bombyx mori PE=2 SV=1 | 42 | 148 | 4.0E-53 |
| sp|Q08920|NCBP2_YEAST | Nuclear cap-binding protein subunit 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CBC2 PE=1 SV=1 | 8 | 159 | 3.0E-52 |
| sp|A8Y1R8|NCBP2_CAEBR | Nuclear cap-binding protein subunit 2 OS=Caenorhabditis briggsae GN=ncbp-2 PE=3 SV=2 | 42 | 167 | 4.0E-52 |
| sp|Q93594|NCBP2_CAEEL | Nuclear cap-binding protein subunit 2 OS=Caenorhabditis elegans GN=ncbp-2 PE=3 SV=2 | 42 | 162 | 6.0E-52 |
| sp|Q754W7|NCBP2_ASHGO | Nuclear cap-binding protein subunit 2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CBC2 PE=3 SV=1 | 8 | 157 | 7.0E-52 |
| sp|A6PVI3|NCB2L_HUMAN | Nuclear cap-binding protein subunit 2-like OS=Homo sapiens GN=NCBP2L PE=3 SV=1 | 42 | 163 | 3.0E-45 |
| sp|Q28IQ9|CIRBP_XENTR | Cold-inducible RNA-binding protein OS=Xenopus tropicalis GN=cirbp PE=2 SV=1 | 51 | 123 | 8.0E-11 |
| sp|Q9DED4|CIRBB_XENLA | Cold-inducible RNA-binding protein B OS=Xenopus laevis GN=cirbp-b PE=1 SV=1 | 45 | 123 | 5.0E-10 |
| sp|Q5RF83|CIRBP_PONAB | Cold-inducible RNA-binding protein OS=Pongo abelii GN=CIRBP PE=2 SV=1 | 51 | 123 | 8.0E-10 |
| sp|Q14011|CIRBP_HUMAN | Cold-inducible RNA-binding protein OS=Homo sapiens GN=CIRBP PE=1 SV=1 | 51 | 123 | 8.0E-10 |
| sp|P60825|CIRBP_RAT | Cold-inducible RNA-binding protein OS=Rattus norvegicus GN=Cirbp PE=2 SV=1 | 51 | 123 | 1.0E-09 |
| sp|P60824|CIRBP_MOUSE | Cold-inducible RNA-binding protein OS=Mus musculus GN=Cirbp PE=1 SV=1 | 51 | 123 | 1.0E-09 |
| sp|P60826|CIRBP_CRIGR | Cold-inducible RNA-binding protein OS=Cricetulus griseus GN=CIRBP PE=2 SV=1 | 51 | 123 | 1.0E-09 |
| sp|Q9PTX2|CIRBP_LITCT | Cold-inducible RNA-binding protein OS=Lithobates catesbeiana GN=cirbp PE=2 SV=1 | 51 | 123 | 1.0E-08 |
| sp|P27476|NSR1_YEAST | Nuclear localization sequence-binding protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NSR1 PE=1 SV=1 | 33 | 124 | 3.0E-08 |
| sp|Q925G0|RBM3_RAT | RNA-binding protein 3 OS=Rattus norvegicus GN=Rbm3 PE=1 SV=2 | 51 | 123 | 4.0E-08 |
| sp|Q42404|RU17_ARATH | U1 small nuclear ribonucleoprotein 70 kDa OS=Arabidopsis thaliana GN=RNU1 PE=1 SV=1 | 37 | 127 | 4.0E-08 |
| sp|O89086|RBM3_MOUSE | RNA-binding protein 3 OS=Mus musculus GN=Rbm3 PE=1 SV=1 | 51 | 123 | 4.0E-08 |
| sp|O93235|CIRBA_XENLA | Cold-inducible RNA-binding protein A OS=Xenopus laevis GN=cirbp-a PE=1 SV=2 | 45 | 123 | 7.0E-08 |
| sp|Q6PG31|RNPS1_DANRE | RNA-binding protein with serine-rich domain 1 OS=Danio rerio GN=rnps1 PE=2 SV=1 | 35 | 116 | 1.0E-07 |
| sp|Q8BIQ5|CSTF2_MOUSE | Cleavage stimulation factor subunit 2 OS=Mus musculus GN=Cstf2 PE=1 SV=2 | 40 | 123 | 1.0E-07 |
| sp|P30352|SRSF2_CHICK | Serine/arginine-rich splicing factor 2 OS=Gallus gallus GN=SRSF2 PE=2 SV=1 | 49 | 124 | 2.0E-07 |
| sp|P0CR16|MRD1_CRYNJ | Multiple RNA-binding domain-containing protein 1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=MRD1 PE=3 SV=1 | 25 | 166 | 2.0E-07 |
| sp|P0CR17|MRD1_CRYNB | Multiple RNA-binding domain-containing protein 1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=MRD1 PE=3 SV=1 | 25 | 166 | 2.0E-07 |
| sp|W8E7I1|RBM3_CAPHI | RNA-binding protein 3 OS=Capra hircus GN=RBM3 PE=2 SV=2 | 51 | 123 | 3.0E-07 |
| sp|Q9V535|RBM8A_DROME | RNA-binding protein 8A OS=Drosophila melanogaster GN=tsu PE=1 SV=1 | 27 | 124 | 3.0E-07 |
| sp|Q5R1W5|SRSF2_PANTR | Serine/arginine-rich splicing factor 2 OS=Pan troglodytes GN=SRSF2 PE=2 SV=3 | 49 | 124 | 3.0E-07 |
| sp|Q28BZ1|RBM8A_XENTR | RNA-binding protein 8A OS=Xenopus tropicalis GN=rbm8a PE=2 SV=1 | 25 | 136 | 4.0E-07 |
| sp|Q4V898|RBMX_RAT | RNA-binding motif protein, X chromosome OS=Rattus norvegicus GN=Rbmx PE=1 SV=1 | 51 | 133 | 4.0E-07 |
| sp|Q9WV02|RBMX_MOUSE | RNA-binding motif protein, X chromosome OS=Mus musculus GN=Rbmx PE=1 SV=1 | 51 | 133 | 5.0E-07 |
| sp|Q499V6|ZCRB1_RAT | Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Rattus norvegicus GN=Zcrb1 PE=2 SV=1 | 49 | 124 | 5.0E-07 |
| sp|Q9CZ96|ZCRB1_MOUSE | Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Mus musculus GN=Zcrb1 PE=1 SV=1 | 49 | 124 | 5.0E-07 |
| sp|Q6PH90|RB8AB_XENLA | RNA-binding protein 8A-B OS=Xenopus laevis GN=rbm8a-b PE=2 SV=1 | 25 | 136 | 6.0E-07 |
| sp|Q9DF42|RB8AA_XENLA | RNA-binding protein 8A-A OS=Xenopus laevis GN=rbm8a-a PE=2 SV=1 | 20 | 136 | 7.0E-07 |
| sp|Q28E41|RNPS1_XENTR | RNA-binding protein with serine-rich domain 1 OS=Xenopus tropicalis GN=rnps1 PE=2 SV=1 | 35 | 116 | 7.0E-07 |
| sp|Q06A98|SRSF2_PIG | Serine/arginine-rich splicing factor 2 OS=Sus scrofa GN=SRSF2 PE=2 SV=1 | 49 | 124 | 7.0E-07 |
| sp|Q9H0L4|CSTFT_HUMAN | Cleavage stimulation factor subunit 2 tau variant OS=Homo sapiens GN=CSTF2T PE=1 SV=1 | 39 | 123 | 7.0E-07 |
| sp|Q8C7E9|CSTFT_MOUSE | Cleavage stimulation factor subunit 2 tau variant OS=Mus musculus GN=Cstf2t PE=1 SV=2 | 39 | 123 | 8.0E-07 |
| sp|P98179|RBM3_HUMAN | RNA-binding protein 3 OS=Homo sapiens GN=RBM3 PE=1 SV=1 | 51 | 123 | 8.0E-07 |
| sp|Q6PDU1|SRSF2_RAT | Serine/arginine-rich splicing factor 2 OS=Rattus norvegicus GN=Srsf2 PE=1 SV=3 | 49 | 124 | 9.0E-07 |
| sp|Q62093|SRSF2_MOUSE | Serine/arginine-rich splicing factor 2 OS=Mus musculus GN=Srsf2 PE=1 SV=4 | 49 | 124 | 9.0E-07 |
| sp|Q01130|SRSF2_HUMAN | Serine/arginine-rich splicing factor 2 OS=Homo sapiens GN=SRSF2 PE=1 SV=4 | 49 | 124 | 9.0E-07 |
| sp|Q3MHR5|SRSF2_BOVIN | Serine/arginine-rich splicing factor 2 OS=Bos taurus GN=SRSF2 PE=2 SV=3 | 49 | 124 | 9.0E-07 |
| sp|Q8HXM1|CSTF2_BOVIN | Cleavage stimulation factor subunit 2 OS=Bos taurus GN=CSTF2 PE=2 SV=1 | 39 | 123 | 1.0E-06 |
| sp|Q5RDA3|CSTF2_PONAB | Cleavage stimulation factor subunit 2 OS=Pongo abelii GN=CSTF2 PE=2 SV=1 | 39 | 123 | 1.0E-06 |
| sp|Q5D018|RBM8A_DANRE | RNA-binding protein 8A OS=Danio rerio GN=rbm8a PE=2 SV=1 | 24 | 124 | 1.0E-06 |
| sp|P33240|CSTF2_HUMAN | Cleavage stimulation factor subunit 2 OS=Homo sapiens GN=CSTF2 PE=1 SV=1 | 39 | 123 | 1.0E-06 |
| sp|O14327|PAB2_SCHPO | Polyadenylate-binding protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pab2 PE=1 SV=1 | 47 | 122 | 1.0E-06 |
| sp|Q9ZUU4|CP29B_ARATH | RNA-binding protein CP29B, chloroplastic OS=Arabidopsis thaliana GN=CP29B PE=1 SV=1 | 28 | 126 | 1.0E-06 |
| sp|Q5XG24|RNP1A_XENLA | RNA-binding protein with serine-rich domain 1-A OS=Xenopus laevis GN=rnps1-a PE=2 SV=1 | 35 | 116 | 2.0E-06 |
| sp|Q3KPW1|RNP1B_XENLA | RNA-binding protein with serine-rich domain 1-B OS=Xenopus laevis GN=rnps1-b PE=2 SV=1 | 35 | 116 | 2.0E-06 |
| sp|P08621|RU17_HUMAN | U1 small nuclear ribonucleoprotein 70 kDa OS=Homo sapiens GN=SNRNP70 PE=1 SV=2 | 39 | 125 | 2.0E-06 |
| sp|Q62376|RU17_MOUSE | U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus GN=Snrnp70 PE=1 SV=2 | 39 | 125 | 2.0E-06 |
| sp|Q44556|RBPD_NOSS1 | Putative RNA-binding protein RbpD OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=rbpD PE=3 SV=3 | 50 | 111 | 3.0E-06 |
| sp|B5DGI7|RBM8A_SALSA | RNA-binding protein 8A OS=Salmo salar GN=rbm8a PE=2 SV=1 | 25 | 124 | 3.0E-06 |
| sp|Q1RMR2|RU17_BOVIN | U1 small nuclear ribonucleoprotein 70 kDa OS=Bos taurus GN=SNRNP70 PE=2 SV=1 | 39 | 125 | 4.0E-06 |
| sp|P62997|TRA2B_RAT | Transformer-2 protein homolog beta OS=Rattus norvegicus GN=Tra2b PE=1 SV=1 | 51 | 154 | 4.0E-06 |
| sp|P62996|TRA2B_MOUSE | Transformer-2 protein homolog beta OS=Mus musculus GN=Tra2b PE=1 SV=1 | 51 | 154 | 4.0E-06 |
| sp|P62995|TRA2B_HUMAN | Transformer-2 protein homolog beta OS=Homo sapiens GN=TRA2B PE=1 SV=1 | 51 | 154 | 4.0E-06 |
| sp|Q3ZBT6|TRA2B_BOVIN | Transformer-2 protein homolog beta OS=Bos taurus GN=TRA2B PE=2 SV=1 | 51 | 154 | 4.0E-06 |
| sp|A7SKE9|EIF3G_NEMVE | Eukaryotic translation initiation factor 3 subunit G OS=Nematostella vectensis GN=v1g171563 PE=3 SV=1 | 32 | 124 | 6.0E-06 |
| sp|P19018|TRA2_DROME | Transformer-2 sex-determining protein OS=Drosophila melanogaster GN=tra2 PE=1 SV=1 | 42 | 139 | 7.0E-06 |
| sp|Q9CWZ3|RBM8A_MOUSE | RNA-binding protein 8A OS=Mus musculus GN=Rbm8a PE=1 SV=3 | 25 | 124 | 7.0E-06 |
| sp|Q99181|HSH49_YEAST | Protein HSH49 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HSH49 PE=1 SV=1 | 49 | 122 | 7.0E-06 |
| sp|Q9BRL6|SRSF8_HUMAN | Serine/arginine-rich splicing factor 8 OS=Homo sapiens GN=SRSF8 PE=1 SV=1 | 50 | 124 | 7.0E-06 |
| sp|Q27W01|RBM8A_RAT | RNA-binding protein 8A OS=Rattus norvegicus GN=Rbm8a PE=1 SV=1 | 25 | 124 | 7.0E-06 |
| sp|Q9Y5S9|RBM8A_HUMAN | RNA-binding protein 8A OS=Homo sapiens GN=RBM8A PE=1 SV=1 | 25 | 124 | 7.0E-06 |
| sp|Q3ZCE8|RBM8A_BOVIN | RNA-binding protein 8A OS=Bos taurus GN=RBM8A PE=2 SV=2 | 25 | 124 | 7.0E-06 |
| sp|Q91VM5|RMXL1_MOUSE | RNA binding motif protein, X-linked-like-1 OS=Mus musculus GN=Rbmxl1 PE=2 SV=1 | 51 | 129 | 9.0E-06 |
| sp|A5A6M3|RBMX_PANTR | RNA-binding motif protein, X chromosome OS=Pan troglodytes GN=RBMX PE=2 SV=1 | 51 | 129 | 1.0E-05 |
| sp|P38159|RBMX_HUMAN | RNA-binding motif protein, X chromosome OS=Homo sapiens GN=RBMX PE=1 SV=3 | 51 | 129 | 1.0E-05 |
| sp|Q4R7F0|RBMX_MACFA | RNA-binding motif protein, X chromosome OS=Macaca fascicularis GN=RBMX PE=2 SV=1 | 51 | 129 | 1.0E-05 |
| sp|Q66II8|RU17_XENTR | U1 small nuclear ribonucleoprotein 70 kDa OS=Xenopus tropicalis GN=snrnp70 PE=2 SV=1 | 50 | 127 | 1.0E-05 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0003723 | RNA binding | Yes |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0005488 | binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0003676 | nucleic acid binding | No |
| GO:0003674 | molecular_function | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Nucleus | Nuclear localization signal | 0.36 | 0.827 | 0.0543 | 0.0313 | 0.0352 | 0.0077 | 0.1081 | 0.0134 | 0.0057 | 0.0005 |
| Orthofinder run ID | 4 |
| Orthogroup | 2963 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|5032 MRPGARSTVDRLDRPSAYYQSRNKRRRERDDDGADDKAEPAEDPLANATTLYVGNLSFYTTEEQVYELFSKCGEI KRLVMGLDRFQKTPCGFCFVEYYTHQDALDCMKYIGGTKLDERIIRTDLDPGFEEGRQYGRGKSGGQVRDEYRED YDEGRGGVGRAIQSERLKDYDEEGRYVR* |
| Coding | >Hirsu2|5032 ATGCGCCCGGGCGCGAGAAGTACGGTCGACCGGCTCGACAGGCCGAGCGCGTACTACCAGAGCAGGAACAAACGG CGACGCGAGCGCGACGACGACGGCGCCGACGACAAGGCAGAGCCGGCCGAAGACCCCCTCGCCAATGCCACGACG CTCTATGTCGGCAATCTTTCCTTCTACACGACCGAGGAGCAGGTGTACGAGCTCTTCTCCAAGTGCGGCGAGATC AAGCGCCTCGTCATGGGCCTGGACCGGTTCCAGAAGACGCCGTGCGGCTTCTGCTTCGTCGAATACTACACCCAC CAGGACGCCCTCGACTGCATGAAGTACATCGGCGGCACCAAGCTCGACGAACGCATCATACGCACCGATCTCGAC CCCGGCTTCGAGGAGGGCAGGCAGTACGGCCGCGGCAAGTCGGGTGGCCAGGTGCGCGACGAATACCGCGAGGAC TACGACGAGGGGCGCGGCGGCGTCGGCAGGGCCATTCAGTCGGAGCGCTTGAAGGACTACGACGAGGAGGGGCGG TATGTGCGGTAG |
| Transcript | >Hirsu2|5032 ATGCGCCCGGGCGCGAGAAGTACGGTCGACCGGCTCGACAGGCCGAGCGCGTACTACCAGAGCAGGAACAAACGG CGACGCGAGCGCGACGACGACGGCGCCGACGACAAGGCAGAGCCGGCCGAAGACCCCCTCGCCAATGCCACGACG CTCTATGTCGGCAATCTTTCCTTCTACACGACCGAGGAGCAGGTGTACGAGCTCTTCTCCAAGTGCGGCGAGATC AAGCGCCTCGTCATGGGCCTGGACCGGTTCCAGAAGACGCCGTGCGGCTTCTGCTTCGTCGAATACTACACCCAC CAGGACGCCCTCGACTGCATGAAGTACATCGGCGGCACCAAGCTCGACGAACGCATCATACGCACCGATCTCGAC CCCGGCTTCGAGGAGGGCAGGCAGTACGGCCGCGGCAAGTCGGGTGGCCAGGTGCGCGACGAATACCGCGAGGAC TACGACGAGGGGCGCGGCGGCGTCGGCAGGGCCATTCAGTCGGAGCGCTTGAAGGACTACGACGAGGAGGGGCGG TATGTGCGGTAG |
| Gene | >Hirsu2|5032 ATGCGCCCGGGCGCGAGAAGTACGGTCGACCGGCTCGACAGGCCGAGCGCGTACTACCAGAGCAGGGTACCCCCG TCCCTCTCTCTCTCTCTGGCAAACGGGGCAGGGCGGCGACGCTGACCGGCCGGCAGAACAAACGGCGACGCGAGC GCGACGACGACGGCGCCGACGACAAGGCAGAGCCGGCCGAAGACCCCCTCGCCAATGCCACGACGCTCTATGTCG GCAATCTGTTCGCCTCTCCTCTTTTCCTCTCCCCCCCCTTTCTGCTCTTCTCCTCTCACCGCGGGCTACCGTGCC TTCCACCTCGAACCGTCGGCTAACGCAGACGCGCCTCTCCTCTCCACCGGCCCAGTTCCTTCTACACGACCGAGG AGCAGGTGTACGAGCTCTTCTCCAAGTGCGGCGAGATCAAGCGCCTCGTCATGGGCCTGGACCGGTTCCAGAAGA CGCCGTGCGGCTTCTGCTTCGTCGAATACTACACCCACCAGGACGCCCTCGACTGCATGAAGTACATCGGCGGCA CCAAGCTCGACGAACGCATCATACGCACCGATCTCGACCCCGGCTTCGAGGAGGGCAGGCAGTACGGCCGCGGCA AGTCGGGTGGCCAGGTGCGCGACGAATACCGCGAGGACTACGACGAGGGGCGCGGCGGCGTCGGCAGGGCCATTC AGTCGGAGCGCTTGAAGGACTACGACGAGGAGGGGCGGTATGTGCGGTAG |