© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|5027 |
| Gene name | |
| Location | Contig_252:15029..15518 |
| Strand | - |
| Gene length (bp) | 489 |
| Transcript length (bp) | 489 |
| Coding sequence length (bp) | 489 |
| Protein length (aa) | 163 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05620 | TMEM208_SND2 | SRP-independent targeting protein 2/TMEM208 | 1.8E-51 | 1 | 158 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O14193|MUG69_SCHPO | Meiotically up-regulated gene 69 protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug69 PE=1 SV=4 | 1 | 125 | 3.0E-09 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 27 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 15 | 37 | 22 |
| 2 | 86 | 108 | 22 |
| 3 | 112 | 134 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|5027 MAQKAKKDLARHNAAALNNLHLTSLAANSLFILFHLLFRRRSLLAYGLLSLPAWGCQYVLERSGRPKYDAATKAL RSPGEDMAAQGLTEYMFDVVWVTWICYAAVLLAGNWAWLLWAVIPGYGLYLGSGLLGMGRRKMAEMQGAGQDAAP QGQGNRRTRRAA* |
| Coding | >Hirsu2|5027 ATGGCCCAAAAGGCGAAGAAGGACCTGGCCAGGCACAACGCCGCCGCCCTCAACAACCTGCACCTCACTTCGCTC GCCGCCAACAGCCTCTTCATCCTCTTCCACTTGCTCTTCCGGCGCCGCTCGCTGCTCGCCTACGGCCTCCTGTCG CTCCCGGCCTGGGGCTGCCAGTACGTGCTCGAGCGGTCAGGCCGCCCCAAGTACGACGCCGCCACCAAGGCGCTG AGGAGCCCCGGGGAGGACATGGCGGCGCAGGGCCTGACGGAATACATGTTCGACGTCGTCTGGGTCACCTGGATC TGTTACGCCGCCGTGCTGCTGGCTGGCAACTGGGCCTGGCTCCTGTGGGCCGTGATACCCGGCTACGGCCTGTAT CTCGGCTCCGGGCTGCTGGGCATGGGCAGGCGCAAGATGGCCGAAATGCAGGGCGCCGGCCAGGACGCCGCCCCC CAGGGCCAAGGCAATCGCCGTACGAGGAGAGCGGCGTAG |
| Transcript | >Hirsu2|5027 ATGGCCCAAAAGGCGAAGAAGGACCTGGCCAGGCACAACGCCGCCGCCCTCAACAACCTGCACCTCACTTCGCTC GCCGCCAACAGCCTCTTCATCCTCTTCCACTTGCTCTTCCGGCGCCGCTCGCTGCTCGCCTACGGCCTCCTGTCG CTCCCGGCCTGGGGCTGCCAGTACGTGCTCGAGCGGTCAGGCCGCCCCAAGTACGACGCCGCCACCAAGGCGCTG AGGAGCCCCGGGGAGGACATGGCGGCGCAGGGCCTGACGGAATACATGTTCGACGTCGTCTGGGTCACCTGGATC TGTTACGCCGCCGTGCTGCTGGCTGGCAACTGGGCCTGGCTCCTGTGGGCCGTGATACCCGGCTACGGCCTGTAT CTCGGCTCCGGGCTGCTGGGCATGGGCAGGCGCAAGATGGCCGAAATGCAGGGCGCCGGCCAGGACGCCGCCCCC CAGGGCCAAGGCAATCGCCGTACGAGGAGAGCGGCGTAG |
| Gene | >Hirsu2|5027 ATGGCCCAAAAGGCGAAGAAGGACCTGGCCAGGCACAACGCCGCCGCCCTCAACAACCTGCACCTCACTTCGCTC GCCGCCAACAGCCTCTTCATCCTCTTCCACTTGCTCTTCCGGCGCCGCTCGCTGCTCGCCTACGGCCTCCTGTCG CTCCCGGCCTGGGGCTGCCAGTACGTGCTCGAGCGGTCAGGCCGCCCCAAGTACGACGCCGCCACCAAGGCGCTG AGGAGCCCCGGGGAGGACATGGCGGCGCAGGGCCTGACGGAATACATGTTCGACGTCGTCTGGGTCACCTGGATC TGTTACGCCGCCGTGCTGCTGGCTGGCAACTGGGCCTGGCTCCTGTGGGCCGTGATACCCGGCTACGGCCTGTAT CTCGGCTCCGGGCTGCTGGGCATGGGCAGGCGCAAGATGGCCGAAATGCAGGGCGCCGGCCAGGACGCCGCCCCC CAGGGCCAAGGCAATCGCCGTACGAGGAGAGCGGCGTAG |