© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|5004 |
| Gene name | |
| Location | Contig_2504:797..2174 |
| Strand | + |
| Gene length (bp) | 1377 |
| Transcript length (bp) | 1290 |
| Coding sequence length (bp) | 1290 |
| Protein length (aa) | 430 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03151 | TPT | Triose-phosphate Transporter family | 6.1E-57 | 19 | 342 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O94695|YG1B_SCHPO | Putative transporter C83.11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC83.11 PE=1 SV=2 | 20 | 382 | 2.0E-88 |
| sp|P22215|SLY41_YEAST | Uncharacterized transporter SLY41 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SLY41 PE=1 SV=2 | 16 | 355 | 6.0E-49 |
| sp|Q9VR50|S35E1_DROME | Solute carrier family 35 member E1 homolog OS=Drosophila melanogaster GN=CG14621 PE=2 SV=1 | 20 | 373 | 5.0E-36 |
| sp|Q84QU8|PPT2_ORYSJ | Phosphoenolpyruvate/phosphate translocator 2, chloroplastic OS=Oryza sativa subsp. japonica GN=PPT2 PE=2 SV=1 | 26 | 344 | 1.0E-33 |
| sp|Q5VQL3|PPT3_ORYSJ | Phosphoenolpyruvate/phosphate translocator 3, chloroplastic OS=Oryza sativa subsp. japonica GN=PPT3 PE=2 SV=1 | 19 | 352 | 1.0E-32 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O94695|YG1B_SCHPO | Putative transporter C83.11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC83.11 PE=1 SV=2 | 20 | 382 | 2.0E-88 |
| sp|P22215|SLY41_YEAST | Uncharacterized transporter SLY41 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SLY41 PE=1 SV=2 | 16 | 355 | 6.0E-49 |
| sp|Q9VR50|S35E1_DROME | Solute carrier family 35 member E1 homolog OS=Drosophila melanogaster GN=CG14621 PE=2 SV=1 | 20 | 373 | 5.0E-36 |
| sp|Q84QU8|PPT2_ORYSJ | Phosphoenolpyruvate/phosphate translocator 2, chloroplastic OS=Oryza sativa subsp. japonica GN=PPT2 PE=2 SV=1 | 26 | 344 | 1.0E-33 |
| sp|Q5VQL3|PPT3_ORYSJ | Phosphoenolpyruvate/phosphate translocator 3, chloroplastic OS=Oryza sativa subsp. japonica GN=PPT3 PE=2 SV=1 | 19 | 352 | 1.0E-32 |
| sp|P0C6B1|S35E1_RAT | Solute carrier family 35 member E1 OS=Rattus norvegicus GN=Slc35e1 PE=3 SV=1 | 19 | 354 | 2.0E-32 |
| sp|Q96K37|S35E1_HUMAN | Solute carrier family 35 member E1 OS=Homo sapiens GN=SLC35E1 PE=1 SV=2 | 19 | 367 | 2.0E-31 |
| sp|Q8CD26|S35E1_MOUSE | Solute carrier family 35 member E1 OS=Mus musculus GN=Slc35e1 PE=1 SV=2 | 19 | 354 | 2.0E-31 |
| sp|Q69VR7|PPT1_ORYSJ | Phosphoenolpyruvate/phosphate translocator 1, chloroplastic OS=Oryza sativa subsp. japonica GN=PPT1 PE=2 SV=1 | 26 | 344 | 4.0E-30 |
| sp|P39542|YJT3_YEAST | Uncharacterized transporter YJL193W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YJL193W PE=1 SV=1 | 6 | 356 | 7.0E-30 |
| sp|Q8H0T6|PPT2_ARATH | Phosphoenolpyruvate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=PPT2 PE=2 SV=1 | 26 | 347 | 2.0E-26 |
| sp|Q8RXN3|PPT1_ARATH | Phosphoenolpyruvate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=PPT1 PE=1 SV=1 | 19 | 344 | 3.0E-26 |
| sp|Q9LF61|XPT_ARATH | Xylulose 5-phosphate/phosphate translocator, chloroplastic OS=Arabidopsis thaliana GN=XPT PE=1 SV=1 | 26 | 350 | 1.0E-25 |
| sp|P52178|TPT2_BRAOB | Triose phosphate/phosphate translocator, non-green plastid, chloroplastic OS=Brassica oleracea var. botrytis GN=NGTPT PE=2 SV=1 | 19 | 344 | 4.0E-25 |
| sp|Q94B38|GPT2_ARATH | Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=2 | 27 | 347 | 5.0E-24 |
| sp|P52177|TPT1_BRAOB | Triose phosphate/phosphate translocator, chloroplastic OS=Brassica oleracea var. botrytis GN=TPT PE=2 SV=1 | 22 | 354 | 4.0E-23 |
| sp|Q9M5A9|GPT1_ARATH | Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1 | 27 | 345 | 4.0E-22 |
| sp|Q9FTT3|TPT_ORYSJ | Triose phosphate/phosphate translocator TPT, chloroplastic OS=Oryza sativa subsp. japonica GN=TPT PE=2 SV=1 | 25 | 356 | 9.0E-22 |
| sp|P11869|TPT_SPIOL | Triose phosphate/phosphate translocator, chloroplastic OS=Spinacia oleracea PE=1 SV=1 | 25 | 354 | 2.0E-21 |
| sp|P29463|TPT_SOLTU | Triose phosphate/phosphate translocator, chloroplastic OS=Solanum tuberosum GN=TPT PE=2 SV=1 | 25 | 356 | 1.0E-20 |
| sp|Q9ZSR7|TPT_ARATH | Triose phosphate/phosphate translocator TPT, chloroplastic OS=Arabidopsis thaliana GN=TPT PE=1 SV=1 | 25 | 354 | 2.0E-20 |
| sp|P21727|TPT_PEA | Triose phosphate/phosphate translocator, chloroplastic OS=Pisum sativum PE=1 SV=1 | 27 | 354 | 2.0E-20 |
| sp|P49132|TPT_FLATR | Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria trinervia GN=TPT PE=2 SV=1 | 25 | 354 | 5.0E-20 |
| sp|P49131|TPT_FLAPR | Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1 | 25 | 355 | 7.0E-20 |
| sp|P49133|TPT_MAIZE | Triose phosphate/phosphate translocator, chloroplastic OS=Zea mays GN=TPT PE=1 SV=1 | 25 | 356 | 1.0E-19 |
| sp|Q8C811|S35E2_MOUSE | Solute carrier family 35 member E2 OS=Mus musculus GN=Slc35e2 PE=2 SV=1 | 17 | 374 | 3.0E-18 |
| sp|P0CK96|S352B_HUMAN | Solute carrier family 35 member E2B OS=Homo sapiens GN=SLC35E2B PE=2 SV=1 | 17 | 374 | 3.0E-15 |
| sp|Q9SS40|PT310_ARATH | Probable sugar phosphate/phosphate translocator At3g10290 OS=Arabidopsis thaliana GN=At3g10290 PE=3 SV=1 | 23 | 356 | 6.0E-12 |
| sp|Q6DBP3|PT505_ARATH | Probable sugar phosphate/phosphate translocator At5g05820 OS=Arabidopsis thaliana GN=At5g05820 PE=2 SV=1 | 119 | 350 | 1.0E-11 |
| sp|Q9FYE5|PT504_ARATH | Probable sugar phosphate/phosphate translocator At5g04160 OS=Arabidopsis thaliana GN=At5g04160 PE=2 SV=1 | 23 | 356 | 1.0E-10 |
| sp|Q9SFE9|GONS5_ARATH | GDP-mannose transporter GONST5 OS=Arabidopsis thaliana GN=GONST5 PE=2 SV=1 | 110 | 373 | 3.0E-10 |
| sp|Q5XF09|PT311_ARATH | Probable sugar phosphate/phosphate translocator At3g11320 OS=Arabidopsis thaliana GN=At3g11320 PE=2 SV=1 | 119 | 350 | 3.0E-10 |
| sp|Q8H184|PT106_ARATH | Probable sugar phosphate/phosphate translocator At1g06470 OS=Arabidopsis thaliana GN=At1g06470 PE=2 SV=1 | 11 | 364 | 1.0E-08 |
| sp|Q9LDH3|PT112_ARATH | Probable sugar phosphate/phosphate translocator At1g12500 OS=Arabidopsis thaliana GN=At1g12500 PE=1 SV=1 | 91 | 360 | 2.0E-08 |
| sp|Q9C521|UGAL1_ARATH | UDP-galactose transporter 1 OS=Arabidopsis thaliana GN=UDP-GALT1 PE=2 SV=1 | 110 | 378 | 5.0E-08 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 33 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 9 | 31 | 22 |
| 2 | 51 | 73 | 22 |
| 3 | 94 | 111 | 17 |
| 4 | 121 | 143 | 22 |
| 5 | 150 | 172 | 22 |
| 6 | 177 | 196 | 19 |
| 7 | 223 | 245 | 22 |
| 8 | 281 | 303 | 22 |
| 9 | 310 | 332 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|5004 MSQNAHEIAGALRAPVSPRLVVLCLLWYTSSALTNTSSKSILIAFDKPATLTVVQFAFVSSLCIALAWLASIFPA LRTQMAVLRHPIRRPSKDVIMNTLPLAAFQIGGHLLSSTATAKIPVSLVHTIKGLSPLFTVLAYRIFYDIRYPQA TYLSLAPLTIGVMLACSGKATYGGHLLGVLQALLATLIFVTQNIVSKKIFNEAAKAEAEAPGVQSKKLDKLNLLC YSSGMAFVVTLPIWFWAEGIDILGDFLHDGAIDLSNNPIAMDHGRLALEFVFNGVFHFSQNMLAFVLLSIVSPVT YSVASLVKRVFVIVIAIMWFKSPTTPIQAVGIALTLFGLYLYDRSSESNKADRRARLIAQSRSGTPLLPVDEKQP AVGYRSPSLLTHLSAHPYTEGHFGLAAAADDAKKADKVGRSRSGLSSTSWMLRQ* |
| Coding | >Hirsu2|5004 ATGAGCCAGAACGCTCACGAAATCGCGGGTGCGCTGAGAGCCCCTGTGTCACCAAGACTGGTCGTCCTGTGCTTA CTCTGGTACACATCCTCCGCGCTGACCAACACATCCTCTAAATCTATCCTCATCGCCTTCGATAAGCCGGCGACT CTGACCGTCGTTCAATTTGCATTCGTTTCCTCGCTCTGCATTGCCCTCGCCTGGCTGGCCAGCATCTTTCCTGCT CTACGAACTCAAATGGCTGTCTTGAGGCATCCTATCCGCCGGCCGAGCAAGGACGTCATCATGAACACTCTTCCT CTTGCCGCCTTCCAAATCGGCGGCCATCTGCTGAGCTCGACTGCCACAGCCAAGATTCCAGTCTCTCTGGTCCAC ACCATCAAGGGTCTGTCACCCTTGTTCACCGTGCTGGCCTACAGGATCTTCTACGACATTCGATACCCCCAGGCC ACCTACCTTTCGCTCGCACCCCTGACTATCGGCGTCATGCTCGCCTGCTCGGGAAAGGCGACGTATGGCGGGCAC TTGCTGGGGGTCTTGCAGGCACTGTTGGCGACGCTCATCTTCGTCACGCAAAACATTGTCTCCAAGAAGATCTTC AATGAGGCAGCCAAGGCCGAGGCCGAAGCTCCTGGCGTGCAGTCCAAGAAGCTAGACAAGCTCAACCTACTGTGC TATTCTTCTGGCATGGCATTCGTTGTGACCCTACCCATCTGGTTTTGGGCCGAGGGCATTGACATTCTGGGAGAC TTCCTGCACGACGGCGCGATAGATCTCAGTAACAACCCTATTGCAATGGACCACGGTCGCCTGGCCCTCGAATTC GTCTTCAATGGCGTCTTTCACTTCAGCCAAAACATGTTGGCATTTGTACTGCTGTCGATCGTCTCCCCCGTCACG TACTCAGTCGCGAGCCTGGTCAAGAGGGTCTTTGTCATCGTTATAGCCATCATGTGGTTCAAGAGTCCCACAACG CCCATCCAGGCGGTGGGCATCGCGCTGACATTGTTCGGCTTATACCTTTACGATCGGTCTAGCGAGAGCAACAAG GCCGATCGCAGGGCGCGCCTGATAGCACAATCTCGGAGCGGGACCCCGCTCCTCCCTGTCGACGAGAAACAGCCA GCGGTCGGCTATCGCAGCCCCAGTCTTTTGACCCATTTGAGCGCCCACCCTTACACAGAAGGCCACTTCGGCTTG GCCGCCGCCGCCGACGACGCTAAGAAAGCTGACAAGGTCGGCCGTAGCCGTTCTGGGCTTAGCAGCACAAGTTGG ATGTTACGCCAATGA |
| Transcript | >Hirsu2|5004 ATGAGCCAGAACGCTCACGAAATCGCGGGTGCGCTGAGAGCCCCTGTGTCACCAAGACTGGTCGTCCTGTGCTTA CTCTGGTACACATCCTCCGCGCTGACCAACACATCCTCTAAATCTATCCTCATCGCCTTCGATAAGCCGGCGACT CTGACCGTCGTTCAATTTGCATTCGTTTCCTCGCTCTGCATTGCCCTCGCCTGGCTGGCCAGCATCTTTCCTGCT CTACGAACTCAAATGGCTGTCTTGAGGCATCCTATCCGCCGGCCGAGCAAGGACGTCATCATGAACACTCTTCCT CTTGCCGCCTTCCAAATCGGCGGCCATCTGCTGAGCTCGACTGCCACAGCCAAGATTCCAGTCTCTCTGGTCCAC ACCATCAAGGGTCTGTCACCCTTGTTCACCGTGCTGGCCTACAGGATCTTCTACGACATTCGATACCCCCAGGCC ACCTACCTTTCGCTCGCACCCCTGACTATCGGCGTCATGCTCGCCTGCTCGGGAAAGGCGACGTATGGCGGGCAC TTGCTGGGGGTCTTGCAGGCACTGTTGGCGACGCTCATCTTCGTCACGCAAAACATTGTCTCCAAGAAGATCTTC AATGAGGCAGCCAAGGCCGAGGCCGAAGCTCCTGGCGTGCAGTCCAAGAAGCTAGACAAGCTCAACCTACTGTGC TATTCTTCTGGCATGGCATTCGTTGTGACCCTACCCATCTGGTTTTGGGCCGAGGGCATTGACATTCTGGGAGAC TTCCTGCACGACGGCGCGATAGATCTCAGTAACAACCCTATTGCAATGGACCACGGTCGCCTGGCCCTCGAATTC GTCTTCAATGGCGTCTTTCACTTCAGCCAAAACATGTTGGCATTTGTACTGCTGTCGATCGTCTCCCCCGTCACG TACTCAGTCGCGAGCCTGGTCAAGAGGGTCTTTGTCATCGTTATAGCCATCATGTGGTTCAAGAGTCCCACAACG CCCATCCAGGCGGTGGGCATCGCGCTGACATTGTTCGGCTTATACCTTTACGATCGGTCTAGCGAGAGCAACAAG GCCGATCGCAGGGCGCGCCTGATAGCACAATCTCGGAGCGGGACCCCGCTCCTCCCTGTCGACGAGAAACAGCCA GCGGTCGGCTATCGCAGCCCCAGTCTTTTGACCCATTTGAGCGCCCACCCTTACACAGAAGGCCACTTCGGCTTG GCCGCCGCCGCCGACGACGCTAAGAAAGCTGACAAGGTCGGCCGTAGCCGTTCTGGGCTTAGCAGCACAAGTTGG ATGTTACGCCAATGA |
| Gene | >Hirsu2|5004 ATGAGCCAGAACGCTCACGAAATCGCGGGTGCGCTGAGAGCCCCTGTGTCACCAAGACTGGTCGTACGTTACATC ACCTTCAACTCGTCGTTGAATCGCTTGGATTTTGGCCACTCTTTCGTCGGTAGCTAACCGATCGTCGGTCGGCAG GTCCTGTGCTTACTCTGGTACACATCCTCCGCGCTGACCAACACATCCTCTAAATCTATCCTCATCGCCTTCGAT AAGCCGGCGACTCTGACCGTCGTTCAATTTGCATTCGTTTCCTCGCTCTGCATTGCCCTCGCCTGGCTGGCCAGC ATCTTTCCTGCTCTACGAACTCAAATGGCTGTCTTGAGGCATCCTATCCGCCGGCCGAGCAAGGACGTCATCATG AACACTCTTCCTCTTGCCGCCTTCCAAATCGGCGGCCATCTGCTGAGCTCGACTGCCACAGCCAAGATTCCAGTC TCTCTGGTCCACACCATCAAGGGTCTGTCACCCTTGTTCACCGTGCTGGCCTACAGGATCTTCTACGACATTCGA TACCCCCAGGCCACCTACCTTTCGCTCGCACCCCTGACTATCGGCGTCATGCTCGCCTGCTCGGGAAAGGCGACG TATGGCGGGCACTTGCTGGGGGTCTTGCAGGCACTGTTGGCGACGCTCATCTTCGTCACGCAAAACATTGTCTCC AAGAAGATCTTCAATGAGGCAGCCAAGGCCGAGGCCGAAGCTCCTGGCGTGCAGTCCAAGAAGCTAGACAAGCTC AACCTACTGTGCTATTCTTCTGGCATGGCATTCGTTGTGACCCTACCCATCTGGTTTTGGGCCGAGGGCATTGAC ATTCTGGGAGACTTCCTGCACGACGGCGCGATAGATCTCAGTAACAACCCTATTGCAATGGACCACGGTCGCCTG GCCCTCGAATTCGTCTTCAATGGCGTCTTTCACTTCAGCCAAAACATGTTGGCATTTGTACTGCTGTCGATCGTC TCCCCCGTCACGTACTCAGTCGCGAGCCTGGTCAAGAGGGTCTTTGTCATCGTTATAGCCATCATGTGGTTCAAG AGTCCCACAACGCCCATCCAGGCGGTGGGCATCGCGCTGACATTGTTCGGCTTATACCTTTACGATCGGTCTAGC GAGAGCAACAAGGCCGATCGCAGGGCGCGCCTGATAGCACAATCTCGGAGCGGGACCCCGCTCCTCCCTGTCGAC GAGAAACAGCCAGCGGTCGGCTATCGCAGCCCCAGTCTTTTGACCCATTTGAGCGCCCACCCTTACACAGAAGGC CACTTCGGCTTGGCCGCCGCCGCCGACGACGCTAAGAAAGCTGACAAGGTCGGCCGTAGCCGTTCTGGGCTTAGC AGCACAAGTTGGATGTTACGCCAATGA |