© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|4989 |
| Gene name | |
| Location | Contig_250:6173..9132 |
| Strand | + |
| Gene length (bp) | 2959 |
| Transcript length (bp) | 2904 |
| Coding sequence length (bp) | 2904 |
| Protein length (aa) | 968 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P11551|FUCP_ECOLI | L-fucose-proton symporter OS=Escherichia coli (strain K12) GN=fucP PE=1 SV=3 | 430 | 856 | 3.0E-14 |
| sp|P0C105|GLUP_BRUAB | Glucose/galactose transporter OS=Brucella abortus biovar 1 (strain 9-941) GN=gluP PE=3 SV=1 | 425 | 692 | 2.0E-13 |
| sp|Q2YIJ8|GLUP_BRUA2 | Glucose/galactose transporter OS=Brucella abortus (strain 2308) GN=gluP PE=3 SV=1 | 425 | 692 | 2.0E-13 |
| sp|Q8YB48|GLUP_BRUME | Glucose/galactose transporter OS=Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) GN=gluP PE=3 SV=1 | 425 | 692 | 1.0E-11 |
| sp|P44776|FUCP_HAEIN | L-fucose permease OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=fucP PE=3 SV=1 | 425 | 608 | 4.0E-10 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 33 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 15 | 34 | 19 |
| 2 | 55 | 77 | 22 |
| 3 | 97 | 119 | 22 |
| 4 | 131 | 153 | 22 |
| 5 | 213 | 235 | 22 |
| 6 | 423 | 445 | 22 |
| 7 | 460 | 482 | 22 |
| 8 | 502 | 524 | 22 |
| 9 | 539 | 561 | 22 |
| 10 | 607 | 629 | 22 |
| 11 | 734 | 753 | 19 |
| 12 | 765 | 787 | 22 |
| 13 | 791 | 813 | 22 |
| 14 | 825 | 847 | 22 |
| 15 | 852 | 874 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|4989 MDVDASGSDAPAPNRGPAVFAVTTATLVLSSAFVGARIVCRHFVVHNVSWDDRVMIFAWLIAFFLSFTIDLGTVN GLGKHDADISQHDLSTLRHCEYVFSILYNPALMATKTSILIFYLRLAKNTQVVLRYASWATLVVVNVSGIVLTFM NIFQCSPVQAAWMSDFSQSSTCIPLLTEFICAAPVNIVTDLAILALPIPVLTSMRLPSRQKTILVLTFTLGIFVT IVDVVRIYYLQRAITDVPTGTSSDPESRFGGQADFAWNASLSLMWSAVEVNVGMACACVPTLKPLILKLLPSMLY DPDGTRTSGESKGPSDSEMPLSRNRASVALPPPPPTAVALEPVRVDGEDVEAPVSAVDFFTAARTASLGSDPPRP TAGVATRARTNCTVSTNATAENGVYFGFVNIRKPKSMLKANAAESLKYCTIVSILFFLWGFSYGLLNTLNNAVAA VNRMTPAQTLGLTSAYFGGGYFFGPLLVGEWILRRDEHNRSKRHEKVDAENVGGFKVTFIVGLCIYGIGTIIFWP SAVTNSYGGFMLSSFVVGFGLSVLEVGANAFMILCGPPEYGEMRLLLAQGVQAVGSVLSGLLADKIFFKGIAQDN MSNSMTLINVQWTYLGITLLCVVLGLFFYYMPLPEVSDDELELSASQLPIDPKKRSLGGLQLRTVCLVLAVFAQY TYVAAQESNSIFFRELMVGILPSHPRRTTRAVVGVGRSSSAQDPDRPPGIAISIPDYLLVGHTVFALSRFLVGYL CYLSAKHPRLPQPRTYLTISVALSFLFALLPVVLRPANPDLLGVPVTLFFFAEGPTWPLIFAIGLRGQGLRTKRA AAFITMGGSGPAFFPFVMYGIISTGGSVRTAFIVIIALQVALVVYPLFLELSGDARRLVDPCSDVRRVLQDDERS VDEAVADRHRDHYKNNYGRRAREKTSGFFHRASRGLGAKFAAGSRKSSQQADAEHSEGSAASSPRPP* |
| Coding | >Hirsu2|4989 ATGGACGTCGATGCCAGTGGCTCGGATGCCCCAGCGCCAAATCGTGGGCCCGCCGTCTTCGCCGTCACGACCGCC ACGCTCGTCCTCTCGTCCGCCTTCGTCGGTGCCCGCATCGTCTGCCGCCACTTCGTCGTCCACAACGTCTCGTGG GATGACAGGGTTATGATCTTCGCCTGGCTCATCGCCTTCTTCCTCTCCTTCACCATCGATCTCGGCACCGTCAAC GGCCTGGGCAAGCACGACGCCGACATCTCCCAGCACGACCTGAGCACCTTGCGCCACTGCGAATATGTCTTCTCC ATCCTATACAACCCGGCCCTGATGGCCACCAAGACCAGCATCTTAATCTTCTATCTGCGCCTTGCCAAGAACACC CAGGTCGTCCTGCGCTACGCCTCGTGGGCCACTCTGGTCGTCGTCAACGTGTCCGGAATCGTCCTGACCTTTATG AACATCTTCCAATGTAGCCCCGTCCAGGCCGCCTGGATGTCCGACTTCTCCCAGAGCTCGACGTGCATCCCGCTT CTTACCGAGTTCATATGCGCCGCCCCCGTCAACATCGTCACCGACCTGGCCATCCTCGCCCTGCCCATCCCCGTC CTTACCAGCATGCGTCTGCCGTCTCGGCAGAAGACGATCCTCGTCCTGACCTTCACGCTCGGCATCTTCGTCACC ATCGTCGACGTCGTCCGCATCTATTACCTCCAGCGCGCCATCACCGACGTGCCCACGGGGACCTCATCCGATCCC GAGTCGAGGTTCGGCGGCCAGGCCGATTTCGCCTGGAACGCCTCCCTGTCTCTCATGTGGAGCGCCGTCGAGGTC AACGTCGGCATGGCCTGCGCCTGCGTCCCGACCCTCAAGCCCCTGATCCTCAAGCTCCTGCCTTCCATGCTGTAC GACCCGGACGGCACCCGGACGAGCGGCGAGTCCAAGGGCCCGAGCGACTCCGAAATGCCCCTGTCGCGCAACCGA GCGAGCGTCGCCCTCCCGCCGCCCCCGCCCACTGCCGTTGCGCTCGAGCCGGTGCGGGTCGACGGGGAAGACGTC GAGGCGCCCGTCAGCGCCGTCGACTTCTTCACCGCCGCGCGCACCGCTTCCTTGGGGAGCGACCCGCCGCGGCCT ACCGCCGGCGTGGCGACTCGTGCCCGCACAAACTGCACCGTCTCCACCAACGCCACGGCCGAGAACGGAGTCTAC TTCGGCTTCGTCAATATCAGGAAGCCTAAGAGCATGCTCAAGGCCAATGCCGCAGAGTCCCTCAAGTACTGCACC ATCGTCTCCATCCTCTTCTTCCTCTGGGGCTTCTCGTACGGCCTGCTCAACACGCTCAACAATGCCGTCGCCGCC GTGAACCGGATGACGCCAGCCCAGACGCTCGGCTTGACGAGCGCCTACTTTGGCGGCGGCTACTTCTTCGGCCCC TTGCTGGTCGGCGAGTGGATCCTGCGCCGGGACGAGCACAACCGCTCGAAGCGCCACGAGAAGGTGGATGCCGAG AACGTGGGCGGCTTCAAAGTTACGTTCATCGTCGGCCTGTGCATCTACGGCATAGGCACCATCATCTTCTGGCCC TCGGCAGTGACCAACTCGTACGGCGGCTTCATGCTCAGCAGCTTCGTCGTCGGCTTCGGGCTCTCGGTGCTCGAG GTCGGCGCCAATGCCTTCATGATCCTCTGCGGCCCGCCCGAGTACGGCGAGATGCGACTCCTCCTGGCCCAGGGC GTGCAGGCCGTCGGCAGCGTCCTCAGCGGCCTGCTGGCGGACAAGATCTTCTTCAAGGGGATCGCCCAGGACAAC ATGTCGAACAGCATGACGCTCATCAACGTGCAGTGGACCTATCTGGGCATCACCCTGCTGTGCGTCGTCCTCGGC CTCTTCTTCTACTACATGCCCCTTCCCGAGGTCAGCGACGACGAGCTCGAGCTCTCGGCGAGCCAGCTGCCCATT GATCCGAAGAAACGGAGCCTCGGCGGCCTGCAGCTGCGGACCGTGTGCCTGGTGCTGGCTGTGTTCGCGCAGTAT ACCTACGTCGCGGCCCAGGAGAGCAACAGCATCTTCTTCCGAGAGCTGATGGTCGGCATCCTACCCAGCCATCCG CGGCGGACGACGCGCGCCGTCGTCGGCGTCGGCCGCTCGTCTTCCGCGCAGGACCCGGACAGGCCGCCGGGCATC GCCATCTCGATACCCGACTACCTCCTCGTGGGGCACACCGTCTTTGCCCTCTCGCGCTTTCTCGTCGGCTACCTC TGCTACCTCTCGGCCAAGCACCCTCGCCTGCCGCAGCCGCGGACCTACCTCACCATCAGCGTCGCCCTCAGCTTC CTTTTCGCCCTCCTCCCCGTCGTGCTGCGGCCCGCCAATCCCGATCTGCTCGGCGTGCCCGTCACCCTCTTCTTC TTCGCCGAGGGCCCCACCTGGCCGCTGATATTCGCCATCGGCCTGCGGGGCCAGGGCCTGCGAACGAAGCGTGCG GCCGCCTTCATCACCATGGGAGGGTCCGGGCCGGCCTTCTTCCCCTTCGTCATGTACGGCATCATCTCCACGGGC GGCTCCGTGCGGACGGCCTTCATCGTCATCATCGCCCTGCAAGTCGCCCTGGTCGTGTACCCGCTGTTCCTGGAG CTGAGCGGGGACGCGAGGCGGCTCGTCGACCCGTGCTCGGACGTGCGGCGCGTGCTGCAGGACGACGAGCGCTCG GTGGACGAGGCCGTCGCCGACAGGCACCGAGACCACTACAAAAACAACTACGGAAGGAGGGCGAGGGAGAAGACC AGCGGCTTCTTCCACAGGGCATCCCGGGGCCTGGGAGCCAAGTTTGCCGCGGGGTCGCGGAAGTCGTCGCAGCAG GCCGACGCGGAGCACAGCGAGGGCAGCGCCGCGAGCTCGCCACGACCGCCGTGA |
| Transcript | >Hirsu2|4989 ATGGACGTCGATGCCAGTGGCTCGGATGCCCCAGCGCCAAATCGTGGGCCCGCCGTCTTCGCCGTCACGACCGCC ACGCTCGTCCTCTCGTCCGCCTTCGTCGGTGCCCGCATCGTCTGCCGCCACTTCGTCGTCCACAACGTCTCGTGG GATGACAGGGTTATGATCTTCGCCTGGCTCATCGCCTTCTTCCTCTCCTTCACCATCGATCTCGGCACCGTCAAC GGCCTGGGCAAGCACGACGCCGACATCTCCCAGCACGACCTGAGCACCTTGCGCCACTGCGAATATGTCTTCTCC ATCCTATACAACCCGGCCCTGATGGCCACCAAGACCAGCATCTTAATCTTCTATCTGCGCCTTGCCAAGAACACC CAGGTCGTCCTGCGCTACGCCTCGTGGGCCACTCTGGTCGTCGTCAACGTGTCCGGAATCGTCCTGACCTTTATG AACATCTTCCAATGTAGCCCCGTCCAGGCCGCCTGGATGTCCGACTTCTCCCAGAGCTCGACGTGCATCCCGCTT CTTACCGAGTTCATATGCGCCGCCCCCGTCAACATCGTCACCGACCTGGCCATCCTCGCCCTGCCCATCCCCGTC CTTACCAGCATGCGTCTGCCGTCTCGGCAGAAGACGATCCTCGTCCTGACCTTCACGCTCGGCATCTTCGTCACC ATCGTCGACGTCGTCCGCATCTATTACCTCCAGCGCGCCATCACCGACGTGCCCACGGGGACCTCATCCGATCCC GAGTCGAGGTTCGGCGGCCAGGCCGATTTCGCCTGGAACGCCTCCCTGTCTCTCATGTGGAGCGCCGTCGAGGTC AACGTCGGCATGGCCTGCGCCTGCGTCCCGACCCTCAAGCCCCTGATCCTCAAGCTCCTGCCTTCCATGCTGTAC GACCCGGACGGCACCCGGACGAGCGGCGAGTCCAAGGGCCCGAGCGACTCCGAAATGCCCCTGTCGCGCAACCGA GCGAGCGTCGCCCTCCCGCCGCCCCCGCCCACTGCCGTTGCGCTCGAGCCGGTGCGGGTCGACGGGGAAGACGTC GAGGCGCCCGTCAGCGCCGTCGACTTCTTCACCGCCGCGCGCACCGCTTCCTTGGGGAGCGACCCGCCGCGGCCT ACCGCCGGCGTGGCGACTCGTGCCCGCACAAACTGCACCGTCTCCACCAACGCCACGGCCGAGAACGGAGTCTAC TTCGGCTTCGTCAATATCAGGAAGCCTAAGAGCATGCTCAAGGCCAATGCCGCAGAGTCCCTCAAGTACTGCACC ATCGTCTCCATCCTCTTCTTCCTCTGGGGCTTCTCGTACGGCCTGCTCAACACGCTCAACAATGCCGTCGCCGCC GTGAACCGGATGACGCCAGCCCAGACGCTCGGCTTGACGAGCGCCTACTTTGGCGGCGGCTACTTCTTCGGCCCC TTGCTGGTCGGCGAGTGGATCCTGCGCCGGGACGAGCACAACCGCTCGAAGCGCCACGAGAAGGTGGATGCCGAG AACGTGGGCGGCTTCAAAGTTACGTTCATCGTCGGCCTGTGCATCTACGGCATAGGCACCATCATCTTCTGGCCC TCGGCAGTGACCAACTCGTACGGCGGCTTCATGCTCAGCAGCTTCGTCGTCGGCTTCGGGCTCTCGGTGCTCGAG GTCGGCGCCAATGCCTTCATGATCCTCTGCGGCCCGCCCGAGTACGGCGAGATGCGACTCCTCCTGGCCCAGGGC GTGCAGGCCGTCGGCAGCGTCCTCAGCGGCCTGCTGGCGGACAAGATCTTCTTCAAGGGGATCGCCCAGGACAAC ATGTCGAACAGCATGACGCTCATCAACGTGCAGTGGACCTATCTGGGCATCACCCTGCTGTGCGTCGTCCTCGGC CTCTTCTTCTACTACATGCCCCTTCCCGAGGTCAGCGACGACGAGCTCGAGCTCTCGGCGAGCCAGCTGCCCATT GATCCGAAGAAACGGAGCCTCGGCGGCCTGCAGCTGCGGACCGTGTGCCTGGTGCTGGCTGTGTTCGCGCAGTAT ACCTACGTCGCGGCCCAGGAGAGCAACAGCATCTTCTTCCGAGAGCTGATGGTCGGCATCCTACCCAGCCATCCG CGGCGGACGACGCGCGCCGTCGTCGGCGTCGGCCGCTCGTCTTCCGCGCAGGACCCGGACAGGCCGCCGGGCATC GCCATCTCGATACCCGACTACCTCCTCGTGGGGCACACCGTCTTTGCCCTCTCGCGCTTTCTCGTCGGCTACCTC TGCTACCTCTCGGCCAAGCACCCTCGCCTGCCGCAGCCGCGGACCTACCTCACCATCAGCGTCGCCCTCAGCTTC CTTTTCGCCCTCCTCCCCGTCGTGCTGCGGCCCGCCAATCCCGATCTGCTCGGCGTGCCCGTCACCCTCTTCTTC TTCGCCGAGGGCCCCACCTGGCCGCTGATATTCGCCATCGGCCTGCGGGGCCAGGGCCTGCGAACGAAGCGTGCG GCCGCCTTCATCACCATGGGAGGGTCCGGGCCGGCCTTCTTCCCCTTCGTCATGTACGGCATCATCTCCACGGGC GGCTCCGTGCGGACGGCCTTCATCGTCATCATCGCCCTGCAAGTCGCCCTGGTCGTGTACCCGCTGTTCCTGGAG CTGAGCGGGGACGCGAGGCGGCTCGTCGACCCGTGCTCGGACGTGCGGCGCGTGCTGCAGGACGACGAGCGCTCG GTGGACGAGGCCGTCGCCGACAGGCACCGAGACCACTACAAAAACAACTACGGAAGGAGGGCGAGGGAGAAGACC AGCGGCTTCTTCCACAGGGCATCCCGGGGCCTGGGAGCCAAGTTTGCCGCGGGGTCGCGGAAGTCGTCGCAGCAG GCCGACGCGGAGCACAGCGAGGGCAGCGCCGCGAGCTCGCCACGACCGCCGTGA |
| Gene | >Hirsu2|4989 ATGGACGTCGATGCCAGTGGCTCGGATGCCCCAGCGCCAAATCGTGGGCCCGCCGTCTTCGCCGTCACGACCGCC ACGCTCGTCCTCTCGTCCGCCTTCGTCGGTGCCCGCATCGTCTGCCGCCACTTCGTCGTCCACAACGTCTCGTGG GATGACAGGGTTATGATCTTCGCCTGGCTCATCGCCTTCTTCCTCTCCTTCACCATCGATCTCGGCACCGTCAAC GGCCTGGGCAAGCACGACGCCGACATCTCCCAGCACGACCTGAGCACCTTGCGCCACTGCGAATATGTCTTCTCC ATCCTATACGTAAGTAGGCCAAGTCGCGCCCAGCCCCGGACGCGCCGCTGACGCCCTCGCACAGAACCCGGCCCT GATGGCCACCAAGACCAGCATCTTAATCTTCTATCTGCGCCTTGCCAAGAACACCCAGGTCGTCCTGCGCTACGC CTCGTGGGCCACTCTGGTCGTCGTCAACGTGTCCGGAATCGTCCTGACCTTTATGAACATCTTCCAATGTAGCCC CGTCCAGGCCGCCTGGATGTCCGACTTCTCCCAGAGCTCGACGTGCATCCCGCTTCTTACCGAGTTCATATGCGC CGCCCCCGTCAACATCGTCACCGACCTGGCCATCCTCGCCCTGCCCATCCCCGTCCTTACCAGCATGCGTCTGCC GTCTCGGCAGAAGACGATCCTCGTCCTGACCTTCACGCTCGGCATCTTCGTCACCATCGTCGACGTCGTCCGCAT CTATTACCTCCAGCGCGCCATCACCGACGTGCCCACGGGGACCTCATCCGATCCCGAGTCGAGGTTCGGCGGCCA GGCCGATTTCGCCTGGAACGCCTCCCTGTCTCTCATGTGGAGCGCCGTCGAGGTCAACGTCGGCATGGCCTGCGC CTGCGTCCCGACCCTCAAGCCCCTGATCCTCAAGCTCCTGCCTTCCATGCTGTACGACCCGGACGGCACCCGGAC GAGCGGCGAGTCCAAGGGCCCGAGCGACTCCGAAATGCCCCTGTCGCGCAACCGAGCGAGCGTCGCCCTCCCGCC GCCCCCGCCCACTGCCGTTGCGCTCGAGCCGGTGCGGGTCGACGGGGAAGACGTCGAGGCGCCCGTCAGCGCCGT CGACTTCTTCACCGCCGCGCGCACCGCTTCCTTGGGGAGCGACCCGCCGCGGCCTACCGCCGGCGTGGCGACTCG TGCCCGCACAAACTGCACCGTCTCCACCAACGCCACGGCCGAGAACGGAGTCTACTTCGGCTTCGTCAATATCAG GAAGCCTAAGAGCATGCTCAAGGCCAATGCCGCAGAGTCCCTCAAGTACTGCACCATCGTCTCCATCCTCTTCTT CCTCTGGGGCTTCTCGTACGGCCTGCTCAACACGCTCAACAATGCCGTCGCCGCCGTGAACCGGATGACGCCAGC CCAGACGCTCGGCTTGACGAGCGCCTACTTTGGCGGCGGCTACTTCTTCGGCCCCTTGCTGGTCGGCGAGTGGAT CCTGCGCCGGGACGAGCACAACCGCTCGAAGCGCCACGAGAAGGTGGATGCCGAGAACGTGGGCGGCTTCAAAGT TACGTTCATCGTCGGCCTGTGCATCTACGGCATAGGCACCATCATCTTCTGGCCCTCGGCAGTGACCAACTCGTA CGGCGGCTTCATGCTCAGCAGCTTCGTCGTCGGCTTCGGGCTCTCGGTGCTCGAGGTCGGCGCCAATGCCTTCAT GATCCTCTGCGGCCCGCCCGAGTACGGCGAGATGCGACTCCTCCTGGCCCAGGGCGTGCAGGCCGTCGGCAGCGT CCTCAGCGGCCTGCTGGCGGACAAGATCTTCTTCAAGGGGATCGCCCAGGACAACATGTCGAACAGCATGACGCT CATCAACGTGCAGTGGACCTATCTGGGCATCACCCTGCTGTGCGTCGTCCTCGGCCTCTTCTTCTACTACATGCC CCTTCCCGAGGTCAGCGACGACGAGCTCGAGCTCTCGGCGAGCCAGCTGCCCATTGATCCGAAGAAACGGAGCCT CGGCGGCCTGCAGCTGCGGACCGTGTGCCTGGTGCTGGCTGTGTTCGCGCAGTATACCTACGTCGCGGCCCAGGA GAGCAACAGCATCTTCTTCCGAGAGCTGATGGTCGGCATCCTACCCAGCCATCCGCGGCGGACGACGCGCGCCGT CGTCGGCGTCGGCCGCTCGTCTTCCGCGCAGGACCCGGACAGGCCGCCGGGCATCGCCATCTCGATACCCGACTA CCTCCTCGTGGGGCACACCGTCTTTGCCCTCTCGCGCTTTCTCGTCGGCTACCTCTGCTACCTCTCGGCCAAGCA CCCTCGCCTGCCGCAGCCGCGGACCTACCTCACCATCAGCGTCGCCCTCAGCTTCCTTTTCGCCCTCCTCCCCGT CGTGCTGCGGCCCGCCAATCCCGATCTGCTCGGCGTGCCCGTCACCCTCTTCTTCTTCGCCGAGGGCCCCACCTG GCCGCTGATATTCGCCATCGGCCTGCGGGGCCAGGGCCTGCGAACGAAGCGTGCGGCCGCCTTCATCACCATGGG AGGGTCCGGGCCGGCCTTCTTCCCCTTCGTCATGTACGGCATCATCTCCACGGGCGGCTCCGTGCGGACGGCCTT CATCGTCATCATCGCCCTGCAAGTCGCCCTGGTCGTGTACCCGCTGTTCCTGGAGCTGAGCGGGGACGCGAGGCG GCTCGTCGACCCGTGCTCGGACGTGCGGCGCGTGCTGCAGGACGACGAGCGCTCGGTGGACGAGGCCGTCGCCGA CAGGCACCGAGACCACTACAAAAACAACTACGGAAGGAGGGCGAGGGAGAAGACCAGCGGCTTCTTCCACAGGGC ATCCCGGGGCCTGGGAGCCAAGTTTGCCGCGGGGTCGCGGAAGTCGTCGCAGCAGGCCGACGCGGAGCACAGCGA GGGCAGCGCCGCGAGCTCGCCACGACCGCCGTGA |