© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|4970 |
| Gene name | |
| Location | Contig_25:16475..17468 |
| Strand | - |
| Gene length (bp) | 993 |
| Transcript length (bp) | 909 |
| Coding sequence length (bp) | 909 |
| Protein length (aa) | 303 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08241 | Methyltransf_11 | Methyltransferase domain | 3.2E-20 | 41 | 135 |
| PF13649 | Methyltransf_25 | Methyltransferase domain | 2.4E-17 | 41 | 131 |
| PF13847 | Methyltransf_31 | Methyltransferase domain | 4.2E-10 | 40 | 135 |
| PF08242 | Methyltransf_12 | Methyltransferase domain | 4.3E-08 | 41 | 133 |
| PF01209 | Ubie_methyltran | ubiE/COQ5 methyltransferase family | 5.9E-06 | 39 | 134 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P32643|TMT1_YEAST | Trans-aconitate 3-methyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TMT1 PE=1 SV=1 | 1 | 301 | 2.0E-35 |
| sp|A6ZRD1|TMT1_YEAS7 | Trans-aconitate 3-methyltransferase OS=Saccharomyces cerevisiae (strain YJM789) GN=TMT1 PE=3 SV=1 | 1 | 301 | 2.0E-35 |
| sp|P38892|CRG1_YEAST | Probable S-adenosylmethionine-dependent methyltransferase CRG1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CRG1 PE=1 SV=1 | 4 | 269 | 9.0E-30 |
| sp|Q55EX9|Y8948_DICDI | Putative methyltransferase DDB_G0268948 OS=Dictyostelium discoideum GN=DDB_G0268948 PE=1 SV=2 | 4 | 138 | 1.0E-17 |
| sp|O31474|YCGJ_BACSU | Uncharacterized methyltransferase YcgJ OS=Bacillus subtilis (strain 168) GN=ycgJ PE=1 SV=2 | 40 | 156 | 3.0E-11 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P32643|TMT1_YEAST | Trans-aconitate 3-methyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TMT1 PE=1 SV=1 | 1 | 301 | 2.0E-35 |
| sp|A6ZRD1|TMT1_YEAS7 | Trans-aconitate 3-methyltransferase OS=Saccharomyces cerevisiae (strain YJM789) GN=TMT1 PE=3 SV=1 | 1 | 301 | 2.0E-35 |
| sp|P38892|CRG1_YEAST | Probable S-adenosylmethionine-dependent methyltransferase CRG1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CRG1 PE=1 SV=1 | 4 | 269 | 9.0E-30 |
| sp|Q55EX9|Y8948_DICDI | Putative methyltransferase DDB_G0268948 OS=Dictyostelium discoideum GN=DDB_G0268948 PE=1 SV=2 | 4 | 138 | 1.0E-17 |
| sp|O31474|YCGJ_BACSU | Uncharacterized methyltransferase YcgJ OS=Bacillus subtilis (strain 168) GN=ycgJ PE=1 SV=2 | 40 | 156 | 3.0E-11 |
| sp|Q9UTA8|YL8A_SCHPO | Uncharacterized methyltransferase-like C25B8.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC25B8.10 PE=3 SV=1 | 11 | 156 | 7.0E-10 |
| sp|Q9UTA9|YL89_SCHPO | Uncharacterized methyltransferase C25B8.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC25B8.09 PE=3 SV=1 | 12 | 155 | 7.0E-10 |
| sp|P65349|Y3374_MYCBO | Uncharacterized methyltransferase Mb3374 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb3374 PE=3 SV=1 | 8 | 143 | 4.0E-08 |
| sp|P9WK01|Y3342_MYCTU | Uncharacterized methyltransferase Rv3342 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv3342 PE=1 SV=1 | 8 | 143 | 4.0E-08 |
| sp|P9WK00|Y3342_MYCTO | Uncharacterized methyltransferase MT3445 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT3445 PE=3 SV=1 | 8 | 143 | 4.0E-08 |
| sp|P74388|BQMT_SYNY3 | 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0418 PE=1 SV=1 | 36 | 141 | 7.0E-06 |
| sp|Q8EDK8|BIOC_SHEON | Malonyl-[acyl-carrier protein] O-methyltransferase OS=Shewanella oneidensis (strain MR-1) GN=bioC PE=3 SV=1 | 37 | 131 | 8.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008168 | methyltransferase activity | Yes |
| GO:0016740 | transferase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| GO:0016741 | transferase activity, transferring one-carbon groups | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | Nuclear localization signal|Nuclear export signal | 0.792 | 0.6273 | 0.1322 | 0.0413 | 0.099 | 0.0046 | 0.0156 | 0.1229 | 0.1584 | 0.015 |
| Orthofinder run ID | 4 |
| Orthogroup | 2946 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|4970 MSVFGRASFSAAGYAAARPSYPASLFRTVLGHHRGPKGFLLDLGCGHGIAAREMSPHFGRVMGIDRSAGMIQQAS SMTAGEANISFRQGGAEDLSFLADGSVDMVVAGQAAHWFDYSKAWPELARVVRRGGSLAFWGYKDNVLVGHARAN EVLDRFCYAEGEVAPGVEGMQRYWEQPGRERVRQLLRAVEPPAAAWKDVERIEYDVQMDAASAPDAERAWMRKRI NLGGLEAYLRTFSAFQGWRDAHPQARSRAEEGEGDLADMMMEAIVASEPQWQAMGDRWREAEVETVWGTYILLAR RS* |
| Coding | >Hirsu2|4970 ATGTCCGTCTTTGGGAGAGCAAGCTTCTCGGCTGCGGGCTACGCGGCTGCGCGGCCATCCTATCCAGCCAGCCTG TTCAGGACGGTGCTCGGCCATCACCGCGGGCCCAAAGGCTTCCTGCTCGACCTGGGCTGCGGCCACGGCATAGCG GCGCGAGAGATGAGCCCCCACTTCGGCAGGGTCATGGGCATCGACAGGAGCGCGGGCATGATCCAGCAAGCCTCG TCGATGACGGCGGGCGAGGCCAACATCAGCTTCCGGCAGGGAGGCGCCGAGGACCTCTCCTTTCTGGCCGACGGC TCGGTCGACATGGTGGTGGCGGGCCAGGCGGCGCACTGGTTCGACTATTCCAAGGCCTGGCCCGAGCTGGCGCGC GTCGTCCGGCGCGGAGGCTCGCTCGCCTTCTGGGGATACAAGGACAACGTGCTGGTGGGGCACGCGCGGGCCAAC GAGGTGCTGGACCGATTCTGCTACGCCGAGGGCGAGGTCGCGCCGGGCGTCGAGGGCATGCAGCGGTACTGGGAG CAGCCGGGGCGCGAGCGGGTGCGCCAGCTGCTGCGGGCCGTCGAGCCGCCGGCGGCGGCGTGGAAGGACGTCGAG CGGATCGAGTATGACGTGCAGATGGACGCCGCGAGCGCGCCGGACGCGGAAAGGGCCTGGATGAGGAAGCGCATC AACCTGGGCGGGCTCGAGGCCTACCTGCGGACCTTCAGCGCCTTCCAGGGCTGGCGAGACGCGCACCCGCAGGCG AGGAGCCGGGCGGAAGAGGGCGAGGGCGACCTGGCAGACATGATGATGGAGGCCATCGTCGCGTCGGAGCCGCAG TGGCAGGCCATGGGGGATCGCTGGAGGGAGGCCGAGGTCGAGACGGTCTGGGGCACGTACATTTTGCTGGCGAGG AGGAGTTGA |
| Transcript | >Hirsu2|4970 ATGTCCGTCTTTGGGAGAGCAAGCTTCTCGGCTGCGGGCTACGCGGCTGCGCGGCCATCCTATCCAGCCAGCCTG TTCAGGACGGTGCTCGGCCATCACCGCGGGCCCAAAGGCTTCCTGCTCGACCTGGGCTGCGGCCACGGCATAGCG GCGCGAGAGATGAGCCCCCACTTCGGCAGGGTCATGGGCATCGACAGGAGCGCGGGCATGATCCAGCAAGCCTCG TCGATGACGGCGGGCGAGGCCAACATCAGCTTCCGGCAGGGAGGCGCCGAGGACCTCTCCTTTCTGGCCGACGGC TCGGTCGACATGGTGGTGGCGGGCCAGGCGGCGCACTGGTTCGACTATTCCAAGGCCTGGCCCGAGCTGGCGCGC GTCGTCCGGCGCGGAGGCTCGCTCGCCTTCTGGGGATACAAGGACAACGTGCTGGTGGGGCACGCGCGGGCCAAC GAGGTGCTGGACCGATTCTGCTACGCCGAGGGCGAGGTCGCGCCGGGCGTCGAGGGCATGCAGCGGTACTGGGAG CAGCCGGGGCGCGAGCGGGTGCGCCAGCTGCTGCGGGCCGTCGAGCCGCCGGCGGCGGCGTGGAAGGACGTCGAG CGGATCGAGTATGACGTGCAGATGGACGCCGCGAGCGCGCCGGACGCGGAAAGGGCCTGGATGAGGAAGCGCATC AACCTGGGCGGGCTCGAGGCCTACCTGCGGACCTTCAGCGCCTTCCAGGGCTGGCGAGACGCGCACCCGCAGGCG AGGAGCCGGGCGGAAGAGGGCGAGGGCGACCTGGCAGACATGATGATGGAGGCCATCGTCGCGTCGGAGCCGCAG TGGCAGGCCATGGGGGATCGCTGGAGGGAGGCCGAGGTCGAGACGGTCTGGGGCACGTACATTTTGCTGGCGAGG AGGAGTTGA |
| Gene | >Hirsu2|4970 ATGTCCGTCTTTGGGTGCGTCATGGGCCGGTCGGGCTTGTCACAACGACGAAATGCACGAATCCACACGAGACGA GGGCGCTGACTTGTGAGGTGCAGGAGAGCAAGCTTCTCGGCTGCGGGCTACGCGGCTGCGCGGCCATCCTATCCA GCCAGCCTGTTCAGGACGGTGCTCGGCCATCACCGCGGGCCCAAAGGCTTCCTGCTCGACCTGGGCTGCGGCCAC GGCATAGCGGCGCGAGAGATGAGCCCCCACTTCGGCAGGGTCATGGGCATCGACAGGAGCGCGGGCATGATCCAG CAAGCCTCGTCGATGACGGCGGGCGAGGCCAACATCAGCTTCCGGCAGGGAGGCGCCGAGGACCTCTCCTTTCTG GCCGACGGCTCGGTCGACATGGTGGTGGCGGGCCAGGCGGCGCACTGGTTCGACTATTCCAAGGCCTGGCCCGAG CTGGCGCGCGTCGTCCGGCGCGGAGGCTCGCTCGCCTTCTGGGGATACAAGGACAACGTGCTGGTGGGGCACGCG CGGGCCAACGAGGTGCTGGACCGATTCTGCTACGCCGAGGGCGAGGTCGCGCCGGGCGTCGAGGGCATGCAGCGG TACTGGGAGCAGCCGGGGCGCGAGCGGGTGCGCCAGCTGCTGCGGGCCGTCGAGCCGCCGGCGGCGGCGTGGAAG GACGTCGAGCGGATCGAGTATGACGTGCAGATGGACGCCGCGAGCGCGCCGGACGCGGAAAGGGCCTGGATGAGG AAGCGCATCAACCTGGGCGGGCTCGAGGCCTACCTGCGGACCTTCAGCGCCTTCCAGGGCTGGCGAGACGCGCAC CCGCAGGCGAGGAGCCGGGCGGAAGAGGGCGAGGGCGACCTGGCAGACATGATGATGGAGGCCATCGTCGCGTCG GAGCCGCAGTGGCAGGCCATGGGGGATCGCTGGAGGGAGGCCGAGGTCGAGACGGTCTGGGGCACGTACATTTTG CTGGCGAGGAGGAGTTGA |