Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4949
Gene name
LocationContig_249:19476..19890
Strand-
Gene length (bp)414
Transcript length (bp)354
Coding sequence length (bp)354
Protein length (aa) 118

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.0822 0.0378 0.9834 0.0509 0.0837 0.0188 0.197 0.0888 0.0935 0.0037

SignalP

SignalP signal predicted Location Score
Yes 1 - 22 0.999736

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6494
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis map64 (Brazil) OphauB2|4897
Ophiocordyceps subramaniannii Hirsu2|10537
Ophiocordyceps subramaniannii Hirsu2|1956
Ophiocordyceps subramaniannii Hirsu2|4949 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4949
MVRPSFTVLSLFAAAAFAVAAAVPAEGDVQNREEGMAITKESVQRMVKEFEDSKSPEQKRKAKEISLATEAEHGG
KENPAVIRMVQEEEVMMSEKQREKGRAIVNAILELTKADQRG*
Coding >Hirsu2|4949
ATGGTTCGTCCCAGCTTCACCGTCTTGTCTCTTTTCGCCGCCGCCGCCTTCGCCGTGGCTGCCGCCGTCCCAGCT
GAGGGTGACGTCCAGAACAGGGAGGAGGGCATGGCGATCACCAAGGAGAGCGTCCAGAGGATGGTCAAGGAATTC
GAAGACTCCAAGTCGCCGGAGCAGAAGAGGAAGGCGAAGGAGATAAGCTTGGCGACCGAGGCGGAGCACGGGGGA
AAGGAGAACCCGGCCGTGATTCGGATGGTTCAGGAGGAGGAGGTGATGATGAGCGAGAAGCAGAGGGAAAAGGGG
AGGGCTATCGTCAACGCCATCCTCGAGTTGACCAAGGCTGATCAGCGCGGATAG
Transcript >Hirsu2|4949
ATGGTTCGTCCCAGCTTCACCGTCTTGTCTCTTTTCGCCGCCGCCGCCTTCGCCGTGGCTGCCGCCGTCCCAGCT
GAGGGTGACGTCCAGAACAGGGAGGAGGGCATGGCGATCACCAAGGAGAGCGTCCAGAGGATGGTCAAGGAATTC
GAAGACTCCAAGTCGCCGGAGCAGAAGAGGAAGGCGAAGGAGATAAGCTTGGCGACCGAGGCGGAGCACGGGGGA
AAGGAGAACCCGGCCGTGATTCGGATGGTTCAGGAGGAGGAGGTGATGATGAGCGAGAAGCAGAGGGAAAAGGGG
AGGGCTATCGTCAACGCCATCCTCGAGTTGACCAAGGCTGATCAGCGCGGATAG
Gene >Hirsu2|4949
ATGGTTCGTCCCAGCTTCACCGTCTTGTCTCGTACGTTTCGCCCTCTGCTCCTCCCTAGGCCATATCGCTATCAT
GGACTTACTTGATCAGTTTTCGCCGCCGCCGCCTTCGCCGTGGCTGCCGCCGTCCCAGCTGAGGGTGACGTCCAG
AACAGGGAGGAGGGCATGGCGATCACCAAGGAGAGCGTCCAGAGGATGGTCAAGGAATTCGAAGACTCCAAGTCG
CCGGAGCAGAAGAGGAAGGCGAAGGAGATAAGCTTGGCGACCGAGGCGGAGCACGGGGGAAAGGAGAACCCGGCC
GTGATTCGGATGGTTCAGGAGGAGGAGGTGATGATGAGCGAGAAGCAGAGGGAAAAGGGGAGGGCTATCGTCAAC
GCCATCCTCGAGTTGACCAAGGCTGATCAGCGCGGATAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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