Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4938
Gene name
LocationContig_2484:1744..2096
Strand+
Gene length (bp)352
Transcript length (bp)291
Coding sequence length (bp)291
Protein length (aa) 97

Overview

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q8WZY3|YBG3_NEUCR Uncharacterized protein B24G3.190 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=B24G3.190 PE=3 SV=1 1 95 7.0E-15
sp|P38841|YHT8_YEAST Uncharacterized protein YHR138C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YHR138C PE=1 SV=1 1 69 2.0E-07

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1039 0.0427 0.9756 0.1079 0.1201 0.0107 0.1061 0.1112 0.0319 0.0026

SignalP

SignalP signal predicted Location Score
Yes 1 - 19 0.999664

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup855
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|396
Ophiocordyceps australis map64 (Brazil) OphauB2|7319
Ophiocordyceps australis map64 (Brazil) OphauB2|8153
Ophiocordyceps camponoti-floridani Ophcf2|04237
Ophiocordyceps camponoti-rufipedis Ophun1|1499
Ophiocordyceps subramaniannii Hirsu2|4668
Ophiocordyceps subramaniannii Hirsu2|4938 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4938
MKFAYCFIVAIAAISGSTAVDQKKSAIVSFDDPATPEAIVDRVKEDLVKAGGRITHEYNLIKGFAVVAPGKALEN
AQLLTDTYRMRIEEDETVNSQ*
Coding >Hirsu2|4938
ATGAAATTTGCCTACTGCTTCATAGTGGCGATTGCCGCTATTTCGGGCTCGACGGCGGTCGACCAGAAAAAGTCG
GCTATCGTCTCTTTTGACGATCCTGCCACCCCCGAGGCTATTGTTGATCGGGTCAAGGAAGACCTTGTCAAAGCT
GGTGGCCGGATTACTCACGAATACAACCTTATTAAGGGTTTCGCCGTTGTCGCCCCGGGAAAAGCCCTGGAAAAC
GCTCAGCTTCTGACTGATACTTATCGGATGCGCATTGAAGAGGACGAAACTGTGAACAGTCAGTAA
Transcript >Hirsu2|4938
ATGAAATTTGCCTACTGCTTCATAGTGGCGATTGCCGCTATTTCGGGCTCGACGGCGGTCGACCAGAAAAAGTCG
GCTATCGTCTCTTTTGACGATCCTGCCACCCCCGAGGCTATTGTTGATCGGGTCAAGGAAGACCTTGTCAAAGCT
GGTGGCCGGATTACTCACGAATACAACCTTATTAAGGGTTTCGCCGTTGTCGCCCCGGGAAAAGCCCTGGAAAAC
GCTCAGCTTCTGACTGATACTTATCGGATGCGCATTGAAGAGGACGAAACTGTGAACAGTCAGTAA
Gene >Hirsu2|4938
ATGAAATTTGCCTACTGCTTCATAGTGGCGATTGCCGCTATTTCGGGCTCGACGGCGGTCGACCAGAAAAAGTCG
GCTATCGTCTCTTTTGACGATCCTGCCACCCCCGAGGCTATTGTTGATCGGGTCAAGGAAGACCTTGTCAAAGCT
GGTGGCCGGATTACTCACGAATACAACCTTATTAAGTTCGCACGCTCTATCACTTCTATCCCACCCCTAATTTAC
TTCCCGCTAACTGTCCGCCAGGGGTTTCGCCGTTGTCGCCCCGGGAAAAGCCCTGGAAAACGCTCAGCTTCTGAC
TGATACTTATCGGATGCGCATTGAAGAGGACGAAACTGTGAACAGTCAGTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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