Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4904
Gene name
LocationContig_247:9781..10474
Strand+
Gene length (bp)693
Transcript length (bp)522
Coding sequence length (bp)522
Protein length (aa) 174

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.2049 0.1454 0.7943 0.2012 0.2529 0.0848 0.3434 0.23 0.2263 0.02

SignalP

SignalP signal predicted Location Score
Yes 1 - 24 0.9993

Transmembrane Domains

Domain # Start End Length
1 7 29 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup9748
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|4904 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4904
MSCRRLSIIILSTALALWAGRCLALPAAADCLAKFDLSERSNPQLWEALLQASRKGTDDVVECILSQRRVNVNVL
GSLGDSALLRAVARRHESTARLLLRDGLANPDPKLKYGITPMKLAQEAGLANMVFLLRLWGQANENFWGYFNDPT
LCSFLRYGHILRGHLKLTTTLQL*
Coding >Hirsu2|4904
ATGTCGTGCCGTCGCCTCTCCATCATCATTCTGTCGACAGCCCTGGCTTTGTGGGCTGGCCGGTGTCTGGCCCTG
CCCGCGGCCGCCGACTGCCTTGCCAAGTTCGACTTGTCTGAACGCTCCAACCCCCAGCTCTGGGAAGCCCTACTA
CAAGCCTCGAGGAAGGGCACCGACGACGTGGTCGAATGTATACTGTCCCAGCGCCGTGTGAACGTCAACGTTCTC
GGCAGCCTCGGCGACTCGGCGCTGCTGCGGGCCGTCGCCCGGCGCCACGAGTCTACCGCCAGGCTGCTGCTGCGC
GACGGGCTCGCCAACCCCGACCCCAAGCTGAAGTACGGCATCACGCCGATGAAGCTGGCCCAAGAGGCCGGACTC
GCCAACATGGTTTTCCTGCTTCGGCTCTGGGGCCAGGCCAACGAAAACTTCTGGGGCTACTTCAATGACCCGACT
TTGTGCTCTTTTTTGAGATATGGCCATATACTGCGTGGTCATCTTAAGCTGACGACGACTCTCCAACTTTAG
Transcript >Hirsu2|4904
ATGTCGTGCCGTCGCCTCTCCATCATCATTCTGTCGACAGCCCTGGCTTTGTGGGCTGGCCGGTGTCTGGCCCTG
CCCGCGGCCGCCGACTGCCTTGCCAAGTTCGACTTGTCTGAACGCTCCAACCCCCAGCTCTGGGAAGCCCTACTA
CAAGCCTCGAGGAAGGGCACCGACGACGTGGTCGAATGTATACTGTCCCAGCGCCGTGTGAACGTCAACGTTCTC
GGCAGCCTCGGCGACTCGGCGCTGCTGCGGGCCGTCGCCCGGCGCCACGAGTCTACCGCCAGGCTGCTGCTGCGC
GACGGGCTCGCCAACCCCGACCCCAAGCTGAAGTACGGCATCACGCCGATGAAGCTGGCCCAAGAGGCCGGACTC
GCCAACATGGTTTTCCTGCTTCGGCTCTGGGGCCAGGCCAACGAAAACTTCTGGGGCTACTTCAATGACCCGACT
TTGTGCTCTTTTTTGAGATATGGCCATATACTGCGTGGTCATCTTAAGCTGACGACGACTCTCCAACTTTAG
Gene >Hirsu2|4904
ATGTCGTGCCGTCGCCTCTCCATCATCATTCTGTCGACAGCCCTGGCTTTGTGGGCTGGCCGGTGTCTGGCCCTG
CCCGCGGCCGCCGACTGCCTTGCCAAGTTCGACTTGTCTGAACGCTCCAACCCCCAGCTCTGGGAAGCCCTACTA
CAAGCCTCGAGGAAGGGCACCGACGACGTGGTCGAATGTATACTGTCCCAGCGCCGTGTGAACGTCAACGTTCTC
GGCAGCCTCGGCGACTCGGCGCTGCTGCGGGCCGTCGCCCGGCGCCACGAGTCTACCGCCAGGCTGCTGCTGCGC
GACGGGCTCGCCAACCCCGACCCCAAGCTGAAGTACGGCATCACGCCGATGAAGCTGGCCCAAGAGGCCGGACTC
GCCAACATGGTTTTCCTGCTTCGGCTCTGGGGCCAGGCCAACGAAAACTTCTGGGGCTACTTCAATGACCCGACT
TTGTGCTCTTTTTTGAGATATGGCCATATACTGCGTGGTCATCTTAAGTGGGTTGGAGACGGATGCATTTGCAAA
GTTACACGCCCGGATTGGCTCTATCTCCTGCGAAACGACCCCCTGCATCGTCCCATCGGCCGGGGCGTCAGCCGT
GATGAAGCAACATGTGTAAGTCTATGTCGCTACCTTGGCCTCTTCTCAAGCCATTGCAATGCTCCGAGGCTGACG
ACGACTCTCCAACTTTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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