Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|49
Gene name
LocationContig_1003:1354..2377
Strand-
Gene length (bp)1023
Transcript length (bp)729
Coding sequence length (bp)729
Protein length (aa) 243

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 23 0.45

Transmembrane Domains

Domain # Start End Length
1 160 182 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|49
MGRFPPLLVGALSALHILGATAQAPQPPPTPQASGCILACTNQLKAKFQDFNCKNADDAGCLCKNQNFGFGLLCG
PSSCAVQRSDPGKGRTGIIPVAPSDECSTFRDPHLHSRRARHNTAVVNKLSGPCRDGHCPRFVHLCDVCFLRNIR
FPDQHHHSTVVGIGLGVGGAVIALASIGVGLLLRGRKRKPRPSMEISKPLPGSGRTYGGRGANSFEKYGNDIEMT
TNRYEDMVPRQQPRTMV*
Coding >Hirsu2|49
ATGGGCCGCTTCCCGCCGCTGCTCGTCGGAGCCTTGAGCGCCTTGCACATCCTGGGAGCCACGGCCCAGGCGCCT
CAGCCACCGCCGACACCGCAGGCGTCAGGATGCATCCTCGCATGCACCAACCAGCTCAAGGCCAAATTTCAAGAC
TTCAACTGCAAGAACGCCGACGATGCTGGCTGCCTGTGCAAAAACCAGAACTTTGGCTTCGGCCTTTTGTGCGGG
CCATCTTCCTGCGCAGTCCAGCGCTCCGACCCGGGAAAAGGCCGCACCGGCATCATCCCAGTCGCCCCATCCGAC
GAATGCTCAACCTTCCGCGACCCCCACCTCCATTCAAGGCGCGCCCGCCACAACACGGCCGTCGTCAACAAGCTC
AGCGGCCCATGTCGCGACGGGCACTGCCCCCGCTTCGTCCACCTCTGCGACGTCTGCTTCCTCCGCAACATCCGA
TTCCCCGATCAGCACCACCACTCCACCGTGGTCGGAATCGGGCTCGGCGTCGGAGGGGCTGTCATTGCCCTCGCC
AGCATAGGCGTTGGCCTCCTGCTGAGAGGCCGCAAGCGAAAGCCGCGTCCGTCGATGGAGATTTCGAAGCCACTT
CCCGGCTCGGGCAGAACCTATGGCGGCCGTGGGGCAAACTCGTTTGAGAAGTACGGCAACGACATTGAGATGACG
ACGAACCGTTACGAGGACATGGTGCCCCGTCAGCAGCCTCGGACCATGGTTTGA
Transcript >Hirsu2|49
ATGGGCCGCTTCCCGCCGCTGCTCGTCGGAGCCTTGAGCGCCTTGCACATCCTGGGAGCCACGGCCCAGGCGCCT
CAGCCACCGCCGACACCGCAGGCGTCAGGATGCATCCTCGCATGCACCAACCAGCTCAAGGCCAAATTTCAAGAC
TTCAACTGCAAGAACGCCGACGATGCTGGCTGCCTGTGCAAAAACCAGAACTTTGGCTTCGGCCTTTTGTGCGGG
CCATCTTCCTGCGCAGTCCAGCGCTCCGACCCGGGAAAAGGCCGCACCGGCATCATCCCAGTCGCCCCATCCGAC
GAATGCTCAACCTTCCGCGACCCCCACCTCCATTCAAGGCGCGCCCGCCACAACACGGCCGTCGTCAACAAGCTC
AGCGGCCCATGTCGCGACGGGCACTGCCCCCGCTTCGTCCACCTCTGCGACGTCTGCTTCCTCCGCAACATCCGA
TTCCCCGATCAGCACCACCACTCCACCGTGGTCGGAATCGGGCTCGGCGTCGGAGGGGCTGTCATTGCCCTCGCC
AGCATAGGCGTTGGCCTCCTGCTGAGAGGCCGCAAGCGAAAGCCGCGTCCGTCGATGGAGATTTCGAAGCCACTT
CCCGGCTCGGGCAGAACCTATGGCGGCCGTGGGGCAAACTCGTTTGAGAAGTACGGCAACGACATTGAGATGACG
ACGAACCGTTACGAGGACATGGTGCCCCGTCAGCAGCCTCGGACCATGGTTTGA
Gene >Hirsu2|49
ATGGGCCGCTTCCCGCCGCTGCTCGTCGGAGCCTTGAGCGCCTTGCACATCCTGGGAGCCACGGCCCAGGCGCCT
CAGCCACCGCCGACACCGCAGGCGTCAGGATGCATCGTACGTTGTCGACGTCGGATGCTGGTAGCACCATATGCT
GACCCTGACCCTCCAGCTCGCATGCACCAACCAGCTCAAGGCCAAATTTCAAGACTTCAACTGCAAGAACGCCGA
CGATGCTGGCTGCCTGTGCAAAAACCAGAACTTTGGCTTCGGCGTACGTGATTGCAGCGCCAACTGCATCACCGA
CAAATCAGCCAAGGTTGACCTGTTTCCCGCCGGAAGCTTTTGTGCGGGTGAGTATGCCCTGCCAAGCCGAGACCC
CCAGCTTGAGTCTGACTGCCGGCACTCCAGGCCATCTTCCTGCGCAGTCCAGCGCTCCGACCCGGGAAAAGGCCG
CACCGGCATCATCCCAGTCGCCCCATCCGACGAATGCTCAACCTTCCGCGACCCCCACCTCCATTCAAGGCGCGC
CCGCCACAACACGGCCGTCGTCAACAAGCTCAGCGGCCCATGTCGCGACGGGCACTGCCCCCGCTTCGTCCACCG
TGAGTGCACTTGATACGAGTTTTCAGACGAGGGCCGAGATGCCACTGACACGACGGGAACACCTAGTCTGCGACG
TCTGCTTCCTCCGCAACATCCGATTCCCCGATCAGCACCACCACGTCGGCTGCCGCAGCAAGCGACTCCGCCGGC
TCCGGCTTACCCCAGTCCACCGTGGTCGGAATCGGGCTCGGCGTCGGAGGGGCTGTCATTGCCCTCGCCAGCATA
GGCGTTGGCCTCCTGCTGAGAGGCCGCAAGCGAAAGCCGCGTCCGTCGATGGAGATTTCGAAGCCACTTCCCGGC
TCGGGCAGAACCTATGGCGGCCGTGGGGCAAACTCGTTTGAGAAGTACGGCAACGACATTGAGATGACGACGAAC
CGTTACGAGGACATGGTGCCCCGTCAGCAGCCTCGGACCATGGTTTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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