Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|49
Gene name
LocationContig_1003:1354..2377
Strand-
Gene length (bp)1023
Transcript length (bp)729
Coding sequence length (bp)729
Protein length (aa) 243

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1491 0.1496 0.5633 0.4605 0.2181 0.0228 0.0974 0.3148 0.1708 0.0591

SignalP

SignalP signal predicted Location Score
Yes 1 - 22 0.999777

Transmembrane Domains

Domain # Start End Length
1 160 182 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2920
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6355
Ophiocordyceps australis map64 (Brazil) OphauB2|102
Ophiocordyceps camponoti-floridani Ophcf2|00900
Ophiocordyceps camponoti-rufipedis Ophun1|5143
Ophiocordyceps kimflemingae Ophio5|731
Ophiocordyceps subramaniannii Hirsu2|49 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|49
MGRFPPLLVGALSALHILGATAQAPQPPPTPQASGCILACTNQLKAKFQDFNCKNADDAGCLCKNQNFGFGLLCG
PSSCAVQRSDPGKGRTGIIPVAPSDECSTFRDPHLHSRRARHNTAVVNKLSGPCRDGHCPRFVHLCDVCFLRNIR
FPDQHHHSTVVGIGLGVGGAVIALASIGVGLLLRGRKRKPRPSMEISKPLPGSGRTYGGRGANSFEKYGNDIEMT
TNRYEDMVPRQQPRTMV*
Coding >Hirsu2|49
ATGGGCCGCTTCCCGCCGCTGCTCGTCGGAGCCTTGAGCGCCTTGCACATCCTGGGAGCCACGGCCCAGGCGCCT
CAGCCACCGCCGACACCGCAGGCGTCAGGATGCATCCTCGCATGCACCAACCAGCTCAAGGCCAAATTTCAAGAC
TTCAACTGCAAGAACGCCGACGATGCTGGCTGCCTGTGCAAAAACCAGAACTTTGGCTTCGGCCTTTTGTGCGGG
CCATCTTCCTGCGCAGTCCAGCGCTCCGACCCGGGAAAAGGCCGCACCGGCATCATCCCAGTCGCCCCATCCGAC
GAATGCTCAACCTTCCGCGACCCCCACCTCCATTCAAGGCGCGCCCGCCACAACACGGCCGTCGTCAACAAGCTC
AGCGGCCCATGTCGCGACGGGCACTGCCCCCGCTTCGTCCACCTCTGCGACGTCTGCTTCCTCCGCAACATCCGA
TTCCCCGATCAGCACCACCACTCCACCGTGGTCGGAATCGGGCTCGGCGTCGGAGGGGCTGTCATTGCCCTCGCC
AGCATAGGCGTTGGCCTCCTGCTGAGAGGCCGCAAGCGAAAGCCGCGTCCGTCGATGGAGATTTCGAAGCCACTT
CCCGGCTCGGGCAGAACCTATGGCGGCCGTGGGGCAAACTCGTTTGAGAAGTACGGCAACGACATTGAGATGACG
ACGAACCGTTACGAGGACATGGTGCCCCGTCAGCAGCCTCGGACCATGGTTTGA
Transcript >Hirsu2|49
ATGGGCCGCTTCCCGCCGCTGCTCGTCGGAGCCTTGAGCGCCTTGCACATCCTGGGAGCCACGGCCCAGGCGCCT
CAGCCACCGCCGACACCGCAGGCGTCAGGATGCATCCTCGCATGCACCAACCAGCTCAAGGCCAAATTTCAAGAC
TTCAACTGCAAGAACGCCGACGATGCTGGCTGCCTGTGCAAAAACCAGAACTTTGGCTTCGGCCTTTTGTGCGGG
CCATCTTCCTGCGCAGTCCAGCGCTCCGACCCGGGAAAAGGCCGCACCGGCATCATCCCAGTCGCCCCATCCGAC
GAATGCTCAACCTTCCGCGACCCCCACCTCCATTCAAGGCGCGCCCGCCACAACACGGCCGTCGTCAACAAGCTC
AGCGGCCCATGTCGCGACGGGCACTGCCCCCGCTTCGTCCACCTCTGCGACGTCTGCTTCCTCCGCAACATCCGA
TTCCCCGATCAGCACCACCACTCCACCGTGGTCGGAATCGGGCTCGGCGTCGGAGGGGCTGTCATTGCCCTCGCC
AGCATAGGCGTTGGCCTCCTGCTGAGAGGCCGCAAGCGAAAGCCGCGTCCGTCGATGGAGATTTCGAAGCCACTT
CCCGGCTCGGGCAGAACCTATGGCGGCCGTGGGGCAAACTCGTTTGAGAAGTACGGCAACGACATTGAGATGACG
ACGAACCGTTACGAGGACATGGTGCCCCGTCAGCAGCCTCGGACCATGGTTTGA
Gene >Hirsu2|49
ATGGGCCGCTTCCCGCCGCTGCTCGTCGGAGCCTTGAGCGCCTTGCACATCCTGGGAGCCACGGCCCAGGCGCCT
CAGCCACCGCCGACACCGCAGGCGTCAGGATGCATCGTACGTTGTCGACGTCGGATGCTGGTAGCACCATATGCT
GACCCTGACCCTCCAGCTCGCATGCACCAACCAGCTCAAGGCCAAATTTCAAGACTTCAACTGCAAGAACGCCGA
CGATGCTGGCTGCCTGTGCAAAAACCAGAACTTTGGCTTCGGCGTACGTGATTGCAGCGCCAACTGCATCACCGA
CAAATCAGCCAAGGTTGACCTGTTTCCCGCCGGAAGCTTTTGTGCGGGTGAGTATGCCCTGCCAAGCCGAGACCC
CCAGCTTGAGTCTGACTGCCGGCACTCCAGGCCATCTTCCTGCGCAGTCCAGCGCTCCGACCCGGGAAAAGGCCG
CACCGGCATCATCCCAGTCGCCCCATCCGACGAATGCTCAACCTTCCGCGACCCCCACCTCCATTCAAGGCGCGC
CCGCCACAACACGGCCGTCGTCAACAAGCTCAGCGGCCCATGTCGCGACGGGCACTGCCCCCGCTTCGTCCACCG
TGAGTGCACTTGATACGAGTTTTCAGACGAGGGCCGAGATGCCACTGACACGACGGGAACACCTAGTCTGCGACG
TCTGCTTCCTCCGCAACATCCGATTCCCCGATCAGCACCACCACGTCGGCTGCCGCAGCAAGCGACTCCGCCGGC
TCCGGCTTACCCCAGTCCACCGTGGTCGGAATCGGGCTCGGCGTCGGAGGGGCTGTCATTGCCCTCGCCAGCATA
GGCGTTGGCCTCCTGCTGAGAGGCCGCAAGCGAAAGCCGCGTCCGTCGATGGAGATTTCGAAGCCACTTCCCGGC
TCGGGCAGAACCTATGGCGGCCGTGGGGCAAACTCGTTTGAGAAGTACGGCAACGACATTGAGATGACGACGAAC
CGTTACGAGGACATGGTGCCCCGTCAGCAGCCTCGGACCATGGTTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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