Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|49
Gene name
Location	Contig_1003:1354..2377
Strand	-
Gene length (bp)	1023
Transcript length (bp)	729
Coding sequence length (bp)	729
Protein length (aa)	243

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 23	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	160	182	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|49 MGRFPPLLVGALSALHILGATAQAPQPPPTPQASGCILACTNQLKAKFQDFNCKNADDAGCLCKNQNFGFGLLCG PSSCAVQRSDPGKGRTGIIPVAPSDECSTFRDPHLHSRRARHNTAVVNKLSGPCRDGHCPRFVHLCDVCFLRNIR FPDQHHHSTVVGIGLGVGGAVIALASIGVGLLLRGRKRKPRPSMEISKPLPGSGRTYGGRGANSFEKYGNDIEMT TNRYEDMVPRQQPRTMV*
Coding	>Hirsu2\|49 ATGGGCCGCTTCCCGCCGCTGCTCGTCGGAGCCTTGAGCGCCTTGCACATCCTGGGAGCCACGGCCCAGGCGCCT CAGCCACCGCCGACACCGCAGGCGTCAGGATGCATCCTCGCATGCACCAACCAGCTCAAGGCCAAATTTCAAGAC TTCAACTGCAAGAACGCCGACGATGCTGGCTGCCTGTGCAAAAACCAGAACTTTGGCTTCGGCCTTTTGTGCGGG CCATCTTCCTGCGCAGTCCAGCGCTCCGACCCGGGAAAAGGCCGCACCGGCATCATCCCAGTCGCCCCATCCGAC GAATGCTCAACCTTCCGCGACCCCCACCTCCATTCAAGGCGCGCCCGCCACAACACGGCCGTCGTCAACAAGCTC AGCGGCCCATGTCGCGACGGGCACTGCCCCCGCTTCGTCCACCTCTGCGACGTCTGCTTCCTCCGCAACATCCGA TTCCCCGATCAGCACCACCACTCCACCGTGGTCGGAATCGGGCTCGGCGTCGGAGGGGCTGTCATTGCCCTCGCC AGCATAGGCGTTGGCCTCCTGCTGAGAGGCCGCAAGCGAAAGCCGCGTCCGTCGATGGAGATTTCGAAGCCACTT CCCGGCTCGGGCAGAACCTATGGCGGCCGTGGGGCAAACTCGTTTGAGAAGTACGGCAACGACATTGAGATGACG ACGAACCGTTACGAGGACATGGTGCCCCGTCAGCAGCCTCGGACCATGGTTTGA
Transcript	>Hirsu2\|49 ATGGGCCGCTTCCCGCCGCTGCTCGTCGGAGCCTTGAGCGCCTTGCACATCCTGGGAGCCACGGCCCAGGCGCCT CAGCCACCGCCGACACCGCAGGCGTCAGGATGCATCCTCGCATGCACCAACCAGCTCAAGGCCAAATTTCAAGAC TTCAACTGCAAGAACGCCGACGATGCTGGCTGCCTGTGCAAAAACCAGAACTTTGGCTTCGGCCTTTTGTGCGGG CCATCTTCCTGCGCAGTCCAGCGCTCCGACCCGGGAAAAGGCCGCACCGGCATCATCCCAGTCGCCCCATCCGAC GAATGCTCAACCTTCCGCGACCCCCACCTCCATTCAAGGCGCGCCCGCCACAACACGGCCGTCGTCAACAAGCTC AGCGGCCCATGTCGCGACGGGCACTGCCCCCGCTTCGTCCACCTCTGCGACGTCTGCTTCCTCCGCAACATCCGA TTCCCCGATCAGCACCACCACTCCACCGTGGTCGGAATCGGGCTCGGCGTCGGAGGGGCTGTCATTGCCCTCGCC AGCATAGGCGTTGGCCTCCTGCTGAGAGGCCGCAAGCGAAAGCCGCGTCCGTCGATGGAGATTTCGAAGCCACTT CCCGGCTCGGGCAGAACCTATGGCGGCCGTGGGGCAAACTCGTTTGAGAAGTACGGCAACGACATTGAGATGACG ACGAACCGTTACGAGGACATGGTGCCCCGTCAGCAGCCTCGGACCATGGTTTGA
Gene	>Hirsu2\|49 ATGGGCCGCTTCCCGCCGCTGCTCGTCGGAGCCTTGAGCGCCTTGCACATCCTGGGAGCCACGGCCCAGGCGCCT CAGCCACCGCCGACACCGCAGGCGTCAGGATGCATCGTACGTTGTCGACGTCGGATGCTGGTAGCACCATATGCT GACCCTGACCCTCCAGCTCGCATGCACCAACCAGCTCAAGGCCAAATTTCAAGACTTCAACTGCAAGAACGCCGA CGATGCTGGCTGCCTGTGCAAAAACCAGAACTTTGGCTTCGGCGTACGTGATTGCAGCGCCAACTGCATCACCGA CAAATCAGCCAAGGTTGACCTGTTTCCCGCCGGAAGCTTTTGTGCGGGTGAGTATGCCCTGCCAAGCCGAGACCC CCAGCTTGAGTCTGACTGCCGGCACTCCAGGCCATCTTCCTGCGCAGTCCAGCGCTCCGACCCGGGAAAAGGCCG CACCGGCATCATCCCAGTCGCCCCATCCGACGAATGCTCAACCTTCCGCGACCCCCACCTCCATTCAAGGCGCGC CCGCCACAACACGGCCGTCGTCAACAAGCTCAGCGGCCCATGTCGCGACGGGCACTGCCCCCGCTTCGTCCACCG TGAGTGCACTTGATACGAGTTTTCAGACGAGGGCCGAGATGCCACTGACACGACGGGAACACCTAGTCTGCGACG TCTGCTTCCTCCGCAACATCCGATTCCCCGATCAGCACCACCACGTCGGCTGCCGCAGCAAGCGACTCCGCCGGC TCCGGCTTACCCCAGTCCACCGTGGTCGGAATCGGGCTCGGCGTCGGAGGGGCTGTCATTGCCCTCGCCAGCATA GGCGTTGGCCTCCTGCTGAGAGGCCGCAAGCGAAAGCCGCGTCCGTCGATGGAGATTTCGAAGCCACTTCCCGGC TCGGGCAGAACCTATGGCGGCCGTGGGGCAAACTCGTTTGAGAAGTACGGCAACGACATTGAGATGACGACGAAC CGTTACGAGGACATGGTGCCCCGTCAGCAGCCTCGGACCATGGTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail