Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4896
Gene name
LocationContig_2466:108..1470
Strand+
Gene length (bp)1362
Transcript length (bp)1362
Coding sequence length (bp)1362
Protein length (aa) 454

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03595 SLAC1 Voltage-dependent anion channel 7.1E-85 95 433

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P50537|MAE1_SCHPO Malic acid transport protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mae1 PE=1 SV=1 76 449 1.0E-71
sp|O59815|MAE2_SCHPO Putative malic acid transport protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC794.06 PE=3 SV=1 85 451 4.0E-64
sp|A3QUP1|SSU1_TRIRU Sulfite efflux pump SSU1 OS=Trichophyton rubrum GN=SSU1 PE=2 SV=1 100 429 1.0E-21
sp|A3R044|SSU1_ARTBC Sulfite efflux pump SSU1 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=SSU1 PE=2 SV=1 100 429 2.0E-21
sp|C5G0E3|SSU1_ARTOC Sulfite efflux pump SSU1 OS=Arthroderma otae (strain ATCC MYA-4605 / CBS 113480) GN=SSU1 PE=3 SV=2 100 429 2.0E-18
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Swissprot ID Swissprot Description Start End E-value
sp|P50537|MAE1_SCHPO Malic acid transport protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mae1 PE=1 SV=1 76 449 1.0E-71
sp|O59815|MAE2_SCHPO Putative malic acid transport protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC794.06 PE=3 SV=1 85 451 4.0E-64
sp|A3QUP1|SSU1_TRIRU Sulfite efflux pump SSU1 OS=Trichophyton rubrum GN=SSU1 PE=2 SV=1 100 429 1.0E-21
sp|A3R044|SSU1_ARTBC Sulfite efflux pump SSU1 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=SSU1 PE=2 SV=1 100 429 2.0E-21
sp|C5G0E3|SSU1_ARTOC Sulfite efflux pump SSU1 OS=Arthroderma otae (strain ATCC MYA-4605 / CBS 113480) GN=SSU1 PE=3 SV=2 100 429 2.0E-18
sp|Q58172|Y762_METJA Uncharacterized transporter MJ0762 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0762 PE=3 SV=1 90 441 5.0E-09
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GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0055085 transmembrane transport Yes
GO:0031224 intrinsic component of membrane No
GO:0008150 biological_process No
GO:0006810 transport No
GO:0051179 localization No
GO:0051234 establishment of localization No
GO:0044425 membrane part No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 35 0.45

Transmembrane Domains

Domain # Start End Length
1 130 152 22
2 167 189 22
3 196 218 22
4 233 255 22
5 262 284 22
6 345 367 22
7 380 402 22
8 412 434 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4896
MAANRNGSRSQSWTDSNQSTRRNSEVGPGSRDYPPLDCPTDEKHGNGKAAMGFYTPTPVLEARGNDGGGHQHPAP
EIDIYDPNRPKLPFRQRLHHFTWAWYTWPMSTGGLSLLIFAQPHQFTGLKTIGLVVYILNILIFTTITILMLTRF
FLHPGDMSSSIKHPREGFFLPTFFLSIATLITGTERYAIPKNDAALVWAIQGAFWAYLAVTLVLAVGQYSFVFAA
HSFGLQTMMPTWILPIFPIMLSGTIASVIADTQPDIAAVPIIVAGLTCQGLGFSVAVMMYAHMVGRLMQSGLPNR
EHRPGLFMCVGPPAFTALAIIGMAKGLPKNISGEEDGSMFLDNGVIRTIALMSAVFLWALSFWWFGIGLIAVIQS
PPKYFHLGWWAMVFPNTGFTLATISIANELKSEAVLWVTTGMSIFMICMYLFVLVNHIIAVLRQDIMYPGRDEDV
EDH*
Coding >Hirsu2|4896
ATGGCGGCGAACAGAAACGGGTCGAGATCGCAAAGCTGGACCGACTCGAACCAGTCGACGCGGCGAAACTCAGAA
GTCGGCCCCGGCTCTAGGGACTACCCTCCGCTCGACTGCCCGACGGACGAGAAGCACGGCAACGGCAAGGCGGCC
ATGGGCTTCTACACGCCGACGCCGGTGCTCGAGGCCCGCGGCAACGACGGCGGCGGCCACCAGCACCCGGCGCCC
GAGATCGACATCTACGACCCGAACCGGCCCAAGCTGCCGTTCCGCCAGCGGCTGCACCACTTCACCTGGGCCTGG
TACACGTGGCCGATGAGCACGGGCGGCCTGTCGCTGCTCATCTTCGCGCAGCCGCACCAGTTCACCGGGCTCAAG
ACGATCGGGCTGGTCGTCTACATCCTCAACATCCTCATCTTCACCACCATCACCATCCTGATGCTGACCCGCTTC
TTCCTGCACCCGGGCGACATGTCGAGCTCCATCAAGCACCCGCGCGAGGGCTTCTTCCTCCCGACCTTCTTCCTC
TCCATCGCCACCCTCATCACCGGCACCGAGCGGTACGCCATCCCCAAGAACGACGCCGCCCTCGTCTGGGCCATC
CAGGGCGCCTTCTGGGCCTACCTGGCCGTCACCCTCGTCCTGGCCGTCGGCCAGTACAGCTTCGTCTTCGCCGCC
CACAGCTTCGGCCTGCAGACGATGATGCCGACCTGGATCCTGCCCATCTTCCCCATCATGCTGTCCGGCACCATC
GCCTCCGTCATCGCCGACACCCAGCCCGACATCGCCGCCGTGCCCATCATCGTCGCCGGCCTGACCTGCCAGGGC
CTCGGCTTCTCCGTCGCCGTCATGATGTACGCCCACATGGTCGGCCGCCTGATGCAGTCCGGCCTGCCCAACCGC
GAGCACCGCCCGGGCCTGTTCATGTGCGTCGGGCCGCCTGCCTTCACCGCGCTCGCCATCATCGGCATGGCCAAG
GGCCTGCCCAAAAACATCAGCGGCGAAGAGGACGGCTCCATGTTCCTCGACAACGGCGTCATCCGCACCATCGCC
CTCATGAGCGCCGTCTTCCTCTGGGCCCTGAGCTTTTGGTGGTTCGGCATCGGCCTCATCGCCGTCATCCAGTCG
CCCCCCAAGTACTTCCACCTCGGCTGGTGGGCCATGGTCTTCCCCAACACCGGCTTCACCCTCGCCACCATCTCC
ATCGCCAACGAGCTGAAGAGCGAGGCCGTGCTCTGGGTCACGACCGGCATGAGCATCTTCATGATCTGCATGTAC
CTCTTCGTCCTTGTCAACCACATCATCGCCGTCCTCAGGCAGGATATCATGTACCCGGGCCGAGACGAGGACGTG
GAAGACCACTGA
Transcript >Hirsu2|4896
ATGGCGGCGAACAGAAACGGGTCGAGATCGCAAAGCTGGACCGACTCGAACCAGTCGACGCGGCGAAACTCAGAA
GTCGGCCCCGGCTCTAGGGACTACCCTCCGCTCGACTGCCCGACGGACGAGAAGCACGGCAACGGCAAGGCGGCC
ATGGGCTTCTACACGCCGACGCCGGTGCTCGAGGCCCGCGGCAACGACGGCGGCGGCCACCAGCACCCGGCGCCC
GAGATCGACATCTACGACCCGAACCGGCCCAAGCTGCCGTTCCGCCAGCGGCTGCACCACTTCACCTGGGCCTGG
TACACGTGGCCGATGAGCACGGGCGGCCTGTCGCTGCTCATCTTCGCGCAGCCGCACCAGTTCACCGGGCTCAAG
ACGATCGGGCTGGTCGTCTACATCCTCAACATCCTCATCTTCACCACCATCACCATCCTGATGCTGACCCGCTTC
TTCCTGCACCCGGGCGACATGTCGAGCTCCATCAAGCACCCGCGCGAGGGCTTCTTCCTCCCGACCTTCTTCCTC
TCCATCGCCACCCTCATCACCGGCACCGAGCGGTACGCCATCCCCAAGAACGACGCCGCCCTCGTCTGGGCCATC
CAGGGCGCCTTCTGGGCCTACCTGGCCGTCACCCTCGTCCTGGCCGTCGGCCAGTACAGCTTCGTCTTCGCCGCC
CACAGCTTCGGCCTGCAGACGATGATGCCGACCTGGATCCTGCCCATCTTCCCCATCATGCTGTCCGGCACCATC
GCCTCCGTCATCGCCGACACCCAGCCCGACATCGCCGCCGTGCCCATCATCGTCGCCGGCCTGACCTGCCAGGGC
CTCGGCTTCTCCGTCGCCGTCATGATGTACGCCCACATGGTCGGCCGCCTGATGCAGTCCGGCCTGCCCAACCGC
GAGCACCGCCCGGGCCTGTTCATGTGCGTCGGGCCGCCTGCCTTCACCGCGCTCGCCATCATCGGCATGGCCAAG
GGCCTGCCCAAAAACATCAGCGGCGAAGAGGACGGCTCCATGTTCCTCGACAACGGCGTCATCCGCACCATCGCC
CTCATGAGCGCCGTCTTCCTCTGGGCCCTGAGCTTTTGGTGGTTCGGCATCGGCCTCATCGCCGTCATCCAGTCG
CCCCCCAAGTACTTCCACCTCGGCTGGTGGGCCATGGTCTTCCCCAACACCGGCTTCACCCTCGCCACCATCTCC
ATCGCCAACGAGCTGAAGAGCGAGGCCGTGCTCTGGGTCACGACCGGCATGAGCATCTTCATGATCTGCATGTAC
CTCTTCGTCCTTGTCAACCACATCATCGCCGTCCTCAGGCAGGATATCATGTACCCGGGCCGAGACGAGGACGTG
GAAGACCACTGA
Gene >Hirsu2|4896
ATGGCGGCGAACAGAAACGGGTCGAGATCGCAAAGCTGGACCGACTCGAACCAGTCGACGCGGCGAAACTCAGAA
GTCGGCCCCGGCTCTAGGGACTACCCTCCGCTCGACTGCCCGACGGACGAGAAGCACGGCAACGGCAAGGCGGCC
ATGGGCTTCTACACGCCGACGCCGGTGCTCGAGGCCCGCGGCAACGACGGCGGCGGCCACCAGCACCCGGCGCCC
GAGATCGACATCTACGACCCGAACCGGCCCAAGCTGCCGTTCCGCCAGCGGCTGCACCACTTCACCTGGGCCTGG
TACACGTGGCCGATGAGCACGGGCGGCCTGTCGCTGCTCATCTTCGCGCAGCCGCACCAGTTCACCGGGCTCAAG
ACGATCGGGCTGGTCGTCTACATCCTCAACATCCTCATCTTCACCACCATCACCATCCTGATGCTGACCCGCTTC
TTCCTGCACCCGGGCGACATGTCGAGCTCCATCAAGCACCCGCGCGAGGGCTTCTTCCTCCCGACCTTCTTCCTC
TCCATCGCCACCCTCATCACCGGCACCGAGCGGTACGCCATCCCCAAGAACGACGCCGCCCTCGTCTGGGCCATC
CAGGGCGCCTTCTGGGCCTACCTGGCCGTCACCCTCGTCCTGGCCGTCGGCCAGTACAGCTTCGTCTTCGCCGCC
CACAGCTTCGGCCTGCAGACGATGATGCCGACCTGGATCCTGCCCATCTTCCCCATCATGCTGTCCGGCACCATC
GCCTCCGTCATCGCCGACACCCAGCCCGACATCGCCGCCGTGCCCATCATCGTCGCCGGCCTGACCTGCCAGGGC
CTCGGCTTCTCCGTCGCCGTCATGATGTACGCCCACATGGTCGGCCGCCTGATGCAGTCCGGCCTGCCCAACCGC
GAGCACCGCCCGGGCCTGTTCATGTGCGTCGGGCCGCCTGCCTTCACCGCGCTCGCCATCATCGGCATGGCCAAG
GGCCTGCCCAAAAACATCAGCGGCGAAGAGGACGGCTCCATGTTCCTCGACAACGGCGTCATCCGCACCATCGCC
CTCATGAGCGCCGTCTTCCTCTGGGCCCTGAGCTTTTGGTGGTTCGGCATCGGCCTCATCGCCGTCATCCAGTCG
CCCCCCAAGTACTTCCACCTCGGCTGGTGGGCCATGGTCTTCCCCAACACCGGCTTCACCCTCGCCACCATCTCC
ATCGCCAACGAGCTGAAGAGCGAGGCCGTGCTCTGGGTCACGACCGGCATGAGCATCTTCATGATCTGCATGTAC
CTCTTCGTCCTTGTCAACCACATCATCGCCGTCCTCAGGCAGGATATCATGTACCCGGGCCGAGACGAGGACGTG
GAAGACCACTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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