© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|4893 |
| Gene name | |
| Location | Contig_2463:95..1466 |
| Strand | - |
| Gene length (bp) | 1371 |
| Transcript length (bp) | 1080 |
| Coding sequence length (bp) | 1080 |
| Protein length (aa) | 360 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03151 | TPT | Triose-phosphate Transporter family | 7.6E-11 | 131 | 320 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q10354|YDB1_SCHPO | Uncharacterized transporter C22E12.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC22E12.01 PE=3 SV=2 | 108 | 340 | 3.0E-50 |
| sp|Q8H184|PT106_ARATH | Probable sugar phosphate/phosphate translocator At1g06470 OS=Arabidopsis thaliana GN=At1g06470 PE=2 SV=1 | 106 | 353 | 9.0E-37 |
| sp|Q8VCX2|S35C2_MOUSE | Solute carrier family 35 member C2 OS=Mus musculus GN=Slc35c2 PE=1 SV=1 | 123 | 340 | 2.0E-30 |
| sp|Q03697|YMD8_YEAST | Putative nucleotide-sugar transporter YMD8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YMD8 PE=1 SV=1 | 133 | 333 | 1.0E-29 |
| sp|Q9NQQ7|S35C2_HUMAN | Solute carrier family 35 member C2 OS=Homo sapiens GN=SLC35C2 PE=1 SV=2 | 134 | 340 | 4.0E-29 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q10354|YDB1_SCHPO | Uncharacterized transporter C22E12.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC22E12.01 PE=3 SV=2 | 108 | 340 | 3.0E-50 |
| sp|Q8H184|PT106_ARATH | Probable sugar phosphate/phosphate translocator At1g06470 OS=Arabidopsis thaliana GN=At1g06470 PE=2 SV=1 | 106 | 353 | 9.0E-37 |
| sp|Q8VCX2|S35C2_MOUSE | Solute carrier family 35 member C2 OS=Mus musculus GN=Slc35c2 PE=1 SV=1 | 123 | 340 | 2.0E-30 |
| sp|Q03697|YMD8_YEAST | Putative nucleotide-sugar transporter YMD8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YMD8 PE=1 SV=1 | 133 | 333 | 1.0E-29 |
| sp|Q9NQQ7|S35C2_HUMAN | Solute carrier family 35 member C2 OS=Homo sapiens GN=SLC35C2 PE=1 SV=2 | 134 | 340 | 4.0E-29 |
| sp|Q3E6T0|PT525_ARATH | Probable sugar phosphate/phosphate translocator At5g25400 OS=Arabidopsis thaliana GN=At5g25400 PE=2 SV=1 | 121 | 338 | 6.0E-15 |
| sp|Q9SUV2|PT432_ARATH | Probable sugar phosphate/phosphate translocator At4g32390 OS=Arabidopsis thaliana GN=At4g32390 PE=3 SV=1 | 123 | 338 | 8.0E-15 |
| sp|Q9SKJ7|PT225_ARATH | Probable sugar phosphate/phosphate translocator At2g25520 OS=Arabidopsis thaliana GN=At2g25520 PE=1 SV=1 | 123 | 338 | 1.0E-14 |
| sp|Q94EI9|PT314_ARATH | Probable sugar phosphate/phosphate translocator At3g14410 OS=Arabidopsis thaliana GN=At3g14410 PE=2 SV=1 | 116 | 338 | 8.0E-14 |
| sp|Q9LFN3|PT511_ARATH | Probable sugar phosphate/phosphate translocator At5g11230 OS=Arabidopsis thaliana GN=At5g11230 PE=2 SV=1 | 121 | 338 | 2.0E-13 |
| sp|Q9C8M1|PT153_ARATH | Probable sugar phosphate/phosphate translocator At1g53660 OS=Arabidopsis thaliana GN=At1g53660 PE=3 SV=2 | 134 | 338 | 2.0E-12 |
| sp|Q9LRP2|PT317_ARATH | Probable sugar phosphate/phosphate translocator At3g17430 OS=Arabidopsis thaliana GN=At3g17430 PE=1 SV=1 | 144 | 338 | 6.0E-11 |
| sp|Q9SFE9|GONS5_ARATH | GDP-mannose transporter GONST5 OS=Arabidopsis thaliana GN=GONST5 PE=2 SV=1 | 134 | 299 | 2.0E-07 |
| sp|Q9C521|UGAL1_ARATH | UDP-galactose transporter 1 OS=Arabidopsis thaliana GN=UDP-GALT1 PE=2 SV=1 | 132 | 299 | 4.0E-07 |
| sp|Q9LNH5|PT148_ARATH | Probable sugar phosphate/phosphate translocator At1g48230 OS=Arabidopsis thaliana GN=At1g48230 PE=2 SV=2 | 144 | 338 | 2.0E-06 |
| sp|Q9FYE5|PT504_ARATH | Probable sugar phosphate/phosphate translocator At5g04160 OS=Arabidopsis thaliana GN=At5g04160 PE=2 SV=1 | 134 | 339 | 7.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 29 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 127 | 146 | 19 |
| 2 | 161 | 183 | 22 |
| 3 | 215 | 234 | 19 |
| 4 | 244 | 266 | 22 |
| 5 | 273 | 292 | 19 |
| 6 | 296 | 315 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|4893 MEPVVGHRRRKSSLINPVGAHLPAHANAHAHAHAHRARLSITIPHESRDEDAASARAGDFAKPESSRDSFSDQDA HDDEEMGLTSRDRDRRRRKRRRNTRLDNRIAQEKDVSPDEMKEADQDVMRRLLVNGLFILLWYMFSLSISLYNKW MFDQNRLNFAFPLFTTSMHMLVQFVLAGLVLYFVPSLRPHAHSSDGGRSRHETEPNNSTGMSKMFYLTRIGPCGA ATGLDIGLGNASLKFISLTFYTMCKSSSLAFVLLFAFLFRLETPTWRLVTIIAIMTMGVILMVFGEVQFKLGGFV LVISAAFFSGFRWGLTQILLLRNPATSNPFSSIFFLSPVIGAPSRRRSSCSSPAASPSS* |
| Coding | >Hirsu2|4893 ATGGAGCCCGTCGTGGGCCACCGGCGGCGCAAGAGCAGCCTCATCAATCCGGTTGGGGCCCATCTGCCCGCCCAC GCCAACGCCCACGCCCACGCCCACGCCCACCGCGCCCGCCTCTCCATCACCATCCCCCACGAGTCCCGCGATGAG GACGCGGCCTCGGCCCGCGCCGGCGACTTCGCCAAGCCCGAGTCGTCCCGCGACAGCTTCAGCGACCAGGACGCC CACGACGACGAGGAGATGGGCCTGACGAGCAGAGACCGCGACCGCCGCCGCCGCAAGCGCCGCCGGAACACGCGC CTCGACAACCGCATCGCCCAGGAGAAGGACGTGTCGCCCGACGAGATGAAGGAGGCCGACCAGGACGTCATGCGC CGCCTGCTCGTCAATGGCCTCTTCATCCTGTTGTGGTACATGTTCTCGCTCTCCATCTCTCTCTACAACAAGTGG ATGTTTGACCAAAACCGACTTAATTTCGCCTTTCCCCTCTTCACCACGTCGATGCACATGCTCGTGCAATTCGTC CTGGCCGGCCTGGTCCTGTACTTTGTACCCTCGCTGCGGCCCCACGCCCACAGCTCCGACGGCGGCCGCTCTCGC CACGAGACGGAGCCCAACAACAGCACCGGCATGTCCAAGATGTTCTACCTGACGCGCATCGGGCCCTGCGGCGCC GCCACCGGCCTCGACATCGGGCTCGGGAACGCCTCTCTCAAGTTCATCAGCCTCACCTTTTACACCATGTGCAAG TCGTCGTCGCTCGCCTTCGTCCTCCTCTTCGCCTTCCTCTTCCGGCTCGAGACGCCGACGTGGCGGCTGGTGACC ATCATCGCCATCATGACCATGGGCGTCATCCTCATGGTCTTCGGCGAGGTGCAGTTCAAGCTCGGCGGCTTCGTC CTCGTCATCTCGGCCGCCTTCTTCTCCGGCTTCCGCTGGGGCCTGACGCAGATCCTGCTGCTGCGCAACCCGGCC ACGTCGAACCCCTTCTCCAGCATCTTCTTCCTGTCGCCCGTCATTGGGGCCCCGTCACGGCGCCGCTCTTCCTGC TCTTCCCCGGCTGCATCGCCTTCCTCATGA |
| Transcript | >Hirsu2|4893 ATGGAGCCCGTCGTGGGCCACCGGCGGCGCAAGAGCAGCCTCATCAATCCGGTTGGGGCCCATCTGCCCGCCCAC GCCAACGCCCACGCCCACGCCCACGCCCACCGCGCCCGCCTCTCCATCACCATCCCCCACGAGTCCCGCGATGAG GACGCGGCCTCGGCCCGCGCCGGCGACTTCGCCAAGCCCGAGTCGTCCCGCGACAGCTTCAGCGACCAGGACGCC CACGACGACGAGGAGATGGGCCTGACGAGCAGAGACCGCGACCGCCGCCGCCGCAAGCGCCGCCGGAACACGCGC CTCGACAACCGCATCGCCCAGGAGAAGGACGTGTCGCCCGACGAGATGAAGGAGGCCGACCAGGACGTCATGCGC CGCCTGCTCGTCAATGGCCTCTTCATCCTGTTGTGGTACATGTTCTCGCTCTCCATCTCTCTCTACAACAAGTGG ATGTTTGACCAAAACCGACTTAATTTCGCCTTTCCCCTCTTCACCACGTCGATGCACATGCTCGTGCAATTCGTC CTGGCCGGCCTGGTCCTGTACTTTGTACCCTCGCTGCGGCCCCACGCCCACAGCTCCGACGGCGGCCGCTCTCGC CACGAGACGGAGCCCAACAACAGCACCGGCATGTCCAAGATGTTCTACCTGACGCGCATCGGGCCCTGCGGCGCC GCCACCGGCCTCGACATCGGGCTCGGGAACGCCTCTCTCAAGTTCATCAGCCTCACCTTTTACACCATGTGCAAG TCGTCGTCGCTCGCCTTCGTCCTCCTCTTCGCCTTCCTCTTCCGGCTCGAGACGCCGACGTGGCGGCTGGTGACC ATCATCGCCATCATGACCATGGGCGTCATCCTCATGGTCTTCGGCGAGGTGCAGTTCAAGCTCGGCGGCTTCGTC CTCGTCATCTCGGCCGCCTTCTTCTCCGGCTTCCGCTGGGGCCTGACGCAGATCCTGCTGCTGCGCAACCCGGCC ACGTCGAACCCCTTCTCCAGCATCTTCTTCCTGTCGCCCGTCATTGGGGCCCCGTCACGGCGCCGCTCTTCCTGC TCTTCCCCGGCTGCATCGCCTTCCTCATGA |
| Gene | >Hirsu2|4893 ATGGAGCCCGTCGTGGGCCACCGGCGGCGCAAGAGCAGCCTCATCAATCCGGTTGGGGCCCATCTGCCCGCCCAC GCCAACGCCCACGCCCACGCCCACGCCCACCGCGCCCGCCTCTCCATCACCATCCCCCACGAGTCCCGCGATGAG GACGCGGCCTCGGCCCGCGCCGGCGACTTCGCCAAGCCCGAGTCGTCCCGCGACAGCTTCAGCGACCAGGACGCC CACGACGACGAGGAGATGGGCCTGACGAGCAGAGACCGCGACCGCCGCCGCCGCAAGCGCCGCCGGAACACGCGC CTCGACAACCGCATCGCCCAGGAGAAGGACGTGTCGCCCGACGAGATGAAGGAGGCCGACCAGGACGTCATGCGC CGCCTGCTCGTCAATGGCCTCTTCATCCTGTTGTGGTACATGTTCTCGCTCTCCATCTCTCTCGTGCGTTGCCCC CTATTCCCGGTCCCGCTTCTGATATCCGGCCTCCCCCCCCTTTTCCCCCCCCTCACCTGGCCTCCCTCCCAACCC AGCCTCGTGTTTGAGTCGACCGCGGACCCCGGGCTAATGATCGCGAAATGCGTACAGTACAACAAGTGGATGTTT GACCAAAACCGACTTAATTTCGCCTTTCCCCTCTTCACCACGTCGATGCACATGCTCGTGCAATTCGTCCTGGCC GGCCTGGTCCTGTACTTTGTACCCTCGCTGCGGCCCCACGCCCACAGCTCCGACGGCGGCCGCTCTCGCCACGAG ACGGAGCCCAACAACAGCACCGGCATGTCCAAGATGTTCTACCTGACGCGCATCGGGCCCTGCGGCGCCGCCACC GGCCTCGACATCGGGCTCGGGAACGCCTCTCTCAAGTTCATCAGCCTCACCTTTTACAGTACGTGTTTTTGCTCC CCCCATAGGCGTGCGCGCGCGACGTGATGCTGACGAGTCGCCGACCAGCCATGTGCAAGTCGTCGTCGCTCGCCT TCGTCCTCCTCTTCGCCTTCCTCTTCCGGCTCGAGACGCCGACGTGGCGGCTGGTGACCATCATCGCCATCATGA CCATGGGCGTCATCCTCATGGTCTTCGGCGAGGTGCAGTTCAAGCTCGGCGGCTTCGTCCTCGTCATCTCGGCCG CCTTCTTCTCCGGCTTCCGCTGGGGCCTGACGCAGATCCTGCTGCTGCGCAACCCGGCCACGTCGAACCCCTTCT CCAGCATCTTCTTCCTGTCGCCCGTCATGTTCGTCACCCTGCTCTCGCTCGCCATCCCCGTCGAGGGCTTCGGCC CGCTGTGGGACGGCCTGCGGACGCTGGGCCGCGAGTGGGGCCCCGTCACGGCGCCGCTCTTCCTGCTCTTCCCCG GCTGCATCGCCTTCCTCATGA |