Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4882
Gene name
LocationContig_246:6727..7376
Strand+
Gene length (bp)649
Transcript length (bp)534
Coding sequence length (bp)534
Protein length (aa) 178

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1258 0.0622 0.9093 0.1142 0.0929 0.046 0.2235 0.4346 0.1073 0.0353

SignalP

SignalP signal predicted Location Score
Yes 1 - 22 0.999723

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup1903
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|5902
Ophiocordyceps australis map64 (Brazil) OphauB2|2888
Ophiocordyceps camponoti-floridani Ophcf2|03731
Ophiocordyceps camponoti-rufipedis Ophun1|4709
Ophiocordyceps kimflemingae Ophio5|3387
Ophiocordyceps subramaniannii Hirsu2|1990
Ophiocordyceps subramaniannii Hirsu2|4882 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4882
MIRMLALPLLRLSAILAPGASATVLPTSLNLTAVWASKGESTLECWQIGPLQRSADPGTSGAPFMFLGEVVNTTF
TVLPPGTDGGLHNAPSFQFVFFASGLAHVTLPHSKDEAWVRGGKNGLIIAADTADVSSHGHRTEYPGGDNTVTLQ
IPIKNPDEFKRLRLHSGPCTEAEISAV*
Coding >Hirsu2|4882
ATGATCAGGATGCTTGCCCTGCCGCTGCTGCGCTTGTCGGCAATACTCGCCCCCGGCGCCTCGGCCACCGTGCTG
CCGACGAGCCTCAACCTCACCGCCGTCTGGGCCTCCAAGGGCGAGTCGACGCTCGAGTGCTGGCAGATCGGCCCG
CTCCAGCGGTCGGCGGACCCGGGGACCAGCGGGGCGCCGTTCATGTTCCTCGGCGAGGTCGTCAACACGACCTTT
ACCGTACTTCCGCCGGGCACGGACGGGGGTCTGCACAATGCCCCGTCATTTCAGTTTGTCTTCTTCGCCTCGGGC
CTGGCACACGTCACGCTCCCGCACAGCAAGGACGAAGCCTGGGTTCGTGGGGGGAAGAACGGGCTGATTATTGCG
GCCGACACGGCTGACGTCTCGTCCCACGGGCATCGGACTGAGTATCCCGGCGGGGACAACACCGTTACGCTGCAG
ATTCCGATCAAGAACCCAGATGAGTTCAAACGGCTTCGCCTGCACAGCGGCCCTTGTACGGAGGCTGAAATCAGT
GCGGTCTGA
Transcript >Hirsu2|4882
ATGATCAGGATGCTTGCCCTGCCGCTGCTGCGCTTGTCGGCAATACTCGCCCCCGGCGCCTCGGCCACCGTGCTG
CCGACGAGCCTCAACCTCACCGCCGTCTGGGCCTCCAAGGGCGAGTCGACGCTCGAGTGCTGGCAGATCGGCCCG
CTCCAGCGGTCGGCGGACCCGGGGACCAGCGGGGCGCCGTTCATGTTCCTCGGCGAGGTCGTCAACACGACCTTT
ACCGTACTTCCGCCGGGCACGGACGGGGGTCTGCACAATGCCCCGTCATTTCAGTTTGTCTTCTTCGCCTCGGGC
CTGGCACACGTCACGCTCCCGCACAGCAAGGACGAAGCCTGGGTTCGTGGGGGGAAGAACGGGCTGATTATTGCG
GCCGACACGGCTGACGTCTCGTCCCACGGGCATCGGACTGAGTATCCCGGCGGGGACAACACCGTTACGCTGCAG
ATTCCGATCAAGAACCCAGATGAGTTCAAACGGCTTCGCCTGCACAGCGGCCCTTGTACGGAGGCTGAAATCAGT
GCGGTCTGA
Gene >Hirsu2|4882
ATGATCAGGATGCTTGCCCTGCCGCTGCTGCGCTTGTCGGCAATACTCGCCCCCGGCGCCTCGGCCACCGTGCTG
CCGACGAGCCTCAACCTCACCGCCGTCTGGGCCTCCAAGGGCGAGTCGACGCTCGAGTGCTGGCAGATCGGCCCG
CTCCAGCGGTCGGCGGACCCGGGGACCAGCGGGGCGCCGTTCATGTTCCTCGGCGAGGTCGTCAACACGACCTTT
ACCGTACTTCCGCCGGGCACGGACGGGGGTCTGCACAATGCCCCGTCATTTCAGTAAGCACTCTCAGAAATCATC
GGCGGCATCATGTCCATCTGCTTCTGCCTCTCAGACCATGCCCAGCTTTCGCCAAGATGATTAAACTCATAGCAA
ACTCACTCAACCGCACAGGTTTGTCTTCTTCGCCTCGGGCCTGGCACACGTCACGCTCCCGCACAGCAAGGACGA
AGCCTGGGTTCGTGGGGGGAAGAACGGGCTGATTATTGCGGCCGACACGGCTGACGTCTCGTCCCACGGGCATCG
GACTGAGTATCCCGGCGGGGACAACACCGTTACGCTGCAGATTCCGATCAAGAACCCAGATGAGTTCAAACGGCT
TCGCCTGCACAGCGGCCCTTGTACGGAGGCTGAAATCAGTGCGGTCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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