Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4877
Gene name
LocationContig_2458:154..2001
Strand+
Gene length (bp)1847
Transcript length (bp)1503
Coding sequence length (bp)1503
Protein length (aa) 501

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04082 Fungal_trans Fungal specific transcription factor domain 4.7E-08 381 482
PF00096 zf-C2H2 Zinc finger, C2H2 type 9.2E-03 47 71
PF00096 zf-C2H2 Zinc finger, C2H2 type 3.9E-04 77 100

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q12139|YP022_YEAST Zinc finger protein YPR022C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPR022C PE=1 SV=1 56 160 4.0E-06

GO

GO Term Description Terminal node
GO:0003677 DNA binding Yes
GO:0006351 transcription, DNA-templated Yes
GO:0003676 nucleic acid binding Yes
GO:0005634 nucleus Yes
GO:0008270 zinc ion binding Yes
GO:0044238 primary metabolic process No
GO:0097659 nucleic acid-templated transcription No
GO:0044237 cellular metabolic process No
GO:0043170 macromolecule metabolic process No
GO:0097159 organic cyclic compound binding No
GO:0016070 RNA metabolic process No
GO:0032774 RNA biosynthetic process No
GO:0071704 organic substance metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0005488 binding No
GO:0043229 intracellular organelle No
GO:0046872 metal ion binding No
GO:0008152 metabolic process No
GO:0043169 cation binding No
GO:0008150 biological_process No
GO:0044260 cellular macromolecule metabolic process No
GO:0046483 heterocycle metabolic process No
GO:0043226 organelle No
GO:0003674 molecular_function No
GO:0005575 cellular_component No
GO:0090304 nucleic acid metabolic process No
GO:0043227 membrane-bounded organelle No
GO:0009987 cellular process No
GO:1901363 heterocyclic compound binding No
GO:0043167 ion binding No
GO:0018130 heterocycle biosynthetic process No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0044424 intracellular part No
GO:0034645 cellular macromolecule biosynthetic process No
GO:0009059 macromolecule biosynthetic process No
GO:0044249 cellular biosynthetic process No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0019438 aromatic compound biosynthetic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0009058 biosynthetic process No
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:0044464 cell part No
GO:1901576 organic substance biosynthetic process No
GO:0043231 intracellular membrane-bounded organelle No
GO:0006139 nucleobase-containing compound metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0046914 transition metal ion binding No
GO:0034641 cellular nitrogen compound metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 27 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF
C2H2 zinc finger

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4877
MDPSYGQTYAHGHAGAPYPSASVRPFVPKLTPVTKRVSRAKKGLAVHTCDLCRPPKTFTRAEHLRRHQLSHQPPA
LECQVPGCDKVFHRKDLLERHQQRHDHDERLSASPRRRSTSHPNSHGSPGGRSSYGERPLGPSPTHAASPFRSSP
PGTSPPSSTRGREMPLGPQGWPAAGGSTPQMLSHEDFSMPESTGVDILYGVTSTPSPGSWHDPSSSDSNYSTPPP
TSDGNPAAAIRASVEWNGPMAPVAAVSRSVPGSLDAGGPYSSHPFGYPSSSPPPAAPHGYPPAFGEPAGLSYPRY
EELYGSPVPSAAAARSLSPQMGVGPCSETLMTAPAAVPADRMMGSSVAAYDLPPETALGLLAAQDALQLGPDLAE
NMATYLNFYWEKVHPTYPIIHRATFEDAAGLDADHLEILRCAMAAVATQFLPQRDHRIRGSQLHACAWQMCEAVL
AQSASWTLPIMQAVLLCEYYARFRGRSKGAYRPSPRFNELYRMVSCPSPS*
Coding >Hirsu2|4877
ATGGATCCCTCCTACGGGCAGACCTACGCCCACGGGCACGCCGGCGCGCCCTATCCCAGCGCCTCCGTGAGGCCC
TTCGTCCCCAAGCTGACGCCCGTCACCAAGAGGGTAAGCCGGGCGAAGAAGGGCCTGGCGGTCCACACTTGCGAT
CTCTGCCGGCCCCCCAAGACCTTTACCAGGGCCGAGCACCTGAGGCGACACCAACTGAGCCATCAACCACCCGCC
CTGGAATGCCAGGTCCCCGGCTGTGACAAGGTCTTTCATCGCAAGGACCTGCTGGAGCGCCACCAGCAGAGACAT
GATCACGACGAAAGGCTGTCTGCCAGTCCCCGTCGCCGCTCGACGAGCCACCCAAACAGCCATGGGAGCCCGGGC
GGCCGGAGCAGCTACGGCGAGCGGCCGCTGGGGCCGTCGCCCACGCACGCGGCGTCGCCCTTCAGGAGCTCGCCC
CCGGGGACGAGCCCGCCGTCGAGCACGCGGGGCCGTGAGATGCCGCTGGGCCCGCAGGGCTGGCCAGCAGCGGGC
GGATCGACGCCCCAGATGCTGTCGCACGAAGACTTCTCGATGCCCGAGTCGACGGGGGTAGACATCCTGTACGGC
GTCACGTCGACGCCGTCGCCGGGCTCGTGGCACGATCCGTCCAGCTCGGACAGCAACTACTCGACGCCGCCGCCG
ACGTCGGACGGCAACCCGGCCGCCGCCATCCGCGCGAGCGTGGAGTGGAACGGGCCGATGGCCCCGGTGGCGGCG
GTCTCGAGGAGCGTCCCTGGGTCCCTGGACGCCGGCGGCCCCTATTCGTCGCACCCGTTCGGCTACCCTTCGTCG
TCCCCGCCGCCGGCCGCGCCGCACGGGTACCCGCCGGCGTTCGGCGAGCCGGCCGGGCTGTCGTACCCGCGGTAC
GAGGAGCTGTACGGGTCGCCGGTGCCGAGCGCGGCGGCGGCGCGCAGCCTGTCGCCGCAGATGGGCGTGGGCCCC
TGCTCGGAGACGCTGATGACGGCGCCGGCGGCGGTGCCGGCGGACCGGATGATGGGCTCGTCGGTGGCGGCGTAC
GACCTGCCGCCGGAGACGGCGCTCGGGCTGCTGGCGGCGCAGGACGCGCTGCAGCTGGGGCCGGACCTGGCCGAG
AACATGGCGACCTACCTCAACTTCTACTGGGAAAAGGTGCACCCGACCTACCCCATCATCCACCGCGCCACCTTC
GAGGACGCCGCCGGCCTCGACGCCGACCACCTCGAGATCCTCCGCTGCGCCATGGCCGCCGTCGCCACCCAGTTC
CTGCCGCAGCGCGACCACCGGATCCGCGGCAGCCAGCTGCACGCCTGCGCCTGGCAGATGTGCGAGGCGGTGCTG
GCGCAGTCGGCGAGCTGGACGCTGCCCATCATGCAGGCCGTCCTGCTGTGCGAGTACTACGCGCGCTTCCGCGGC
CGCAGCAAGGGCGCCTATCGCCCGTCGCCTCGATTCAACGAGTTGTACCGAATGGTCAGTTGCCCAAGCCCTTCC
TGA
Transcript >Hirsu2|4877
ATGGATCCCTCCTACGGGCAGACCTACGCCCACGGGCACGCCGGCGCGCCCTATCCCAGCGCCTCCGTGAGGCCC
TTCGTCCCCAAGCTGACGCCCGTCACCAAGAGGGTAAGCCGGGCGAAGAAGGGCCTGGCGGTCCACACTTGCGAT
CTCTGCCGGCCCCCCAAGACCTTTACCAGGGCCGAGCACCTGAGGCGACACCAACTGAGCCATCAACCACCCGCC
CTGGAATGCCAGGTCCCCGGCTGTGACAAGGTCTTTCATCGCAAGGACCTGCTGGAGCGCCACCAGCAGAGACAT
GATCACGACGAAAGGCTGTCTGCCAGTCCCCGTCGCCGCTCGACGAGCCACCCAAACAGCCATGGGAGCCCGGGC
GGCCGGAGCAGCTACGGCGAGCGGCCGCTGGGGCCGTCGCCCACGCACGCGGCGTCGCCCTTCAGGAGCTCGCCC
CCGGGGACGAGCCCGCCGTCGAGCACGCGGGGCCGTGAGATGCCGCTGGGCCCGCAGGGCTGGCCAGCAGCGGGC
GGATCGACGCCCCAGATGCTGTCGCACGAAGACTTCTCGATGCCCGAGTCGACGGGGGTAGACATCCTGTACGGC
GTCACGTCGACGCCGTCGCCGGGCTCGTGGCACGATCCGTCCAGCTCGGACAGCAACTACTCGACGCCGCCGCCG
ACGTCGGACGGCAACCCGGCCGCCGCCATCCGCGCGAGCGTGGAGTGGAACGGGCCGATGGCCCCGGTGGCGGCG
GTCTCGAGGAGCGTCCCTGGGTCCCTGGACGCCGGCGGCCCCTATTCGTCGCACCCGTTCGGCTACCCTTCGTCG
TCCCCGCCGCCGGCCGCGCCGCACGGGTACCCGCCGGCGTTCGGCGAGCCGGCCGGGCTGTCGTACCCGCGGTAC
GAGGAGCTGTACGGGTCGCCGGTGCCGAGCGCGGCGGCGGCGCGCAGCCTGTCGCCGCAGATGGGCGTGGGCCCC
TGCTCGGAGACGCTGATGACGGCGCCGGCGGCGGTGCCGGCGGACCGGATGATGGGCTCGTCGGTGGCGGCGTAC
GACCTGCCGCCGGAGACGGCGCTCGGGCTGCTGGCGGCGCAGGACGCGCTGCAGCTGGGGCCGGACCTGGCCGAG
AACATGGCGACCTACCTCAACTTCTACTGGGAAAAGGTGCACCCGACCTACCCCATCATCCACCGCGCCACCTTC
GAGGACGCCGCCGGCCTCGACGCCGACCACCTCGAGATCCTCCGCTGCGCCATGGCCGCCGTCGCCACCCAGTTC
CTGCCGCAGCGCGACCACCGGATCCGCGGCAGCCAGCTGCACGCCTGCGCCTGGCAGATGTGCGAGGCGGTGCTG
GCGCAGTCGGCGAGCTGGACGCTGCCCATCATGCAGGCCGTCCTGCTGTGCGAGTACTACGCGCGCTTCCGCGGC
CGCAGCAAGGGCGCCTATCGCCCGTCGCCTCGATTCAACGAGTTGTACCGAATGGTCAGTTGCCCAAGCCCTTCC
TGA
Gene >Hirsu2|4877
ATGGATCCCTCCTACGGGCAGACCTACGCCCACGGGCACGCCGGCGCGCCCTATCCCAGCGCCTCCGTGAGGCCC
TTCGTCCCCAAGCTGACGCCCGTCACCAAGAGGGTAAGCCGGGCGAAGAAGGGCCTGGCGGTCCACACTTGCGAT
CTCTGCCGGCCCCCCAAGGTACCGATCCGCTTCCGCCCCTCGACCTCGACTGGCTGACTGACGATGCCGCCTCAC
CCTTGCCTGTCCAGACCTTTACCAGGGCCGAGCACCTGAGGTTCGTTGTTGCCTTTCTCCCCCCGTCTCTCTCCG
TCTCCTTTGCCCGAGACCGAGGACGGGTTCAGGCCGGACTGACTGACACGTTCCTCGTTCCCTCTCCAGGCGACA
CCAACTGAGCCATCAACCACCCGCCCTGGAATGCCAGGTCCCCGGCTGTGACAAGGTCTTTCATCGCAAGGACCT
GCTGGAGCGCCACCAGCAGAGACAGTACGTTTGAGGAGTCGCGCCCAGCTCCCCCCCCCCCCCCCCCCCCCCCCC
CCCTTCCCTTGTCACGCTCCGGCCGCTCACGCGAGAGGCAGTGATCACGACGAAAGGCTGTCTGCCAGTCCCCGT
CGCCGCTCGACGAGCCACCCAAACAGCCATGGGAGCCCGGGCGGCCGGAGCAGCTACGGCGAGCGGCCGCTGGGG
CCGTCGCCCACGCACGCGGCGTCGCCCTTCAGGAGCTCGCCCCCGGGGACGAGCCCGCCGTCGAGCACGCGGGGC
CGTGAGATGCCGCTGGGCCCGCAGGGCTGGCCAGCAGCGGGCGGATCGACGCCCCAGATGCTGTCGCACGAAGAC
TTCTCGATGCCCGAGTCGACGGGGGTAGACATCCTGTACGGCGTCACGTCGACGCCGTCGCCGGGCTCGTGGCAC
GATCCGTCCAGCTCGGACAGCAACTACTCGACGCCGCCGCCGACGTCGGACGGCAACCCGGCCGCCGCCATCCGC
GCGAGCGTGGAGTGGAACGGGCCGATGGCCCCGGTGGCGGCGGTCTCGAGGAGCGTCCCTGGGTCCCTGGACGCC
GGCGGCCCCTATTCGTCGCACCCGTTCGGCTACCCTTCGTCGTCCCCGCCGCCGGCCGCGCCGCACGGGTACCCG
CCGGCGTTCGGCGAGCCGGCCGGGCTGTCGTACCCGCGGTACGAGGAGCTGTACGGGTCGCCGGTGCCGAGCGCG
GCGGCGGCGCGCAGCCTGTCGCCGCAGATGGGCGTGGGCCCCTGCTCGGAGACGCTGATGACGGCGCCGGCGGCG
GTGCCGGCGGACCGGATGATGGGCTCGTCGGTGGCGGCGTACGACCTGCCGCCGGAGACGGCGCTCGGGCTGCTG
GCGGCGCAGGACGCGCTGCAGCTGGGGCCGGACCTGGCCGAGAACATGGCGACCTACCTCAACTTCTACTGGGAA
AAGGTGCACCCGACCTACCCCATCATCCACCGCGCCACCTTCGAGGACGCCGCCGGCCTCGACGCCGACCACCTC
GAGATCCTCCGCTGCGCCATGGCCGCCGTCGCCACCCAGTTCCTGCCGCAGCGCGACCACCGGATCCGCGGCAGC
CAGCTGCACGCCTGCGCCTGGCAGATGTGCGAGGCGGTGGTGAGTGTGCCCCCATCCATCGTGACCGAGACGGAC
CTCGGCGGCTGCTGACGGGCCCTTGTTCCTGCGACATACAGCTGGCGCAGTCGGCGAGCTGGACGCTGCCCATCA
TGCAGGCCGTCCTGCTGTGCGAGTACTACGCGCGCTTCCGCGGCCGCAGCAAGGGCGCCTATCGCCCGTCGCCTC
GATTCAACGAGTTGTACCGAATGGTCAGTTGCCCAAGCCCTTCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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