Protein ID | Hirsu2|4875 |
Gene name | |
Location | Contig_2454:1112..2414 |
Strand | + |
Gene length (bp) | 1302 |
Transcript length (bp) | 1302 |
Coding sequence length (bp) | 1302 |
Protein length (aa) | 434 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00150 | Cellulase | Cellulase (glycosyl hydrolase family 5) | 5.1E-16 | 77 | 388 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P23548|GUN_PAEPO | Endoglucanase OS=Paenibacillus polymyxa PE=3 SV=2 | 47 | 427 | 1.0E-13 |
GO Term | Description | Terminal node |
---|---|---|
GO:0071704 | organic substance metabolic process | Yes |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | Yes |
GO:0016798 | hydrolase activity, acting on glycosyl bonds | No |
GO:0008152 | metabolic process | No |
GO:0003824 | catalytic activity | No |
GO:0008150 | biological_process | No |
GO:0016787 | hydrolase activity | No |
GO:0003674 | molecular_function | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.2144 | 0.1196 | 0.8156 | 0.1311 | 0.1853 | 0.1898 | 0.4196 | 0.3007 | 0.1633 | 0.007 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 23 | 0.999638 |
CAZyme category | E-value | Start | End |
---|---|---|---|
GH5_11 | 9.4E-111 | 47 | 387 |
Orthofinder run ID | 4 |
Orthogroup | 5309 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|4875 MKSAATSRLVALVCYACASLCLAVERTPPQPTADRPRLPLSASSRWIVDAAGQRVKLRCINWAGHLEANIPEGLH KKSVEHIADWIASQGFNCVRLTYSIDMARHQGVKVEDSFRRAAKATGADETAMMRLYAEAVKKNSFLVGSNGNAT VIDVFDRVQSALWDRGVMTILDNHVSRAGWCCDLTDGNGWWKDARFYMADNSRYFDTAEWRDGLATIATWSRSRP GIVGLSLRNELRASFSQIAFAAETWLSYMSPAARLVHDANPDALIIIGGINGGTDLSPLRTLAMMDLGPWAHKRV WEAHSYSFTVTTPNFGICSLLKAEYGGLYGFVLEQDKPYTGPLFLSEFGVGMTGGPRDGLSDKDARYLTCLVDYM SGNDADWSLWAIQGSYYVRDKVVDMNETWGALDHDWRDWRNPKFKAMLGKMVDMTQSP* |
Coding | >Hirsu2|4875 ATGAAGAGTGCCGCCACCTCTCGGCTCGTGGCTCTAGTCTGCTACGCGTGCGCCTCTTTGTGCCTTGCAGTGGAA AGAACGCCGCCACAACCGACGGCCGACAGACCTAGGCTTCCCCTGAGCGCCTCAAGCCGCTGGATTGTGGATGCG GCTGGACAACGCGTCAAGTTGCGATGCATCAACTGGGCCGGGCACCTCGAGGCCAACATCCCCGAGGGACTTCAC AAGAAATCAGTCGAGCACATTGCCGACTGGATCGCCTCCCAGGGCTTCAACTGCGTGCGCTTGACCTACTCGATC GACATGGCGCGCCATCAGGGCGTCAAGGTCGAAGACTCGTTCCGCAGGGCTGCCAAGGCCACGGGCGCGGACGAG ACGGCCATGATGCGGCTGTACGCCGAGGCCGTTAAAAAGAATTCCTTCCTGGTAGGCAGCAACGGCAATGCCACT GTTATCGATGTCTTCGACAGAGTTCAGTCGGCGCTCTGGGATCGTGGCGTAATGACCATACTCGACAACCACGTC AGTCGGGCGGGCTGGTGCTGTGATCTGACCGATGGCAACGGCTGGTGGAAGGACGCGCGCTTCTACATGGCCGAC AACAGCCGTTACTTTGACACCGCCGAGTGGCGCGATGGACTCGCCACCATTGCTACATGGTCCCGGTCGCGGCCT GGCATCGTAGGATTGTCGCTGCGTAACGAGCTTCGTGCCTCTTTTTCGCAAATCGCCTTCGCCGCCGAAACGTGG CTGAGCTACATGTCGCCGGCGGCCCGGTTGGTCCATGACGCCAACCCGGACGCTCTCATCATCATCGGTGGCATC AACGGCGGCACCGACCTGTCGCCACTGCGGACCCTGGCCATGATGGACTTGGGCCCCTGGGCCCACAAACGCGTG TGGGAGGCGCACAGTTATAGCTTCACCGTTACGACGCCCAACTTCGGCATCTGCTCGCTGCTCAAGGCTGAGTAC GGCGGCCTGTATGGCTTCGTCCTCGAGCAGGACAAGCCCTACACGGGGCCGCTCTTTCTATCCGAATTCGGCGTC GGAATGACCGGCGGCCCTCGCGACGGGCTATCCGATAAGGACGCCCGCTACCTGACTTGTCTCGTTGACTATATG TCGGGCAACGACGCTGACTGGTCGCTGTGGGCCATTCAGGGCTCCTACTACGTCCGCGATAAGGTCGTCGACATG AACGAGACTTGGGGGGCCCTCGATCACGACTGGCGTGACTGGCGAAACCCCAAGTTCAAGGCCATGCTTGGCAAG ATGGTGGATATGACCCAAAGTCCCTAA |
Transcript | >Hirsu2|4875 ATGAAGAGTGCCGCCACCTCTCGGCTCGTGGCTCTAGTCTGCTACGCGTGCGCCTCTTTGTGCCTTGCAGTGGAA AGAACGCCGCCACAACCGACGGCCGACAGACCTAGGCTTCCCCTGAGCGCCTCAAGCCGCTGGATTGTGGATGCG GCTGGACAACGCGTCAAGTTGCGATGCATCAACTGGGCCGGGCACCTCGAGGCCAACATCCCCGAGGGACTTCAC AAGAAATCAGTCGAGCACATTGCCGACTGGATCGCCTCCCAGGGCTTCAACTGCGTGCGCTTGACCTACTCGATC GACATGGCGCGCCATCAGGGCGTCAAGGTCGAAGACTCGTTCCGCAGGGCTGCCAAGGCCACGGGCGCGGACGAG ACGGCCATGATGCGGCTGTACGCCGAGGCCGTTAAAAAGAATTCCTTCCTGGTAGGCAGCAACGGCAATGCCACT GTTATCGATGTCTTCGACAGAGTTCAGTCGGCGCTCTGGGATCGTGGCGTAATGACCATACTCGACAACCACGTC AGTCGGGCGGGCTGGTGCTGTGATCTGACCGATGGCAACGGCTGGTGGAAGGACGCGCGCTTCTACATGGCCGAC AACAGCCGTTACTTTGACACCGCCGAGTGGCGCGATGGACTCGCCACCATTGCTACATGGTCCCGGTCGCGGCCT GGCATCGTAGGATTGTCGCTGCGTAACGAGCTTCGTGCCTCTTTTTCGCAAATCGCCTTCGCCGCCGAAACGTGG CTGAGCTACATGTCGCCGGCGGCCCGGTTGGTCCATGACGCCAACCCGGACGCTCTCATCATCATCGGTGGCATC AACGGCGGCACCGACCTGTCGCCACTGCGGACCCTGGCCATGATGGACTTGGGCCCCTGGGCCCACAAACGCGTG TGGGAGGCGCACAGTTATAGCTTCACCGTTACGACGCCCAACTTCGGCATCTGCTCGCTGCTCAAGGCTGAGTAC GGCGGCCTGTATGGCTTCGTCCTCGAGCAGGACAAGCCCTACACGGGGCCGCTCTTTCTATCCGAATTCGGCGTC GGAATGACCGGCGGCCCTCGCGACGGGCTATCCGATAAGGACGCCCGCTACCTGACTTGTCTCGTTGACTATATG TCGGGCAACGACGCTGACTGGTCGCTGTGGGCCATTCAGGGCTCCTACTACGTCCGCGATAAGGTCGTCGACATG AACGAGACTTGGGGGGCCCTCGATCACGACTGGCGTGACTGGCGAAACCCCAAGTTCAAGGCCATGCTTGGCAAG ATGGTGGATATGACCCAAAGTCCCTAA |
Gene | >Hirsu2|4875 ATGAAGAGTGCCGCCACCTCTCGGCTCGTGGCTCTAGTCTGCTACGCGTGCGCCTCTTTGTGCCTTGCAGTGGAA AGAACGCCGCCACAACCGACGGCCGACAGACCTAGGCTTCCCCTGAGCGCCTCAAGCCGCTGGATTGTGGATGCG GCTGGACAACGCGTCAAGTTGCGATGCATCAACTGGGCCGGGCACCTCGAGGCCAACATCCCCGAGGGACTTCAC AAGAAATCAGTCGAGCACATTGCCGACTGGATCGCCTCCCAGGGCTTCAACTGCGTGCGCTTGACCTACTCGATC GACATGGCGCGCCATCAGGGCGTCAAGGTCGAAGACTCGTTCCGCAGGGCTGCCAAGGCCACGGGCGCGGACGAG ACGGCCATGATGCGGCTGTACGCCGAGGCCGTTAAAAAGAATTCCTTCCTGGTAGGCAGCAACGGCAATGCCACT GTTATCGATGTCTTCGACAGAGTTCAGTCGGCGCTCTGGGATCGTGGCGTAATGACCATACTCGACAACCACGTC AGTCGGGCGGGCTGGTGCTGTGATCTGACCGATGGCAACGGCTGGTGGAAGGACGCGCGCTTCTACATGGCCGAC AACAGCCGTTACTTTGACACCGCCGAGTGGCGCGATGGACTCGCCACCATTGCTACATGGTCCCGGTCGCGGCCT GGCATCGTAGGATTGTCGCTGCGTAACGAGCTTCGTGCCTCTTTTTCGCAAATCGCCTTCGCCGCCGAAACGTGG CTGAGCTACATGTCGCCGGCGGCCCGGTTGGTCCATGACGCCAACCCGGACGCTCTCATCATCATCGGTGGCATC AACGGCGGCACCGACCTGTCGCCACTGCGGACCCTGGCCATGATGGACTTGGGCCCCTGGGCCCACAAACGCGTG TGGGAGGCGCACAGTTATAGCTTCACCGTTACGACGCCCAACTTCGGCATCTGCTCGCTGCTCAAGGCTGAGTAC GGCGGCCTGTATGGCTTCGTCCTCGAGCAGGACAAGCCCTACACGGGGCCGCTCTTTCTATCCGAATTCGGCGTC GGAATGACCGGCGGCCCTCGCGACGGGCTATCCGATAAGGACGCCCGCTACCTGACTTGTCTCGTTGACTATATG TCGGGCAACGACGCTGACTGGTCGCTGTGGGCCATTCAGGGCTCCTACTACGTCCGCGATAAGGTCGTCGACATG AACGAGACTTGGGGGGCCCTCGATCACGACTGGCGTGACTGGCGAAACCCCAAGTTCAAGGCCATGCTTGGCAAG ATGGTGGATATGACCCAAAGTCCCTAA |