Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4853
Gene name
LocationContig_2441:160..2177
Strand-
Gene length (bp)2017
Transcript length (bp)1860
Coding sequence length (bp)1860
Protein length (aa) 620

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10443 RNA12 RNA12 protein 4.4E-90 377 599
PF00076 RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 2.9E-05 216 271

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q2GUU0|YME2_CHAGB Mitochondrial escape protein 2 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=YME2 PE=3 SV=1 27 599 0.0E+00
sp|A4R1D5|YME2_MAGO7 Mitochondrial escape protein 2 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=YME2 PE=3 SV=2 1 599 0.0E+00
sp|Q873L8|YME2_NEUCR Mitochondrial escape protein 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=msp-45 PE=3 SV=2 48 599 0.0E+00
sp|A1D3P4|YME2_NEOFI Mitochondrial escape protein 2 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=yme2 PE=3 SV=2 50 598 7.0E-179
sp|Q4WJ38|YME2_ASPFU Mitochondrial escape protein 2 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=yme2 PE=3 SV=2 50 598 2.0E-176
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Swissprot ID Swissprot Description Start End E-value
sp|Q2GUU0|YME2_CHAGB Mitochondrial escape protein 2 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=YME2 PE=3 SV=1 27 599 0.0E+00
sp|A4R1D5|YME2_MAGO7 Mitochondrial escape protein 2 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=YME2 PE=3 SV=2 1 599 0.0E+00
sp|Q873L8|YME2_NEUCR Mitochondrial escape protein 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=msp-45 PE=3 SV=2 48 599 0.0E+00
sp|A1D3P4|YME2_NEOFI Mitochondrial escape protein 2 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=yme2 PE=3 SV=2 50 598 7.0E-179
sp|Q4WJ38|YME2_ASPFU Mitochondrial escape protein 2 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=yme2 PE=3 SV=2 50 598 2.0E-176
sp|B0XPV4|YME2_ASPFC Mitochondrial escape protein 2 OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=yme2 PE=3 SV=2 50 598 2.0E-176
sp|Q2UBI2|YME2_ASPOR Mitochondrial escape protein 2 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=yme2 PE=3 SV=1 60 598 3.0E-176
sp|Q0V3D6|YME2_PHANO Mitochondrial escape protein 2 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) GN=YME2 PE=3 SV=2 58 598 8.0E-171
sp|A2QPL8|YME2_ASPNC Mitochondrial escape protein 2 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=yme2 PE=3 SV=1 60 598 4.0E-170
sp|Q1E4N0|YME2_COCIM Mitochondrial escape protein 2 OS=Coccidioides immitis (strain RS) GN=YME2 PE=3 SV=1 47 599 2.0E-154
sp|Q751P7|YME2_ASHGO Mitochondrial escape protein 2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=YME2 PE=3 SV=1 70 619 6.0E-93
sp|Q6BKQ1|YME2_DEBHA Mitochondrial escape protein 2 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=YME2 PE=3 SV=2 67 598 3.0E-91
sp|Q6CTB6|YME2_KLULA Mitochondrial escape protein 2 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=YME2 PE=3 SV=1 48 598 5.0E-91
sp|Q6FIK2|YME2_CANGA Mitochondrial escape protein 2 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=YME2 PE=3 SV=1 48 599 8.0E-91
sp|A6ZN18|YME2_YEAS7 Mitochondrial escape protein 2 OS=Saccharomyces cerevisiae (strain YJM789) GN=YME2 PE=3 SV=1 23 599 4.0E-89
sp|A7TML0|YME2_VANPO Mitochondrial escape protein 2 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=YME2 PE=3 SV=1 48 595 1.0E-88
sp|P32843|YME2_YEAST Mitochondrial escape protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YME2 PE=1 SV=1 23 599 1.0E-86
sp|A5DAI1|YME2_PICGU Mitochondrial escape protein 2 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=YME2 PE=3 SV=2 11 599 4.0E-84
sp|O94689|YME2_SCHPO Mitochondrial escape protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yme2 PE=3 SV=1 62 591 4.0E-80
sp|A3M0D8|YME2_PICST Mitochondrial escape protein 2 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) GN=YME2 PE=3 SV=2 111 599 6.0E-76
sp|Q5A061|YME22_CANAL Mitochondrial escape protein 2-2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=YME22 PE=3 SV=1 69 587 3.0E-75
sp|Q5A089|YME21_CANAL Mitochondrial escape protein 2-1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=YME21 PE=3 SV=1 69 587 6.0E-74
sp|A5DSF0|YME2_LODEL Mitochondrial escape protein 2 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=YME2 PE=3 SV=1 130 593 5.0E-73
sp|Q54K38|YME2_DICDI Mitochondrial escape protein 2 homolog OS=Dictyostelium discoideum GN=yme2 PE=3 SV=1 57 582 2.0E-38
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GO

GO Term Description Terminal node
GO:0003723 RNA binding Yes
GO:0097159 organic cyclic compound binding No
GO:0005488 binding No
GO:1901363 heterocyclic compound binding No
GO:0003676 nucleic acid binding No
GO:0003674 molecular_function No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Mitochondrion Mitochondrial transit peptide 0.1032 0.0739 0.0669 0.0571 0.7639 0.1307 0.2449 0.1 0.1566 0.045

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2908
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2244
Ophiocordyceps australis map64 (Brazil) OphauB2|6508
Ophiocordyceps camponoti-floridani Ophcf2|06601
Ophiocordyceps camponoti-rufipedis Ophun1|5422
Ophiocordyceps kimflemingae Ophio5|233
Ophiocordyceps subramaniannii Hirsu2|4853 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4853
MIPLRCSAAAPSLRLSMRAALTSRPRGPCLAGGVGAWRRRAVGPAVFRAWESTAVTEEKESGHFSVKANQSLLFF
DNLFPIKLSAILRLPSETDRDLAGLLRRFDSSSLGILDPIRLVKRAIPDELPLRVLEIVPRLKDGGAFVKIEYEA
GVDPAEIEGSLLRKLEQRPLKPWFSPFRGIKARLVRGTPWLEDLYRFPSPVVRAEFVAAGAGEAAELSEETLYGL
FRRFGKIADIVPQAWDSKETPRHARIAFPRIRDAIMARNCLHGFVVPEAMGGGRGGTVLRLAYVKRVKAHSIWNW
LTSHPRIVVPVAAALLAGFSVIVFDPIRKFFVRAHVQHSLRFTESRLYQWFKSRAGGLSLGRKTERLEGLGAVWN
HRRDLIGKLQGWLDGSSDTFIVVTGPRGSGKREMVLDQALAGRGNVLVVDCRPIADASGEAGTIKRLGGAVGYRP
IFSWANSVSSMIDLAVQSTTGVKAGFSENLEAQVGKILHTTAAALKEVALAGRSSRDKDAALSEDAFLDAHPERR
PVVVIDNFLHRNEDKALVYDRLADWAASLVQNKVAHVVFLTSESAYAKPLSRAMPDRVFRALSLDDLSHDVAKNG
GAAPTWPAWTPASRRWAAG*
Coding >Hirsu2|4853
ATGATTCCGCTGCGATGCTCGGCGGCGGCTCCGTCGCTGCGCCTGAGCATGCGAGCCGCCCTCACCTCGAGGCCG
CGGGGGCCGTGTCTCGCGGGCGGCGTCGGTGCTTGGCGCCGGCGGGCCGTCGGCCCTGCTGTCTTCCGGGCGTGG
GAGAGCACGGCGGTTACGGAGGAAAAGGAGAGCGGCCATTTCTCCGTCAAGGCCAACCAGTCGCTCTTGTTCTTT
GACAATCTCTTCCCCATCAAGCTGAGCGCTATACTCCGACTGCCGTCCGAGACGGACCGAGATCTCGCCGGTCTG
CTCCGGCGGTTCGACAGCTCGTCGCTCGGCATCCTGGACCCAATCCGGCTGGTCAAGCGGGCGATCCCGGACGAG
CTGCCGCTCAGGGTACTGGAGATTGTACCGCGGCTCAAGGACGGCGGGGCCTTCGTCAAGATCGAGTACGAGGCG
GGCGTGGACCCGGCCGAGATCGAGGGCTCGCTACTGCGGAAGCTGGAGCAGCGGCCGCTCAAGCCGTGGTTCAGC
CCGTTCCGCGGCATCAAGGCGCGGCTGGTGCGCGGAACGCCCTGGCTCGAGGACCTGTACCGCTTCCCGTCGCCC
GTCGTGCGGGCCGAGTTCGTGGCGGCGGGCGCGGGCGAGGCGGCCGAGCTGTCGGAGGAGACGCTGTACGGCCTG
TTCCGGCGGTTCGGCAAGATCGCCGACATCGTGCCGCAGGCGTGGGACTCCAAGGAGACGCCGCGGCACGCGCGC
ATCGCCTTCCCGCGGATCCGCGACGCCATCATGGCGCGCAACTGCCTGCACGGCTTCGTCGTGCCCGAGGCCATG
GGCGGCGGCCGCGGCGGGACGGTGCTGCGGCTGGCGTACGTCAAGCGCGTCAAGGCGCACAGCATATGGAACTGG
CTGACGAGCCACCCGCGGATCGTGGTCCCCGTCGCGGCCGCGCTGCTCGCCGGCTTCTCCGTCATCGTCTTCGAC
CCGATCCGCAAGTTCTTCGTGCGGGCGCACGTGCAGCACTCGCTGCGCTTCACCGAGTCGCGCCTGTACCAATGG
TTCAAGTCGCGCGCCGGCGGCCTCAGCCTCGGCCGCAAGACGGAGCGCCTGGAGGGCTTGGGCGCGGTGTGGAAC
CACCGGCGCGACCTCATCGGCAAGCTGCAGGGCTGGCTGGACGGCAGCTCGGACACCTTCATCGTCGTCACGGGC
CCGCGCGGCTCGGGCAAGCGGGAGATGGTGCTGGACCAGGCGCTGGCGGGCCGCGGCAACGTGCTCGTCGTCGAC
TGCCGGCCCATCGCCGACGCCAGCGGCGAGGCCGGCACCATCAAGCGGCTGGGCGGCGCCGTCGGCTACCGACCC
ATCTTCTCCTGGGCCAACAGCGTCAGCAGCATGATCGACCTGGCGGTGCAGAGCACGACCGGCGTCAAGGCCGGC
TTCTCCGAGAACCTGGAGGCGCAGGTCGGCAAGATCCTGCACACGACGGCCGCCGCGCTCAAGGAGGTGGCCCTG
GCCGGCCGCTCGAGTCGCGACAAGGACGCGGCGCTGTCGGAGGACGCCTTCCTCGACGCGCACCCCGAGCGGCGG
CCCGTCGTCGTCATCGACAACTTCCTGCACCGGAACGAGGACAAGGCGCTCGTCTACGACCGGCTGGCCGACTGG
GCCGCGTCGCTGGTGCAGAACAAGGTCGCCCACGTCGTCTTCCTGACGAGCGAGTCGGCCTACGCGAAGCCGCTG
TCGAGGGCGATGCCCGACCGCGTCTTCCGCGCCCTCTCGCTCGACGACCTCAGCCACGACGTGGCCAAGAACGGC
GGCGCGGCCCCGACCTGGCCGGCCTGGACGCCTGCATCGAGACGCTGGGCGGCCGGCTGA
Transcript >Hirsu2|4853
ATGATTCCGCTGCGATGCTCGGCGGCGGCTCCGTCGCTGCGCCTGAGCATGCGAGCCGCCCTCACCTCGAGGCCG
CGGGGGCCGTGTCTCGCGGGCGGCGTCGGTGCTTGGCGCCGGCGGGCCGTCGGCCCTGCTGTCTTCCGGGCGTGG
GAGAGCACGGCGGTTACGGAGGAAAAGGAGAGCGGCCATTTCTCCGTCAAGGCCAACCAGTCGCTCTTGTTCTTT
GACAATCTCTTCCCCATCAAGCTGAGCGCTATACTCCGACTGCCGTCCGAGACGGACCGAGATCTCGCCGGTCTG
CTCCGGCGGTTCGACAGCTCGTCGCTCGGCATCCTGGACCCAATCCGGCTGGTCAAGCGGGCGATCCCGGACGAG
CTGCCGCTCAGGGTACTGGAGATTGTACCGCGGCTCAAGGACGGCGGGGCCTTCGTCAAGATCGAGTACGAGGCG
GGCGTGGACCCGGCCGAGATCGAGGGCTCGCTACTGCGGAAGCTGGAGCAGCGGCCGCTCAAGCCGTGGTTCAGC
CCGTTCCGCGGCATCAAGGCGCGGCTGGTGCGCGGAACGCCCTGGCTCGAGGACCTGTACCGCTTCCCGTCGCCC
GTCGTGCGGGCCGAGTTCGTGGCGGCGGGCGCGGGCGAGGCGGCCGAGCTGTCGGAGGAGACGCTGTACGGCCTG
TTCCGGCGGTTCGGCAAGATCGCCGACATCGTGCCGCAGGCGTGGGACTCCAAGGAGACGCCGCGGCACGCGCGC
ATCGCCTTCCCGCGGATCCGCGACGCCATCATGGCGCGCAACTGCCTGCACGGCTTCGTCGTGCCCGAGGCCATG
GGCGGCGGCCGCGGCGGGACGGTGCTGCGGCTGGCGTACGTCAAGCGCGTCAAGGCGCACAGCATATGGAACTGG
CTGACGAGCCACCCGCGGATCGTGGTCCCCGTCGCGGCCGCGCTGCTCGCCGGCTTCTCCGTCATCGTCTTCGAC
CCGATCCGCAAGTTCTTCGTGCGGGCGCACGTGCAGCACTCGCTGCGCTTCACCGAGTCGCGCCTGTACCAATGG
TTCAAGTCGCGCGCCGGCGGCCTCAGCCTCGGCCGCAAGACGGAGCGCCTGGAGGGCTTGGGCGCGGTGTGGAAC
CACCGGCGCGACCTCATCGGCAAGCTGCAGGGCTGGCTGGACGGCAGCTCGGACACCTTCATCGTCGTCACGGGC
CCGCGCGGCTCGGGCAAGCGGGAGATGGTGCTGGACCAGGCGCTGGCGGGCCGCGGCAACGTGCTCGTCGTCGAC
TGCCGGCCCATCGCCGACGCCAGCGGCGAGGCCGGCACCATCAAGCGGCTGGGCGGCGCCGTCGGCTACCGACCC
ATCTTCTCCTGGGCCAACAGCGTCAGCAGCATGATCGACCTGGCGGTGCAGAGCACGACCGGCGTCAAGGCCGGC
TTCTCCGAGAACCTGGAGGCGCAGGTCGGCAAGATCCTGCACACGACGGCCGCCGCGCTCAAGGAGGTGGCCCTG
GCCGGCCGCTCGAGTCGCGACAAGGACGCGGCGCTGTCGGAGGACGCCTTCCTCGACGCGCACCCCGAGCGGCGG
CCCGTCGTCGTCATCGACAACTTCCTGCACCGGAACGAGGACAAGGCGCTCGTCTACGACCGGCTGGCCGACTGG
GCCGCGTCGCTGGTGCAGAACAAGGTCGCCCACGTCGTCTTCCTGACGAGCGAGTCGGCCTACGCGAAGCCGCTG
TCGAGGGCGATGCCCGACCGCGTCTTCCGCGCCCTCTCGCTCGACGACCTCAGCCACGACGTGGCCAAGAACGGC
GGCGCGGCCCCGACCTGGCCGGCCTGGACGCCTGCATCGAGACGCTGGGCGGCCGGCTGA
Gene >Hirsu2|4853
ATGATTCCGCTGCGATGCTCGGCGGCGGCTCCGTCGCTGCGCCTGAGCATGCGAGCCGCCCTCACCTCGAGGCCG
CGGGGGCCGTGTCTCGCGGGCGGCGTCGGTGCTTGGCGCCGGCGGGCCGTCGGCCCTGCTGTCTTCCGGGCGTGG
GAGAGCACGGCGGTTACGGAGGAAAAGGAGAGCGGCCATTTCTCCGTCAAGGCCAACCAGTCGCTCTTGTTCTTT
GACAGTAAGTTACTCGCCACCTTCCCTCTCGCCGTGGCTGTGAAATGAACCGCTGCTGATCGGCGTGGCCGCGTG
CCAGATCTCTTCCCCATCAAGCTGAGCGCTATACTCCGACTGCCGTCCGAGACGGACCGAGATCTCGCCGGTCTG
CTCCGGCGGTTCGACAGCTCGTCGCTCGGCATCCTGGACCCAATCCGGCTGGTCAAGCGGGCGATCCCGGACGAG
CTGCCGCTCAGGGTACTGGAGATTGTACCGCGGCTCAAGGACGGCGGGGCCTTCGTCAAGATCGAGTACGAGGCG
GGCGTGGACCCGGCCGAGATCGAGGGCTCGCTACTGCGGAAGCTGGAGCAGCGGCCGCTCAAGCCGTGGTTCAGC
CCGTTCCGCGGCATCAAGGCGCGGCTGGTGCGCGGAACGCCCTGGCTCGAGGACCTGTACCGCTTCCCGTCGCCC
GTCGTGCGGGCCGAGTTCGTGGCGGCGGGCGCGGGCGAGGCGGCCGAGCTGTCGGAGGAGACGCTGTACGGCCTG
TTCCGGCGGTTCGGCAAGATCGCCGACATCGTGCCGCAGGCGTGGGACTCCAAGGAGACGCCGCGGCACGCGCGC
ATCGCCTTCCCGCGGATCCGCGACGCCATCATGGCGCGCAACTGCCTGCACGGCTTCGTCGTGCCCGAGGCCATG
GGCGGCGGCCGCGGCGGGACGGTGCTGCGGCTGGCGTACGTCAAGCGCGTCAAGGCGCACAGCATATGGAACTGG
CTGACGAGCCACCCGCGGATCGTGGTCCCCGTCGCGGCCGCGCTGCTCGCCGGCTTCTCCGTCATCGTCTTCGAC
CCGATCCGCAAGTTCTTCGTGCGGGCGCACGTGCAGCACTCGCTGCGCTTCACCGAGTCGCGCCTGTACCAATGG
TTCAAGTCGCGCGCCGGCGGCCTCAGCCTCGGCCGCAAGACGGAGCGCCTGGAGGGCTTGGGCGCGGTGTGGAAC
CACCGGCGCGACCTCATCGGCAAGCTGCAGGGCTGGCTGGACGGCAGCTCGGACACCTTCATCGTCGTCACGGGC
CCGCGCGGCTCGGGCAAGCGGGAGATGGTGCTGGACCAGGCGCTGGCGGGCCGCGGCAACGTGCTCGTCGTCGAC
TGCCGGCCCATCGCCGACGCCAGCGGCGAGGCCGGCACCATCAAGCGGCTGGGCGGCGCCGTCGGCTACCGACCC
ATCTTCTCCTGGGCCAACAGCGTCAGCAGCATGATCGACCTGGCGGTGCAGAGCACGACCGGCGTCAAGGCCGGC
TTCTCCGAGAACCTGGAGGCGCAGGTCGGCAAGATCCTGCACACGACGGCCGCCGCGCTCAAGGAGGTGGCCCTG
GCCGGCCGCTCGAGTCGCGACAAGGACGCGGCGCTGTCGGAGGACGCCTTCCTCGACGCGCACCCCGAGCGGCGG
CCCGTCGTCGTCATCGACAACTTCCTGCACCGGAACGAGGACAAGGCGCTCGTCTACGACCGGCTGGCCGACTGG
GCCGCGTCGCTGGTGCAGAACAAGGTCGCCCACGTCGTCTTCCTGACGAGCGAGTCGGCCTACGCGAAGCCGCTG
TCGAGGGCGATGCCCGACCGCGTCTTCCGCGCCCTCTCGCTCGACGACCTCAGCCACGACGTGGCCAAGAAGTTC
GTCCTCAGCAGGCTCCAGGACGACGCCGACGCCGACGACAGCCGACGGCCCGGGGCGGTGGCGGCGGCGGGCGAG
AAGCGGCGGCGCGGCCCCGACCTGGCCGGCCTGGACGCCTGCATCGAGACGCTGGGCGGCCGGCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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