Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4850
Gene name
LocationContig_244:23695..24597
Strand+
Gene length (bp)902
Transcript length (bp)822
Coding sequence length (bp)822
Protein length (aa) 274

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1747 0.0748 0.8881 0.1041 0.0617 0.029 0.3457 0.1512 0.2172 0.0035

SignalP

SignalP signal predicted Location Score
Yes 1 - 25 0.999743

Transmembrane Domains

Domain # Start End Length
1 7 29 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup9733
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|4850 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4850
MYKSLTILAIAVVFLLLLSSESCQAAPVGGLGNIFRFGGNSSPTWGISGAGPSGHGLVQDSVIRRLPKLPGETVP
PENRHAVYGGIPSTDVRGKPRRPENRHAIHGGIPATNIRKSDFGTASRDSTERRKGTPMVSKEIDHVYNEPDAPV
NARAGQSSPDRDVWRENSLYMGGKSSPGRDIWRENSLYMGGKSSPGRDSWRENSLYTAGKSSPGRDIWRENSLYM
GGKSSPGRDVRKTQANPTFPIDVSSRSDAERAPGGLLSAGRAPFRSKD*
Coding >Hirsu2|4850
ATGTACAAGTCCTTGACCATTCTAGCCATCGCAGTTGTATTCCTTCTGCTCCTGTCGTCGGAGAGCTGTCAAGCT
GCCCCAGTCGGTGGGCTTGGAAACATCTTTCGCTTTGGAGGCAACAGCTCGCCCACATGGGGTATATCCGGCGCC
GGCCCATCTGGTCATGGACTTGTCCAGGACAGTGTCATAAGACGCCTGCCTAAGCTCCCTGGCGAAACAGTTCCG
CCGGAGAACAGGCACGCCGTCTATGGAGGGATCCCTTCCACAGATGTCCGCGGCAAACCACGCCGACCCGAGAAC
AGGCACGCCATCCATGGAGGGATTCCTGCTACAAATATCCGCAAGTCTGATTTCGGAACTGCCTCACGGGATAGT
ACGGAGCGGCGCAAAGGCACTCCTATGGTGTCTAAAGAGATCGATCATGTGTACAACGAACCTGACGCGCCTGTG
AACGCAAGGGCGGGACAATCTTCGCCAGACCGCGATGTCTGGAGAGAAAACAGCCTCTATATGGGGGGGAAATCT
TCCCCAGGCCGCGATATCTGGAGAGAAAACAGCCTCTATATGGGGGGGAAATCTTCCCCAGGCCGCGATTCCTGG
AGGGAAAACAGCCTCTACACGGCGGGAAAATCTTCCCCAGGCCGCGATATTTGGAGAGAAAACAGCCTCTATATG
GGGGGAAAGTCTTCGCCAGGCCGCGACGTCAGGAAGACACAAGCAAATCCTACCTTCCCTATCGACGTTTCTTCT
AGGTCCGACGCTGAACGTGCACCGGGCGGTCTTTTAAGTGCCGGTAGAGCTCCTTTCAGGAGCAAGGACTAG
Transcript >Hirsu2|4850
ATGTACAAGTCCTTGACCATTCTAGCCATCGCAGTTGTATTCCTTCTGCTCCTGTCGTCGGAGAGCTGTCAAGCT
GCCCCAGTCGGTGGGCTTGGAAACATCTTTCGCTTTGGAGGCAACAGCTCGCCCACATGGGGTATATCCGGCGCC
GGCCCATCTGGTCATGGACTTGTCCAGGACAGTGTCATAAGACGCCTGCCTAAGCTCCCTGGCGAAACAGTTCCG
CCGGAGAACAGGCACGCCGTCTATGGAGGGATCCCTTCCACAGATGTCCGCGGCAAACCACGCCGACCCGAGAAC
AGGCACGCCATCCATGGAGGGATTCCTGCTACAAATATCCGCAAGTCTGATTTCGGAACTGCCTCACGGGATAGT
ACGGAGCGGCGCAAAGGCACTCCTATGGTGTCTAAAGAGATCGATCATGTGTACAACGAACCTGACGCGCCTGTG
AACGCAAGGGCGGGACAATCTTCGCCAGACCGCGATGTCTGGAGAGAAAACAGCCTCTATATGGGGGGGAAATCT
TCCCCAGGCCGCGATATCTGGAGAGAAAACAGCCTCTATATGGGGGGGAAATCTTCCCCAGGCCGCGATTCCTGG
AGGGAAAACAGCCTCTACACGGCGGGAAAATCTTCCCCAGGCCGCGATATTTGGAGAGAAAACAGCCTCTATATG
GGGGGAAAGTCTTCGCCAGGCCGCGACGTCAGGAAGACACAAGCAAATCCTACCTTCCCTATCGACGTTTCTTCT
AGGTCCGACGCTGAACGTGCACCGGGCGGTCTTTTAAGTGCCGGTAGAGCTCCTTTCAGGAGCAAGGACTAG
Gene >Hirsu2|4850
ATGTACAAGTCCTTGACCATTCTAGCCATCGCAGTTGTATTCCTTCTGCTCCTGTCGTCGGAGAGCTGTCAAGCT
GCCCCAGTCGGTGGGCTTGGAAACATCTTTCGCTTTGGAGGCAACAGCTCGCCCACATGGGGTATATCCGGCGCC
GGCCCATCTGGTCATGGACTTGTCCAGGACAGTGTCATAAGACGCCTGCCTAAGCTCCCTGGCGAAACAGTTCCG
CCGGAGAACAGGCACGCCGTCTATGGAGGGATCCCTTCCACAGATGTCCGCGGCAAACCACGCCGACCCGAGAAC
AGGCACGCCATCCATGGAGGGATTCCTGCTACAAATATCCGCAAGTCTGATTTCGGAACTGCCTCACGGGATAGT
ACGGAGCGGCGCAAAGGCACTCCTATGGTGTCTAAAGAGGTAAGATATGACATGAACTTAGATAGAAGACGTGCT
TGCCTCCAGCCGAGACTTCCATCACTGACCTCTTCCCGTTCTAGATCGATCATGTGTACAACGAACCTGACGCGC
CTGTGAACGCAAGGGCGGGACAATCTTCGCCAGACCGCGATGTCTGGAGAGAAAACAGCCTCTATATGGGGGGGA
AATCTTCCCCAGGCCGCGATATCTGGAGAGAAAACAGCCTCTATATGGGGGGGAAATCTTCCCCAGGCCGCGATT
CCTGGAGGGAAAACAGCCTCTACACGGCGGGAAAATCTTCCCCAGGCCGCGATATTTGGAGAGAAAACAGCCTCT
ATATGGGGGGAAAGTCTTCGCCAGGCCGCGACGTCAGGAAGACACAAGCAAATCCTACCTTCCCTATCGACGTTT
CTTCTAGGTCCGACGCTGAACGTGCACCGGGCGGTCTTTTAAGTGCCGGTAGAGCTCCTTTCAGGAGCAAGGACT
AG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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