Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4843
Gene name
LocationContig_244:2858..4887
Strand+
Gene length (bp)2029
Transcript length (bp)1785
Coding sequence length (bp)1785
Protein length (aa) 595

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00651 BTB BTB/POZ domain 4.5E-08 146 241
PF00651 BTB BTB/POZ domain 4.4E-10 342 425
PF13637 Ank_4 Ankyrin repeats (many copies) 2.1E-08 41 88
PF12796 Ank_2 Ankyrin repeats (3 copies) 1.4E-06 41 92
PF00023 Ank Ankyrin repeat 1.3E-02 69 93

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q10225|BTB3_SCHPO BTB/POZ domain-containing protein 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=btb3 PE=1 SV=1 2 542 2.0E-77
sp|P40560|YIA1_YEAST Ankyrin repeat-containing protein YIL001W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL001W PE=1 SV=1 36 538 7.0E-63
sp|Q99LJ2|ABTB1_MOUSE Ankyrin repeat and BTB/POZ domain-containing protein 1 OS=Mus musculus GN=Abtb1 PE=2 SV=1 38 526 1.0E-37
sp|Q5XIU1|ABTB1_RAT Ankyrin repeat and BTB/POZ domain-containing protein 1 OS=Rattus norvegicus GN=Abtb1 PE=2 SV=1 38 526 3.0E-37
sp|Q969K4|ABTB1_HUMAN Ankyrin repeat and BTB/POZ domain-containing protein 1 OS=Homo sapiens GN=ABTB1 PE=1 SV=1 38 526 4.0E-35
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Swissprot ID Swissprot Description Start End E-value
sp|Q10225|BTB3_SCHPO BTB/POZ domain-containing protein 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=btb3 PE=1 SV=1 2 542 2.0E-77
sp|P40560|YIA1_YEAST Ankyrin repeat-containing protein YIL001W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL001W PE=1 SV=1 36 538 7.0E-63
sp|Q99LJ2|ABTB1_MOUSE Ankyrin repeat and BTB/POZ domain-containing protein 1 OS=Mus musculus GN=Abtb1 PE=2 SV=1 38 526 1.0E-37
sp|Q5XIU1|ABTB1_RAT Ankyrin repeat and BTB/POZ domain-containing protein 1 OS=Rattus norvegicus GN=Abtb1 PE=2 SV=1 38 526 3.0E-37
sp|Q969K4|ABTB1_HUMAN Ankyrin repeat and BTB/POZ domain-containing protein 1 OS=Homo sapiens GN=ABTB1 PE=1 SV=1 38 526 4.0E-35
sp|Q9SJ85|Y2474_ARATH BTB/POZ domain-containing protein At2g04740 OS=Arabidopsis thaliana GN=At2g04740 PE=2 SV=2 29 311 2.0E-16
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GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0003674 molecular_function No
GO:0005488 binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 41 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4843
MVLRKHELEGKLGEEQQMIKSGVLRDENPLDQSPEFDEFLVACRHGDLRKCQELINLGVNINAKDKFDYTPLIIA
SLCGHYELVQLLLESGALAERNTFQGERCIYNALNDRIRNLLLQYDFSKTSDPYVYWSTHISGLLSRTRPPTSDI
SVVAGPRSFDLHKFLLASRTPYFRRKLEAQPETSTWTLPPSVAPEALQIALRYVYLGELPRDLVPPGSSASEEDV
ARGLDRISKQLGLDRLWEAMVAGGDDRRLARQRYQDEEARALGQVRDFFRANVLGRKVVVDRARVADVRYGHDNP
AFADVVLRADEPDDGPPPPPAALNGQGIPTGFAAEGRTSVLYPAHKAMLIRSDYFARMFSGDFVEAQPSAHLRVV
TVDCAPAVLELVLAFLYADEAGCPLEHALDLLYAADMLFLDGLKNKAAVAISTLGSGAGGTLVDRSRRPRHDGRP
EPELEPINIYDVIHAAWDLRVRRLEEFAARYLAARLEDYVDDADFHDLIRESAARLRRREETDTIELLDDVRYYL
SERFRLRFEDAGLDDVMADPAAADPAADPAALDPAAAAAADDDFASDAVNYHLLLGKIDAMLDRLKLDA*
Coding >Hirsu2|4843
ATGGTTCTGCGCAAGCATGAACTCGAGGGTAAGCTGGGTGAGGAGCAGCAAATGATCAAAAGCGGCGTGCTTCGG
GACGAAAATCCTCTCGATCAGAGCCCCGAATTCGACGAGTTCCTCGTTGCCTGTCGTCACGGAGACCTGCGCAAG
TGCCAGGAGCTGATCAACCTGGGCGTCAACATCAACGCCAAGGACAAGTTCGACTACACGCCACTCATCATCGCC
AGTCTCTGTGGGCATTATGAGCTTGTGCAGCTGCTACTGGAATCGGGTGCTCTGGCGGAGAGGAACACGTTCCAG
GGGGAGCGGTGCATCTACAACGCGCTCAACGACCGGATACGCAACCTGCTGCTGCAGTACGACTTCTCCAAGACG
TCGGACCCCTACGTCTACTGGTCCACGCACATCTCCGGCCTCCTGAGCCGGACTCGGCCGCCGACGTCGGACATC
TCCGTCGTGGCCGGCCCGCGCAGCTTCGACCTGCACAAGTTCCTGCTCGCGTCCCGGACGCCCTACTTCCGGAGG
AAGCTCGAGGCCCAGCCGGAGACGTCGACGTGGACGCTGCCGCCGTCGGTCGCGCCCGAGGCCCTCCAGATCGCC
CTGCGCTACGTCTACCTGGGCGAGCTGCCCCGGGACCTGGTCCCGCCGGGCAGCTCGGCCTCGGAGGAGGACGTG
GCCCGGGGCCTGGACCGGATCAGCAAGCAGCTCGGCCTCGACCGGCTCTGGGAGGCCATGGTGGCCGGCGGCGAC
GACCGCCGGCTGGCCCGGCAGCGGTACCAGGACGAGGAGGCGCGCGCGCTCGGCCAGGTGCGCGACTTCTTCCGC
GCCAACGTCCTCGGCCGCAAGGTGGTGGTGGACAGGGCGCGCGTGGCCGACGTCCGCTACGGCCACGACAACCCG
GCCTTCGCCGACGTCGTGCTCCGGGCCGACGAGCCCGACGACGGCCCGCCCCCGCCGCCCGCCGCCCTCAACGGC
CAGGGCATCCCGACCGGCTTCGCGGCGGAAGGGCGGACGTCGGTCCTGTACCCGGCGCACAAGGCGATGCTCATC
CGCAGCGACTACTTCGCCCGCATGTTCTCGGGCGACTTCGTCGAGGCCCAGCCGTCGGCGCACCTGCGCGTCGTC
ACCGTCGACTGCGCGCCCGCCGTGCTCGAGCTCGTCCTCGCCTTCCTCTACGCCGACGAGGCCGGCTGCCCGCTC
GAGCACGCCCTCGACCTGCTCTACGCCGCCGACATGCTCTTCCTCGACGGCCTCAAGAACAAGGCGGCCGTGGCG
ATCAGCACGCTCGGCAGCGGCGCCGGCGGCACCCTCGTCGACCGCTCCCGCCGCCCCCGCCACGACGGCCGGCCC
GAGCCCGAGCTCGAGCCCATCAACATCTACGACGTCATCCACGCCGCCTGGGACCTGCGCGTCCGCCGCCTCGAG
GAGTTCGCCGCCCGCTACCTCGCCGCCCGCCTCGAGGACTACGTCGACGACGCCGACTTCCACGACCTGATCCGC
GAGAGCGCCGCCCGCCTGCGCCGCCGCGAGGAGACGGACACCATCGAGCTGCTCGACGACGTCCGCTACTACCTG
TCGGAGCGCTTCCGCCTGCGCTTCGAGGACGCCGGCCTCGACGACGTCATGGCCGATCCCGCCGCCGCCGACCCC
GCCGCCGATCCCGCCGCCCTCGACCCCGCCGCCGCCGCCGCCGCCGACGACGACTTCGCCTCCGACGCCGTCAAC
TACCACCTCCTGCTCGGCAAGATCGACGCCATGCTCGACCGCCTCAAGCTCGACGCCTGA
Transcript >Hirsu2|4843
ATGGTTCTGCGCAAGCATGAACTCGAGGGTAAGCTGGGTGAGGAGCAGCAAATGATCAAAAGCGGCGTGCTTCGG
GACGAAAATCCTCTCGATCAGAGCCCCGAATTCGACGAGTTCCTCGTTGCCTGTCGTCACGGAGACCTGCGCAAG
TGCCAGGAGCTGATCAACCTGGGCGTCAACATCAACGCCAAGGACAAGTTCGACTACACGCCACTCATCATCGCC
AGTCTCTGTGGGCATTATGAGCTTGTGCAGCTGCTACTGGAATCGGGTGCTCTGGCGGAGAGGAACACGTTCCAG
GGGGAGCGGTGCATCTACAACGCGCTCAACGACCGGATACGCAACCTGCTGCTGCAGTACGACTTCTCCAAGACG
TCGGACCCCTACGTCTACTGGTCCACGCACATCTCCGGCCTCCTGAGCCGGACTCGGCCGCCGACGTCGGACATC
TCCGTCGTGGCCGGCCCGCGCAGCTTCGACCTGCACAAGTTCCTGCTCGCGTCCCGGACGCCCTACTTCCGGAGG
AAGCTCGAGGCCCAGCCGGAGACGTCGACGTGGACGCTGCCGCCGTCGGTCGCGCCCGAGGCCCTCCAGATCGCC
CTGCGCTACGTCTACCTGGGCGAGCTGCCCCGGGACCTGGTCCCGCCGGGCAGCTCGGCCTCGGAGGAGGACGTG
GCCCGGGGCCTGGACCGGATCAGCAAGCAGCTCGGCCTCGACCGGCTCTGGGAGGCCATGGTGGCCGGCGGCGAC
GACCGCCGGCTGGCCCGGCAGCGGTACCAGGACGAGGAGGCGCGCGCGCTCGGCCAGGTGCGCGACTTCTTCCGC
GCCAACGTCCTCGGCCGCAAGGTGGTGGTGGACAGGGCGCGCGTGGCCGACGTCCGCTACGGCCACGACAACCCG
GCCTTCGCCGACGTCGTGCTCCGGGCCGACGAGCCCGACGACGGCCCGCCCCCGCCGCCCGCCGCCCTCAACGGC
CAGGGCATCCCGACCGGCTTCGCGGCGGAAGGGCGGACGTCGGTCCTGTACCCGGCGCACAAGGCGATGCTCATC
CGCAGCGACTACTTCGCCCGCATGTTCTCGGGCGACTTCGTCGAGGCCCAGCCGTCGGCGCACCTGCGCGTCGTC
ACCGTCGACTGCGCGCCCGCCGTGCTCGAGCTCGTCCTCGCCTTCCTCTACGCCGACGAGGCCGGCTGCCCGCTC
GAGCACGCCCTCGACCTGCTCTACGCCGCCGACATGCTCTTCCTCGACGGCCTCAAGAACAAGGCGGCCGTGGCG
ATCAGCACGCTCGGCAGCGGCGCCGGCGGCACCCTCGTCGACCGCTCCCGCCGCCCCCGCCACGACGGCCGGCCC
GAGCCCGAGCTCGAGCCCATCAACATCTACGACGTCATCCACGCCGCCTGGGACCTGCGCGTCCGCCGCCTCGAG
GAGTTCGCCGCCCGCTACCTCGCCGCCCGCCTCGAGGACTACGTCGACGACGCCGACTTCCACGACCTGATCCGC
GAGAGCGCCGCCCGCCTGCGCCGCCGCGAGGAGACGGACACCATCGAGCTGCTCGACGACGTCCGCTACTACCTG
TCGGAGCGCTTCCGCCTGCGCTTCGAGGACGCCGGCCTCGACGACGTCATGGCCGATCCCGCCGCCGCCGACCCC
GCCGCCGATCCCGCCGCCCTCGACCCCGCCGCCGCCGCCGCCGCCGACGACGACTTCGCCTCCGACGCCGTCAAC
TACCACCTCCTGCTCGGCAAGATCGACGCCATGCTCGACCGCCTCAAGCTCGACGCCTGA
Gene >Hirsu2|4843
ATGGTTCTGCGCAAGCATGAACTCGAGGGTAAGCTGGGTGAGGAGCAGCAAATGATCAAAAGCGGCGTGCTTCGG
GACGAAAATCCTCTCGATCAGAGCCCCGAATTCGACGAGTTCCTCGTTGCCTGTCGTCACGGAGACCTGCGCAAG
TGCCAGGAGCTGATCAACCTGGGCGTCAACATCAACGCCAAGGACAAGTTCGACTACACGCCACTCATCATCGTA
AGCCGCCTGCCGTCGGATATCTCGCCACAGCACCGCCCAGCGGAGCTGACCAGTCGCGGAGCAGGCCAGTCTCTG
TGGGCATTATGAGCTTGTGCAGCTGCTACTGGAATCGGGTATGGCTTTGCTCAACCCCCCCCCCCCCCCTTCTTG
TCCCCAATCCTTGCCAGCAGAAGCGACGGCACACTACTCAACCGCGGCCATCGCGACGTTCGACTGAGTCGCGAT
GGTCAGGGGGCGGGAAAGGGGGGCTTCTCTCGGAGAGGACGAGGCCTTACTGACGACAGCCTCAGGTGCTCTGGC
GGAGAGGAACACGTTCCAGGGGGAGCGGTGCATCTACAACGCGCTCAACGACCGGATACGCAACCTGCTGCTGCA
GTACGACTTCTCCAAGACGTCGGACCCCTACGTCTACTGGTCCACGCACATCTCCGGCCTCCTGAGCCGGACTCG
GCCGCCGACGTCGGACATCTCCGTCGTGGCCGGCCCGCGCAGCTTCGACCTGCACAAGTTCCTGCTCGCGTCCCG
GACGCCCTACTTCCGGAGGAAGCTCGAGGCCCAGCCGGAGACGTCGACGTGGACGCTGCCGCCGTCGGTCGCGCC
CGAGGCCCTCCAGATCGCCCTGCGCTACGTCTACCTGGGCGAGCTGCCCCGGGACCTGGTCCCGCCGGGCAGCTC
GGCCTCGGAGGAGGACGTGGCCCGGGGCCTGGACCGGATCAGCAAGCAGCTCGGCCTCGACCGGCTCTGGGAGGC
CATGGTGGCCGGCGGCGACGACCGCCGGCTGGCCCGGCAGCGGTACCAGGACGAGGAGGCGCGCGCGCTCGGCCA
GGTGCGCGACTTCTTCCGCGCCAACGTCCTCGGCCGCAAGGTGGTGGTGGACAGGGCGCGCGTGGCCGACGTCCG
CTACGGCCACGACAACCCGGCCTTCGCCGACGTCGTGCTCCGGGCCGACGAGCCCGACGACGGCCCGCCCCCGCC
GCCCGCCGCCCTCAACGGCCAGGGCATCCCGACCGGCTTCGCGGCGGAAGGGCGGACGTCGGTCCTGTACCCGGC
GCACAAGGCGATGCTCATCCGCAGCGACTACTTCGCCCGCATGTTCTCGGGCGACTTCGTCGAGGCCCAGCCGTC
GGCGCACCTGCGCGTCGTCACCGTCGACTGCGCGCCCGCCGTGCTCGAGCTCGTCCTCGCCTTCCTCTACGCCGA
CGAGGCCGGCTGCCCGCTCGAGCACGCCCTCGACCTGCTCTACGCCGCCGACATGCTCTTCCTCGACGGCCTCAA
GAACAAGGCGGCCGTGGCGATCAGCACGCTCGGCAGCGGCGCCGGCGGCACCCTCGTCGACCGCTCCCGCCGCCC
CCGCCACGACGGCCGGCCCGAGCCCGAGCTCGAGCCCATCAACATCTACGACGTCATCCACGCCGCCTGGGACCT
GCGCGTCCGCCGCCTCGAGGAGTTCGCCGCCCGCTACCTCGCCGCCCGCCTCGAGGACTACGTCGACGACGCCGA
CTTCCACGACCTGATCCGCGAGAGCGCCGCCCGCCTGCGCCGCCGCGAGGAGACGGACACCATCGAGCTGCTCGA
CGACGTCCGCTACTACCTGTCGGAGCGCTTCCGCCTGCGCTTCGAGGACGCCGGCCTCGACGACGTCATGGCCGA
TCCCGCCGCCGCCGACCCCGCCGCCGATCCCGCCGCCCTCGACCCCGCCGCCGCCGCCGCCGCCGACGACGACTT
CGCCTCCGACGCCGTCAACTACCACCTCCTGCTCGGCAAGATCGACGCCATGCTCGACCGCCTCAAGCTCGACGC
CTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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