© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|4843 |
| Gene name | |
| Location | Contig_244:2858..4887 |
| Strand | + |
| Gene length (bp) | 2029 |
| Transcript length (bp) | 1785 |
| Coding sequence length (bp) | 1785 |
| Protein length (aa) | 595 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00651 | BTB | BTB/POZ domain | 4.5E-08 | 146 | 241 |
| PF00651 | BTB | BTB/POZ domain | 4.4E-10 | 342 | 425 |
| PF13637 | Ank_4 | Ankyrin repeats (many copies) | 2.1E-08 | 41 | 88 |
| PF12796 | Ank_2 | Ankyrin repeats (3 copies) | 1.4E-06 | 41 | 92 |
| PF00023 | Ank | Ankyrin repeat | 1.3E-02 | 69 | 93 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q10225|BTB3_SCHPO | BTB/POZ domain-containing protein 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=btb3 PE=1 SV=1 | 2 | 542 | 2.0E-77 |
| sp|P40560|YIA1_YEAST | Ankyrin repeat-containing protein YIL001W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL001W PE=1 SV=1 | 36 | 538 | 7.0E-63 |
| sp|Q99LJ2|ABTB1_MOUSE | Ankyrin repeat and BTB/POZ domain-containing protein 1 OS=Mus musculus GN=Abtb1 PE=2 SV=1 | 38 | 526 | 1.0E-37 |
| sp|Q5XIU1|ABTB1_RAT | Ankyrin repeat and BTB/POZ domain-containing protein 1 OS=Rattus norvegicus GN=Abtb1 PE=2 SV=1 | 38 | 526 | 3.0E-37 |
| sp|Q969K4|ABTB1_HUMAN | Ankyrin repeat and BTB/POZ domain-containing protein 1 OS=Homo sapiens GN=ABTB1 PE=1 SV=1 | 38 | 526 | 4.0E-35 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q10225|BTB3_SCHPO | BTB/POZ domain-containing protein 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=btb3 PE=1 SV=1 | 2 | 542 | 2.0E-77 |
| sp|P40560|YIA1_YEAST | Ankyrin repeat-containing protein YIL001W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL001W PE=1 SV=1 | 36 | 538 | 7.0E-63 |
| sp|Q99LJ2|ABTB1_MOUSE | Ankyrin repeat and BTB/POZ domain-containing protein 1 OS=Mus musculus GN=Abtb1 PE=2 SV=1 | 38 | 526 | 1.0E-37 |
| sp|Q5XIU1|ABTB1_RAT | Ankyrin repeat and BTB/POZ domain-containing protein 1 OS=Rattus norvegicus GN=Abtb1 PE=2 SV=1 | 38 | 526 | 3.0E-37 |
| sp|Q969K4|ABTB1_HUMAN | Ankyrin repeat and BTB/POZ domain-containing protein 1 OS=Homo sapiens GN=ABTB1 PE=1 SV=1 | 38 | 526 | 4.0E-35 |
| sp|Q9SJ85|Y2474_ARATH | BTB/POZ domain-containing protein At2g04740 OS=Arabidopsis thaliana GN=At2g04740 PE=2 SV=2 | 29 | 311 | 2.0E-16 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005515 | protein binding | Yes |
| GO:0003674 | molecular_function | No |
| GO:0005488 | binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 41 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|4843 MVLRKHELEGKLGEEQQMIKSGVLRDENPLDQSPEFDEFLVACRHGDLRKCQELINLGVNINAKDKFDYTPLIIA SLCGHYELVQLLLESGALAERNTFQGERCIYNALNDRIRNLLLQYDFSKTSDPYVYWSTHISGLLSRTRPPTSDI SVVAGPRSFDLHKFLLASRTPYFRRKLEAQPETSTWTLPPSVAPEALQIALRYVYLGELPRDLVPPGSSASEEDV ARGLDRISKQLGLDRLWEAMVAGGDDRRLARQRYQDEEARALGQVRDFFRANVLGRKVVVDRARVADVRYGHDNP AFADVVLRADEPDDGPPPPPAALNGQGIPTGFAAEGRTSVLYPAHKAMLIRSDYFARMFSGDFVEAQPSAHLRVV TVDCAPAVLELVLAFLYADEAGCPLEHALDLLYAADMLFLDGLKNKAAVAISTLGSGAGGTLVDRSRRPRHDGRP EPELEPINIYDVIHAAWDLRVRRLEEFAARYLAARLEDYVDDADFHDLIRESAARLRRREETDTIELLDDVRYYL SERFRLRFEDAGLDDVMADPAAADPAADPAALDPAAAAAADDDFASDAVNYHLLLGKIDAMLDRLKLDA* |
| Coding | >Hirsu2|4843 ATGGTTCTGCGCAAGCATGAACTCGAGGGTAAGCTGGGTGAGGAGCAGCAAATGATCAAAAGCGGCGTGCTTCGG GACGAAAATCCTCTCGATCAGAGCCCCGAATTCGACGAGTTCCTCGTTGCCTGTCGTCACGGAGACCTGCGCAAG TGCCAGGAGCTGATCAACCTGGGCGTCAACATCAACGCCAAGGACAAGTTCGACTACACGCCACTCATCATCGCC AGTCTCTGTGGGCATTATGAGCTTGTGCAGCTGCTACTGGAATCGGGTGCTCTGGCGGAGAGGAACACGTTCCAG GGGGAGCGGTGCATCTACAACGCGCTCAACGACCGGATACGCAACCTGCTGCTGCAGTACGACTTCTCCAAGACG TCGGACCCCTACGTCTACTGGTCCACGCACATCTCCGGCCTCCTGAGCCGGACTCGGCCGCCGACGTCGGACATC TCCGTCGTGGCCGGCCCGCGCAGCTTCGACCTGCACAAGTTCCTGCTCGCGTCCCGGACGCCCTACTTCCGGAGG AAGCTCGAGGCCCAGCCGGAGACGTCGACGTGGACGCTGCCGCCGTCGGTCGCGCCCGAGGCCCTCCAGATCGCC CTGCGCTACGTCTACCTGGGCGAGCTGCCCCGGGACCTGGTCCCGCCGGGCAGCTCGGCCTCGGAGGAGGACGTG GCCCGGGGCCTGGACCGGATCAGCAAGCAGCTCGGCCTCGACCGGCTCTGGGAGGCCATGGTGGCCGGCGGCGAC GACCGCCGGCTGGCCCGGCAGCGGTACCAGGACGAGGAGGCGCGCGCGCTCGGCCAGGTGCGCGACTTCTTCCGC GCCAACGTCCTCGGCCGCAAGGTGGTGGTGGACAGGGCGCGCGTGGCCGACGTCCGCTACGGCCACGACAACCCG GCCTTCGCCGACGTCGTGCTCCGGGCCGACGAGCCCGACGACGGCCCGCCCCCGCCGCCCGCCGCCCTCAACGGC CAGGGCATCCCGACCGGCTTCGCGGCGGAAGGGCGGACGTCGGTCCTGTACCCGGCGCACAAGGCGATGCTCATC CGCAGCGACTACTTCGCCCGCATGTTCTCGGGCGACTTCGTCGAGGCCCAGCCGTCGGCGCACCTGCGCGTCGTC ACCGTCGACTGCGCGCCCGCCGTGCTCGAGCTCGTCCTCGCCTTCCTCTACGCCGACGAGGCCGGCTGCCCGCTC GAGCACGCCCTCGACCTGCTCTACGCCGCCGACATGCTCTTCCTCGACGGCCTCAAGAACAAGGCGGCCGTGGCG ATCAGCACGCTCGGCAGCGGCGCCGGCGGCACCCTCGTCGACCGCTCCCGCCGCCCCCGCCACGACGGCCGGCCC GAGCCCGAGCTCGAGCCCATCAACATCTACGACGTCATCCACGCCGCCTGGGACCTGCGCGTCCGCCGCCTCGAG GAGTTCGCCGCCCGCTACCTCGCCGCCCGCCTCGAGGACTACGTCGACGACGCCGACTTCCACGACCTGATCCGC GAGAGCGCCGCCCGCCTGCGCCGCCGCGAGGAGACGGACACCATCGAGCTGCTCGACGACGTCCGCTACTACCTG TCGGAGCGCTTCCGCCTGCGCTTCGAGGACGCCGGCCTCGACGACGTCATGGCCGATCCCGCCGCCGCCGACCCC GCCGCCGATCCCGCCGCCCTCGACCCCGCCGCCGCCGCCGCCGCCGACGACGACTTCGCCTCCGACGCCGTCAAC TACCACCTCCTGCTCGGCAAGATCGACGCCATGCTCGACCGCCTCAAGCTCGACGCCTGA |
| Transcript | >Hirsu2|4843 ATGGTTCTGCGCAAGCATGAACTCGAGGGTAAGCTGGGTGAGGAGCAGCAAATGATCAAAAGCGGCGTGCTTCGG GACGAAAATCCTCTCGATCAGAGCCCCGAATTCGACGAGTTCCTCGTTGCCTGTCGTCACGGAGACCTGCGCAAG TGCCAGGAGCTGATCAACCTGGGCGTCAACATCAACGCCAAGGACAAGTTCGACTACACGCCACTCATCATCGCC AGTCTCTGTGGGCATTATGAGCTTGTGCAGCTGCTACTGGAATCGGGTGCTCTGGCGGAGAGGAACACGTTCCAG GGGGAGCGGTGCATCTACAACGCGCTCAACGACCGGATACGCAACCTGCTGCTGCAGTACGACTTCTCCAAGACG TCGGACCCCTACGTCTACTGGTCCACGCACATCTCCGGCCTCCTGAGCCGGACTCGGCCGCCGACGTCGGACATC TCCGTCGTGGCCGGCCCGCGCAGCTTCGACCTGCACAAGTTCCTGCTCGCGTCCCGGACGCCCTACTTCCGGAGG AAGCTCGAGGCCCAGCCGGAGACGTCGACGTGGACGCTGCCGCCGTCGGTCGCGCCCGAGGCCCTCCAGATCGCC CTGCGCTACGTCTACCTGGGCGAGCTGCCCCGGGACCTGGTCCCGCCGGGCAGCTCGGCCTCGGAGGAGGACGTG GCCCGGGGCCTGGACCGGATCAGCAAGCAGCTCGGCCTCGACCGGCTCTGGGAGGCCATGGTGGCCGGCGGCGAC GACCGCCGGCTGGCCCGGCAGCGGTACCAGGACGAGGAGGCGCGCGCGCTCGGCCAGGTGCGCGACTTCTTCCGC GCCAACGTCCTCGGCCGCAAGGTGGTGGTGGACAGGGCGCGCGTGGCCGACGTCCGCTACGGCCACGACAACCCG GCCTTCGCCGACGTCGTGCTCCGGGCCGACGAGCCCGACGACGGCCCGCCCCCGCCGCCCGCCGCCCTCAACGGC CAGGGCATCCCGACCGGCTTCGCGGCGGAAGGGCGGACGTCGGTCCTGTACCCGGCGCACAAGGCGATGCTCATC CGCAGCGACTACTTCGCCCGCATGTTCTCGGGCGACTTCGTCGAGGCCCAGCCGTCGGCGCACCTGCGCGTCGTC ACCGTCGACTGCGCGCCCGCCGTGCTCGAGCTCGTCCTCGCCTTCCTCTACGCCGACGAGGCCGGCTGCCCGCTC GAGCACGCCCTCGACCTGCTCTACGCCGCCGACATGCTCTTCCTCGACGGCCTCAAGAACAAGGCGGCCGTGGCG ATCAGCACGCTCGGCAGCGGCGCCGGCGGCACCCTCGTCGACCGCTCCCGCCGCCCCCGCCACGACGGCCGGCCC GAGCCCGAGCTCGAGCCCATCAACATCTACGACGTCATCCACGCCGCCTGGGACCTGCGCGTCCGCCGCCTCGAG GAGTTCGCCGCCCGCTACCTCGCCGCCCGCCTCGAGGACTACGTCGACGACGCCGACTTCCACGACCTGATCCGC GAGAGCGCCGCCCGCCTGCGCCGCCGCGAGGAGACGGACACCATCGAGCTGCTCGACGACGTCCGCTACTACCTG TCGGAGCGCTTCCGCCTGCGCTTCGAGGACGCCGGCCTCGACGACGTCATGGCCGATCCCGCCGCCGCCGACCCC GCCGCCGATCCCGCCGCCCTCGACCCCGCCGCCGCCGCCGCCGCCGACGACGACTTCGCCTCCGACGCCGTCAAC TACCACCTCCTGCTCGGCAAGATCGACGCCATGCTCGACCGCCTCAAGCTCGACGCCTGA |
| Gene | >Hirsu2|4843 ATGGTTCTGCGCAAGCATGAACTCGAGGGTAAGCTGGGTGAGGAGCAGCAAATGATCAAAAGCGGCGTGCTTCGG GACGAAAATCCTCTCGATCAGAGCCCCGAATTCGACGAGTTCCTCGTTGCCTGTCGTCACGGAGACCTGCGCAAG TGCCAGGAGCTGATCAACCTGGGCGTCAACATCAACGCCAAGGACAAGTTCGACTACACGCCACTCATCATCGTA AGCCGCCTGCCGTCGGATATCTCGCCACAGCACCGCCCAGCGGAGCTGACCAGTCGCGGAGCAGGCCAGTCTCTG TGGGCATTATGAGCTTGTGCAGCTGCTACTGGAATCGGGTATGGCTTTGCTCAACCCCCCCCCCCCCCCTTCTTG TCCCCAATCCTTGCCAGCAGAAGCGACGGCACACTACTCAACCGCGGCCATCGCGACGTTCGACTGAGTCGCGAT GGTCAGGGGGCGGGAAAGGGGGGCTTCTCTCGGAGAGGACGAGGCCTTACTGACGACAGCCTCAGGTGCTCTGGC GGAGAGGAACACGTTCCAGGGGGAGCGGTGCATCTACAACGCGCTCAACGACCGGATACGCAACCTGCTGCTGCA GTACGACTTCTCCAAGACGTCGGACCCCTACGTCTACTGGTCCACGCACATCTCCGGCCTCCTGAGCCGGACTCG GCCGCCGACGTCGGACATCTCCGTCGTGGCCGGCCCGCGCAGCTTCGACCTGCACAAGTTCCTGCTCGCGTCCCG GACGCCCTACTTCCGGAGGAAGCTCGAGGCCCAGCCGGAGACGTCGACGTGGACGCTGCCGCCGTCGGTCGCGCC CGAGGCCCTCCAGATCGCCCTGCGCTACGTCTACCTGGGCGAGCTGCCCCGGGACCTGGTCCCGCCGGGCAGCTC GGCCTCGGAGGAGGACGTGGCCCGGGGCCTGGACCGGATCAGCAAGCAGCTCGGCCTCGACCGGCTCTGGGAGGC CATGGTGGCCGGCGGCGACGACCGCCGGCTGGCCCGGCAGCGGTACCAGGACGAGGAGGCGCGCGCGCTCGGCCA GGTGCGCGACTTCTTCCGCGCCAACGTCCTCGGCCGCAAGGTGGTGGTGGACAGGGCGCGCGTGGCCGACGTCCG CTACGGCCACGACAACCCGGCCTTCGCCGACGTCGTGCTCCGGGCCGACGAGCCCGACGACGGCCCGCCCCCGCC GCCCGCCGCCCTCAACGGCCAGGGCATCCCGACCGGCTTCGCGGCGGAAGGGCGGACGTCGGTCCTGTACCCGGC GCACAAGGCGATGCTCATCCGCAGCGACTACTTCGCCCGCATGTTCTCGGGCGACTTCGTCGAGGCCCAGCCGTC GGCGCACCTGCGCGTCGTCACCGTCGACTGCGCGCCCGCCGTGCTCGAGCTCGTCCTCGCCTTCCTCTACGCCGA CGAGGCCGGCTGCCCGCTCGAGCACGCCCTCGACCTGCTCTACGCCGCCGACATGCTCTTCCTCGACGGCCTCAA GAACAAGGCGGCCGTGGCGATCAGCACGCTCGGCAGCGGCGCCGGCGGCACCCTCGTCGACCGCTCCCGCCGCCC CCGCCACGACGGCCGGCCCGAGCCCGAGCTCGAGCCCATCAACATCTACGACGTCATCCACGCCGCCTGGGACCT GCGCGTCCGCCGCCTCGAGGAGTTCGCCGCCCGCTACCTCGCCGCCCGCCTCGAGGACTACGTCGACGACGCCGA CTTCCACGACCTGATCCGCGAGAGCGCCGCCCGCCTGCGCCGCCGCGAGGAGACGGACACCATCGAGCTGCTCGA CGACGTCCGCTACTACCTGTCGGAGCGCTTCCGCCTGCGCTTCGAGGACGCCGGCCTCGACGACGTCATGGCCGA TCCCGCCGCCGCCGACCCCGCCGCCGATCCCGCCGCCCTCGACCCCGCCGCCGCCGCCGCCGCCGACGACGACTT CGCCTCCGACGCCGTCAACTACCACCTCCTGCTCGGCAAGATCGACGCCATGCTCGACCGCCTCAAGCTCGACGC CTGA |