© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|4841 |
| Gene name | |
| Location | Contig_2439:2082..2601 |
| Strand | - |
| Gene length (bp) | 519 |
| Transcript length (bp) | 420 |
| Coding sequence length (bp) | 420 |
| Protein length (aa) | 140 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05241 | EBP | EXPERA (EXPanded EBP superfamily) | 7.6E-16 | 1 | 111 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 44 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 56 | 78 | 22 |
| 2 | 93 | 115 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|4841 LRRRYAALTGDPYFAAGGGAEPWFRFLLGLELVVQLPLAVSLARRLRRPASGSTELAGLAFGCVTAVAASACCYD LWCMPPARLSPARKPFLLGAVYLPFALVSIVMAVDMYWRLLRRVRASDAAVSEGENKKKKNKVW* |
| Coding | >Hirsu2|4841 CTGCGCCGGCGGTACGCCGCGCTGACGGGCGATCCGTACTTCGCGGCCGGCGGCGGCGCCGAGCCGTGGTTCCGC TTCCTGCTCGGCCTCGAGCTCGTCGTCCAGCTGCCGCTGGCCGTGAGCCTGGCGCGCCGGCTGCGACGGCCGGCT TCGGGATCGACGGAGCTGGCCGGCCTGGCCTTCGGCTGCGTCACGGCCGTGGCCGCGTCGGCCTGCTGCTATGAC CTGTGGTGCATGCCGCCCGCGCGCCTGAGCCCGGCCCGCAAGCCGTTCCTGCTCGGCGCCGTCTACCTGCCCTTT GCCCTCGTCTCCATCGTCATGGCCGTCGACATGTACTGGCGGCTTTTGCGCCGTGTGCGCGCCTCGGACGCTGCG GTATCGGAGGGGGAGAACAAGAAGAAGAAGAACAAGGTGTGGTGA |
| Transcript | >Hirsu2|4841 CTGCGCCGGCGGTACGCCGCGCTGACGGGCGATCCGTACTTCGCGGCCGGCGGCGGCGCCGAGCCGTGGTTCCGC TTCCTGCTCGGCCTCGAGCTCGTCGTCCAGCTGCCGCTGGCCGTGAGCCTGGCGCGCCGGCTGCGACGGCCGGCT TCGGGATCGACGGAGCTGGCCGGCCTGGCCTTCGGCTGCGTCACGGCCGTGGCCGCGTCGGCCTGCTGCTATGAC CTGTGGTGCATGCCGCCCGCGCGCCTGAGCCCGGCCCGCAAGCCGTTCCTGCTCGGCGCCGTCTACCTGCCCTTT GCCCTCGTCTCCATCGTCATGGCCGTCGACATGTACTGGCGGCTTTTGCGCCGTGTGCGCGCCTCGGACGCTGCG GTATCGGAGGGGGAGAACAAGAAGAAGAAGAACAAGGTGTGGTGA |
| Gene | >Hirsu2|4841 CTGCGCCGGCGGTACGCCGCGCTGACGGGCGATCCGTACTTCGCGGCCGGCGGCGGCGCCGAGCCGTGGTTCCGC TTCCTGCTCGGCCTCGAGCTCGTCGTCCAGCTGCCGCTGGCCGTGAGCCTGGCGCGCCGGCTGCGACGGCCGGCT TCGGGATCGACGGAGCTGGCCGGCCTGGCCTTCGGCTGCGTCACGGCCGTGGCCGCGTCGGCCTGCTGCTATGAC CTGTGGTGCATGCCGCCCGCGCGCCTGAGCCCGGCCCGCAAGCCGTTCCTGCTCGGCGCCGTCTACCTGCCCTTT GCCCTCGTCTGTGAGTCTCTCTCTCTCTGTGTGTGTGTGTCTTCGAGGCTGCTGTCCCTTTCCTACGCATTGGCT GTCCAAGGGGCTGACGACGGAAGGGGGGACTTAGCCATCGTCATGGCCGTCGACATGTACTGGCGGCTTTTGCGC CGTGTGCGCGCCTCGGACGCTGCGGTATCGGAGGGGGAGAACAAGAAGAAGAAGAACAAGGTGTGGTGA |