Protein ID | Hirsu2|4841 |
Gene name | |
Location | Contig_2439:2082..2601 |
Strand | - |
Gene length (bp) | 519 |
Transcript length (bp) | 420 |
Coding sequence length (bp) | 420 |
Protein length (aa) | 140 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF05241 | EBP | EXPERA (EXPanded EBP superfamily) | 7.6E-16 | 1 | 111 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 44 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 56 | 78 | 22 |
2 | 93 | 115 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|4841 LRRRYAALTGDPYFAAGGGAEPWFRFLLGLELVVQLPLAVSLARRLRRPASGSTELAGLAFGCVTAVAASACCYD LWCMPPARLSPARKPFLLGAVYLPFALVSIVMAVDMYWRLLRRVRASDAAVSEGENKKKKNKVW* |
Coding | >Hirsu2|4841 CTGCGCCGGCGGTACGCCGCGCTGACGGGCGATCCGTACTTCGCGGCCGGCGGCGGCGCCGAGCCGTGGTTCCGC TTCCTGCTCGGCCTCGAGCTCGTCGTCCAGCTGCCGCTGGCCGTGAGCCTGGCGCGCCGGCTGCGACGGCCGGCT TCGGGATCGACGGAGCTGGCCGGCCTGGCCTTCGGCTGCGTCACGGCCGTGGCCGCGTCGGCCTGCTGCTATGAC CTGTGGTGCATGCCGCCCGCGCGCCTGAGCCCGGCCCGCAAGCCGTTCCTGCTCGGCGCCGTCTACCTGCCCTTT GCCCTCGTCTCCATCGTCATGGCCGTCGACATGTACTGGCGGCTTTTGCGCCGTGTGCGCGCCTCGGACGCTGCG GTATCGGAGGGGGAGAACAAGAAGAAGAAGAACAAGGTGTGGTGA |
Transcript | >Hirsu2|4841 CTGCGCCGGCGGTACGCCGCGCTGACGGGCGATCCGTACTTCGCGGCCGGCGGCGGCGCCGAGCCGTGGTTCCGC TTCCTGCTCGGCCTCGAGCTCGTCGTCCAGCTGCCGCTGGCCGTGAGCCTGGCGCGCCGGCTGCGACGGCCGGCT TCGGGATCGACGGAGCTGGCCGGCCTGGCCTTCGGCTGCGTCACGGCCGTGGCCGCGTCGGCCTGCTGCTATGAC CTGTGGTGCATGCCGCCCGCGCGCCTGAGCCCGGCCCGCAAGCCGTTCCTGCTCGGCGCCGTCTACCTGCCCTTT GCCCTCGTCTCCATCGTCATGGCCGTCGACATGTACTGGCGGCTTTTGCGCCGTGTGCGCGCCTCGGACGCTGCG GTATCGGAGGGGGAGAACAAGAAGAAGAAGAACAAGGTGTGGTGA |
Gene | >Hirsu2|4841 CTGCGCCGGCGGTACGCCGCGCTGACGGGCGATCCGTACTTCGCGGCCGGCGGCGGCGCCGAGCCGTGGTTCCGC TTCCTGCTCGGCCTCGAGCTCGTCGTCCAGCTGCCGCTGGCCGTGAGCCTGGCGCGCCGGCTGCGACGGCCGGCT TCGGGATCGACGGAGCTGGCCGGCCTGGCCTTCGGCTGCGTCACGGCCGTGGCCGCGTCGGCCTGCTGCTATGAC CTGTGGTGCATGCCGCCCGCGCGCCTGAGCCCGGCCCGCAAGCCGTTCCTGCTCGGCGCCGTCTACCTGCCCTTT GCCCTCGTCTGTGAGTCTCTCTCTCTCTGTGTGTGTGTGTCTTCGAGGCTGCTGTCCCTTTCCTACGCATTGGCT GTCCAAGGGGCTGACGACGGAAGGGGGGACTTAGCCATCGTCATGGCCGTCGACATGTACTGGCGGCTTTTGCGC CGTGTGCGCGCCTCGGACGCTGCGGTATCGGAGGGGGAGAACAAGAAGAAGAAGAACAAGGTGTGGTGA |