Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4841
Gene name
LocationContig_2439:2082..2601
Strand-
Gene length (bp)519
Transcript length (bp)420
Coding sequence length (bp)420
Protein length (aa) 140

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10914 DUF2781 Protein of unknown function (DUF2781) 8.1E-19 1 114

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 44 0.5

Transmembrane Domains

Domain # Start End Length
1 56 78 22
2 93 115 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4841
LRRRYAALTGDPYFAAGGGAEPWFRFLLGLELVVQLPLAVSLARRLRRPASGSTELAGLAFGCVTAVAASACCYD
LWCMPPARLSPARKPFLLGAVYLPFALVSIVMAVDMYWRLLRRVRASDAAVSEGENKKKKNKVW*
Coding >Hirsu2|4841
CTGCGCCGGCGGTACGCCGCGCTGACGGGCGATCCGTACTTCGCGGCCGGCGGCGGCGCCGAGCCGTGGTTCCGC
TTCCTGCTCGGCCTCGAGCTCGTCGTCCAGCTGCCGCTGGCCGTGAGCCTGGCGCGCCGGCTGCGACGGCCGGCT
TCGGGATCGACGGAGCTGGCCGGCCTGGCCTTCGGCTGCGTCACGGCCGTGGCCGCGTCGGCCTGCTGCTATGAC
CTGTGGTGCATGCCGCCCGCGCGCCTGAGCCCGGCCCGCAAGCCGTTCCTGCTCGGCGCCGTCTACCTGCCCTTT
GCCCTCGTCTCCATCGTCATGGCCGTCGACATGTACTGGCGGCTTTTGCGCCGTGTGCGCGCCTCGGACGCTGCG
GTATCGGAGGGGGAGAACAAGAAGAAGAAGAACAAGGTGTGGTGA
Transcript >Hirsu2|4841
CTGCGCCGGCGGTACGCCGCGCTGACGGGCGATCCGTACTTCGCGGCCGGCGGCGGCGCCGAGCCGTGGTTCCGC
TTCCTGCTCGGCCTCGAGCTCGTCGTCCAGCTGCCGCTGGCCGTGAGCCTGGCGCGCCGGCTGCGACGGCCGGCT
TCGGGATCGACGGAGCTGGCCGGCCTGGCCTTCGGCTGCGTCACGGCCGTGGCCGCGTCGGCCTGCTGCTATGAC
CTGTGGTGCATGCCGCCCGCGCGCCTGAGCCCGGCCCGCAAGCCGTTCCTGCTCGGCGCCGTCTACCTGCCCTTT
GCCCTCGTCTCCATCGTCATGGCCGTCGACATGTACTGGCGGCTTTTGCGCCGTGTGCGCGCCTCGGACGCTGCG
GTATCGGAGGGGGAGAACAAGAAGAAGAAGAACAAGGTGTGGTGA
Gene >Hirsu2|4841
CTGCGCCGGCGGTACGCCGCGCTGACGGGCGATCCGTACTTCGCGGCCGGCGGCGGCGCCGAGCCGTGGTTCCGC
TTCCTGCTCGGCCTCGAGCTCGTCGTCCAGCTGCCGCTGGCCGTGAGCCTGGCGCGCCGGCTGCGACGGCCGGCT
TCGGGATCGACGGAGCTGGCCGGCCTGGCCTTCGGCTGCGTCACGGCCGTGGCCGCGTCGGCCTGCTGCTATGAC
CTGTGGTGCATGCCGCCCGCGCGCCTGAGCCCGGCCCGCAAGCCGTTCCTGCTCGGCGCCGTCTACCTGCCCTTT
GCCCTCGTCTGTGAGTCTCTCTCTCTCTGTGTGTGTGTGTCTTCGAGGCTGCTGTCCCTTTCCTACGCATTGGCT
GTCCAAGGGGCTGACGACGGAAGGGGGGACTTAGCCATCGTCATGGCCGTCGACATGTACTGGCGGCTTTTGCGC
CGTGTGCGCGCCTCGGACGCTGCGGTATCGGAGGGGGAGAACAAGAAGAAGAAGAACAAGGTGTGGTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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