Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4840
Gene name
LocationContig_2439:809..1798
Strand+
Gene length (bp)989
Transcript length (bp)882
Coding sequence length (bp)882
Protein length (aa) 294

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Endoplasmic reticulum Signal peptide 0.1303 0.1607 0.2542 0.1043 0.127 0.0162 0.8402 0.4998 0.3251 0.0246

SignalP

SignalP signal predicted Location Score
Yes 1 - 22 0.828886

Transmembrane Domains

Domain # Start End Length
1 240 262 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5306
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|7462
Ophiocordyceps australis map64 (Brazil) OphauB2|5649
Ophiocordyceps camponoti-floridani Ophcf2|06330
Ophiocordyceps kimflemingae Ophio5|6529
Ophiocordyceps subramaniannii Hirsu2|4840 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4840
MMLAPPLLLGAAPLLLRAAAAAAQQQQLLHADGLPSYHYGAPIHVECMNRSSETGEHLETAEHELQWIPFPACAE
TGKPLEFEYGVEGEVNCTIAAVSDPLFHLLEFYVHSDAPLSCRLPARPPAQVEVVGERPPAPGFVPLVFALAGTL
QLSHLHVSAHLNVLLHSTPKHHARPHDSGVLDSAIAYSTSPLGAGAHRLIVGAPLPLALSVRWFPTPALPKTEGH
VEWQGLGGHVYASTVFYSLASFVAGLLLAAMYLLGVVLPRRLRGRSMGGATPLGHGLGNGWGYAKRKD*
Coding >Hirsu2|4840
ATGATGTTGGCGCCCCCGCTGCTGCTGGGCGCGGCGCCGCTGCTGCTCCGGGCGGCGGCGGCGGCGGCGCAGCAG
CAGCAGCTGTTGCACGCGGACGGCCTGCCGTCGTATCACTACGGGGCGCCGATCCACGTCGAGTGCATGAACCGC
AGCTCGGAGACGGGCGAGCATCTCGAGACGGCGGAGCACGAGCTGCAGTGGATCCCGTTCCCGGCGTGCGCCGAG
ACGGGCAAGCCGCTCGAGTTCGAATACGGGGTGGAGGGCGAGGTCAACTGCACGATCGCGGCCGTGTCGGACCCG
CTCTTCCACCTGCTCGAGTTCTACGTGCACAGCGACGCGCCGCTGTCGTGCCGGCTGCCGGCGCGGCCGCCGGCG
CAGGTCGAGGTGGTGGGCGAGCGGCCGCCGGCGCCGGGCTTCGTCCCGCTCGTCTTCGCCCTGGCCGGCACGCTG
CAGCTGAGCCACCTGCACGTCAGCGCCCACCTCAACGTGCTGCTGCACAGCACGCCCAAGCACCACGCGCGCCCG
CACGACAGCGGCGTGCTCGACTCGGCCATCGCCTACAGCACCAGCCCGCTGGGCGCCGGCGCCCACCGCCTCATC
GTCGGCGCGCCCCTGCCGCTCGCCCTCTCCGTCCGCTGGTTCCCGACCCCGGCCCTGCCCAAGACGGAGGGCCAC
GTCGAGTGGCAGGGCCTCGGCGGCCACGTCTACGCCAGCACCGTCTTCTACAGCCTCGCCTCCTTCGTCGCCGGC
CTGCTGCTGGCCGCCATGTACCTGCTCGGCGTCGTCCTGCCCCGCCGCCTGCGCGGCCGCTCCATGGGCGGCGCC
ACCCCGCTGGGCCACGGCCTCGGCAACGGCTGGGGCTATGCCAAGCGCAAGGATTGA
Transcript >Hirsu2|4840
ATGATGTTGGCGCCCCCGCTGCTGCTGGGCGCGGCGCCGCTGCTGCTCCGGGCGGCGGCGGCGGCGGCGCAGCAG
CAGCAGCTGTTGCACGCGGACGGCCTGCCGTCGTATCACTACGGGGCGCCGATCCACGTCGAGTGCATGAACCGC
AGCTCGGAGACGGGCGAGCATCTCGAGACGGCGGAGCACGAGCTGCAGTGGATCCCGTTCCCGGCGTGCGCCGAG
ACGGGCAAGCCGCTCGAGTTCGAATACGGGGTGGAGGGCGAGGTCAACTGCACGATCGCGGCCGTGTCGGACCCG
CTCTTCCACCTGCTCGAGTTCTACGTGCACAGCGACGCGCCGCTGTCGTGCCGGCTGCCGGCGCGGCCGCCGGCG
CAGGTCGAGGTGGTGGGCGAGCGGCCGCCGGCGCCGGGCTTCGTCCCGCTCGTCTTCGCCCTGGCCGGCACGCTG
CAGCTGAGCCACCTGCACGTCAGCGCCCACCTCAACGTGCTGCTGCACAGCACGCCCAAGCACCACGCGCGCCCG
CACGACAGCGGCGTGCTCGACTCGGCCATCGCCTACAGCACCAGCCCGCTGGGCGCCGGCGCCCACCGCCTCATC
GTCGGCGCGCCCCTGCCGCTCGCCCTCTCCGTCCGCTGGTTCCCGACCCCGGCCCTGCCCAAGACGGAGGGCCAC
GTCGAGTGGCAGGGCCTCGGCGGCCACGTCTACGCCAGCACCGTCTTCTACAGCCTCGCCTCCTTCGTCGCCGGC
CTGCTGCTGGCCGCCATGTACCTGCTCGGCGTCGTCCTGCCCCGCCGCCTGCGCGGCCGCTCCATGGGCGGCGCC
ACCCCGCTGGGCCACGGCCTCGGCAACGGCTGGGGCTATGCCAAGCGCAAGGATTGA
Gene >Hirsu2|4840
ATGATGTTGGCGCCCCCGCTGCTGCTGGGCGCGGCGCCGCTGCTGCTCCGGGCGGCGGCGGCGGCGGCGCAGCAG
CAGCAGCTGTTGCACGCGGACGGCCTGCCGTCGTATCACTACGGGGCGCCGATCCACGTCGAGTGCATGAACCGC
AGCTCGTGAGTTGTCTTTTCTCCCTTCCTTCCCCTTGTCCCTTCTCGTTGTCGCCCCTCCTCTCCTTGTCCCGCG
CGGCGCAGAGGGCACGAGGCTGACGGACGGCGGCCAGGGAGACGGGCGAGCATCTCGAGACGGCGGAGCACGAGC
TGCAGTGGATCCCGTTCCCGGCGTGCGCCGAGACGGGCAAGCCGCTCGAGTTCGAATACGGGGTGGAGGGCGAGG
TCAACTGCACGATCGCGGCCGTGTCGGACCCGCTCTTCCACCTGCTCGAGTTCTACGTGCACAGCGACGCGCCGC
TGTCGTGCCGGCTGCCGGCGCGGCCGCCGGCGCAGGTCGAGGTGGTGGGCGAGCGGCCGCCGGCGCCGGGCTTCG
TCCCGCTCGTCTTCGCCCTGGCCGGCACGCTGCAGCTGAGCCACCTGCACGTCAGCGCCCACCTCAACGTGCTGC
TGCACAGCACGCCCAAGCACCACGCGCGCCCGCACGACAGCGGCGTGCTCGACTCGGCCATCGCCTACAGCACCA
GCCCGCTGGGCGCCGGCGCCCACCGCCTCATCGTCGGCGCGCCCCTGCCGCTCGCCCTCTCCGTCCGCTGGTTCC
CGACCCCGGCCCTGCCCAAGACGGAGGGCCACGTCGAGTGGCAGGGCCTCGGCGGCCACGTCTACGCCAGCACCG
TCTTCTACAGCCTCGCCTCCTTCGTCGCCGGCCTGCTGCTGGCCGCCATGTACCTGCTCGGCGTCGTCCTGCCCC
GCCGCCTGCGCGGCCGCTCCATGGGCGGCGCCACCCCGCTGGGCCACGGCCTCGGCAACGGCTGGGGCTATGCCA
AGCGCAAGGATTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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