Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4840
Gene name
LocationContig_2439:809..1798
Strand+
Gene length (bp)989
Transcript length (bp)882
Coding sequence length (bp)882
Protein length (aa) 294

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 24 0.45

Transmembrane Domains

Domain # Start End Length
1 240 262 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4840
MMLAPPLLLGAAPLLLRAAAAAAQQQQLLHADGLPSYHYGAPIHVECMNRSSETGEHLETAEHELQWIPFPACAE
TGKPLEFEYGVEGEVNCTIAAVSDPLFHLLEFYVHSDAPLSCRLPARPPAQVEVVGERPPAPGFVPLVFALAGTL
QLSHLHVSAHLNVLLHSTPKHHARPHDSGVLDSAIAYSTSPLGAGAHRLIVGAPLPLALSVRWFPTPALPKTEGH
VEWQGLGGHVYASTVFYSLASFVAGLLLAAMYLLGVVLPRRLRGRSMGGATPLGHGLGNGWGYAKRKD*
Coding >Hirsu2|4840
ATGATGTTGGCGCCCCCGCTGCTGCTGGGCGCGGCGCCGCTGCTGCTCCGGGCGGCGGCGGCGGCGGCGCAGCAG
CAGCAGCTGTTGCACGCGGACGGCCTGCCGTCGTATCACTACGGGGCGCCGATCCACGTCGAGTGCATGAACCGC
AGCTCGGAGACGGGCGAGCATCTCGAGACGGCGGAGCACGAGCTGCAGTGGATCCCGTTCCCGGCGTGCGCCGAG
ACGGGCAAGCCGCTCGAGTTCGAATACGGGGTGGAGGGCGAGGTCAACTGCACGATCGCGGCCGTGTCGGACCCG
CTCTTCCACCTGCTCGAGTTCTACGTGCACAGCGACGCGCCGCTGTCGTGCCGGCTGCCGGCGCGGCCGCCGGCG
CAGGTCGAGGTGGTGGGCGAGCGGCCGCCGGCGCCGGGCTTCGTCCCGCTCGTCTTCGCCCTGGCCGGCACGCTG
CAGCTGAGCCACCTGCACGTCAGCGCCCACCTCAACGTGCTGCTGCACAGCACGCCCAAGCACCACGCGCGCCCG
CACGACAGCGGCGTGCTCGACTCGGCCATCGCCTACAGCACCAGCCCGCTGGGCGCCGGCGCCCACCGCCTCATC
GTCGGCGCGCCCCTGCCGCTCGCCCTCTCCGTCCGCTGGTTCCCGACCCCGGCCCTGCCCAAGACGGAGGGCCAC
GTCGAGTGGCAGGGCCTCGGCGGCCACGTCTACGCCAGCACCGTCTTCTACAGCCTCGCCTCCTTCGTCGCCGGC
CTGCTGCTGGCCGCCATGTACCTGCTCGGCGTCGTCCTGCCCCGCCGCCTGCGCGGCCGCTCCATGGGCGGCGCC
ACCCCGCTGGGCCACGGCCTCGGCAACGGCTGGGGCTATGCCAAGCGCAAGGATTGA
Transcript >Hirsu2|4840
ATGATGTTGGCGCCCCCGCTGCTGCTGGGCGCGGCGCCGCTGCTGCTCCGGGCGGCGGCGGCGGCGGCGCAGCAG
CAGCAGCTGTTGCACGCGGACGGCCTGCCGTCGTATCACTACGGGGCGCCGATCCACGTCGAGTGCATGAACCGC
AGCTCGGAGACGGGCGAGCATCTCGAGACGGCGGAGCACGAGCTGCAGTGGATCCCGTTCCCGGCGTGCGCCGAG
ACGGGCAAGCCGCTCGAGTTCGAATACGGGGTGGAGGGCGAGGTCAACTGCACGATCGCGGCCGTGTCGGACCCG
CTCTTCCACCTGCTCGAGTTCTACGTGCACAGCGACGCGCCGCTGTCGTGCCGGCTGCCGGCGCGGCCGCCGGCG
CAGGTCGAGGTGGTGGGCGAGCGGCCGCCGGCGCCGGGCTTCGTCCCGCTCGTCTTCGCCCTGGCCGGCACGCTG
CAGCTGAGCCACCTGCACGTCAGCGCCCACCTCAACGTGCTGCTGCACAGCACGCCCAAGCACCACGCGCGCCCG
CACGACAGCGGCGTGCTCGACTCGGCCATCGCCTACAGCACCAGCCCGCTGGGCGCCGGCGCCCACCGCCTCATC
GTCGGCGCGCCCCTGCCGCTCGCCCTCTCCGTCCGCTGGTTCCCGACCCCGGCCCTGCCCAAGACGGAGGGCCAC
GTCGAGTGGCAGGGCCTCGGCGGCCACGTCTACGCCAGCACCGTCTTCTACAGCCTCGCCTCCTTCGTCGCCGGC
CTGCTGCTGGCCGCCATGTACCTGCTCGGCGTCGTCCTGCCCCGCCGCCTGCGCGGCCGCTCCATGGGCGGCGCC
ACCCCGCTGGGCCACGGCCTCGGCAACGGCTGGGGCTATGCCAAGCGCAAGGATTGA
Gene >Hirsu2|4840
ATGATGTTGGCGCCCCCGCTGCTGCTGGGCGCGGCGCCGCTGCTGCTCCGGGCGGCGGCGGCGGCGGCGCAGCAG
CAGCAGCTGTTGCACGCGGACGGCCTGCCGTCGTATCACTACGGGGCGCCGATCCACGTCGAGTGCATGAACCGC
AGCTCGTGAGTTGTCTTTTCTCCCTTCCTTCCCCTTGTCCCTTCTCGTTGTCGCCCCTCCTCTCCTTGTCCCGCG
CGGCGCAGAGGGCACGAGGCTGACGGACGGCGGCCAGGGAGACGGGCGAGCATCTCGAGACGGCGGAGCACGAGC
TGCAGTGGATCCCGTTCCCGGCGTGCGCCGAGACGGGCAAGCCGCTCGAGTTCGAATACGGGGTGGAGGGCGAGG
TCAACTGCACGATCGCGGCCGTGTCGGACCCGCTCTTCCACCTGCTCGAGTTCTACGTGCACAGCGACGCGCCGC
TGTCGTGCCGGCTGCCGGCGCGGCCGCCGGCGCAGGTCGAGGTGGTGGGCGAGCGGCCGCCGGCGCCGGGCTTCG
TCCCGCTCGTCTTCGCCCTGGCCGGCACGCTGCAGCTGAGCCACCTGCACGTCAGCGCCCACCTCAACGTGCTGC
TGCACAGCACGCCCAAGCACCACGCGCGCCCGCACGACAGCGGCGTGCTCGACTCGGCCATCGCCTACAGCACCA
GCCCGCTGGGCGCCGGCGCCCACCGCCTCATCGTCGGCGCGCCCCTGCCGCTCGCCCTCTCCGTCCGCTGGTTCC
CGACCCCGGCCCTGCCCAAGACGGAGGGCCACGTCGAGTGGCAGGGCCTCGGCGGCCACGTCTACGCCAGCACCG
TCTTCTACAGCCTCGCCTCCTTCGTCGCCGGCCTGCTGCTGGCCGCCATGTACCTGCTCGGCGTCGTCCTGCCCC
GCCGCCTGCGCGGCCGCTCCATGGGCGGCGCCACCCCGCTGGGCCACGGCCTCGGCAACGGCTGGGGCTATGCCA
AGCGCAAGGATTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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