© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|4818 |
| Gene name | |
| Location | Contig_2429:2119..2527 |
| Strand | - |
| Gene length (bp) | 408 |
| Transcript length (bp) | 408 |
| Coding sequence length (bp) | 408 |
| Protein length (aa) | 136 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07798 | CCDC90-like | Coiled-coil domain-containing protein 90-like | 2.3E-41 | 1 | 134 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P43557|FMP32_YEAST | Protein FMP32, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FMP32 PE=1 SV=1 | 4 | 134 | 3.0E-41 |
| sp|O14042|FMP32_SCHPO | Protein fmp32, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fmp32 PE=3 SV=1 | 2 | 135 | 9.0E-24 |
| sp|Q10073|YAN8_SCHPO | Uncharacterized CCDC90 family protein C3H1.08c, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H1.08c PE=3 SV=1 | 10 | 116 | 2.0E-15 |
| sp|Q0P4J6|MCUR1_XENTR | Mitochondrial calcium uniporter regulator 1 OS=Xenopus tropicalis GN=mcur1 PE=2 SV=1 | 19 | 133 | 2.0E-08 |
| sp|Q9CXD6|MCUR1_MOUSE | Mitochondrial calcium uniporter regulator 1 OS=Mus musculus GN=Mcur1 PE=1 SV=1 | 18 | 133 | 7.0E-08 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P43557|FMP32_YEAST | Protein FMP32, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FMP32 PE=1 SV=1 | 4 | 134 | 3.0E-41 |
| sp|O14042|FMP32_SCHPO | Protein fmp32, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fmp32 PE=3 SV=1 | 2 | 135 | 9.0E-24 |
| sp|Q10073|YAN8_SCHPO | Uncharacterized CCDC90 family protein C3H1.08c, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H1.08c PE=3 SV=1 | 10 | 116 | 2.0E-15 |
| sp|Q0P4J6|MCUR1_XENTR | Mitochondrial calcium uniporter regulator 1 OS=Xenopus tropicalis GN=mcur1 PE=2 SV=1 | 19 | 133 | 2.0E-08 |
| sp|Q9CXD6|MCUR1_MOUSE | Mitochondrial calcium uniporter regulator 1 OS=Mus musculus GN=Mcur1 PE=1 SV=1 | 18 | 133 | 7.0E-08 |
| sp|Q96AQ8|MCUR1_HUMAN | Mitochondrial calcium uniporter regulator 1 OS=Homo sapiens GN=MCUR1 PE=1 SV=1 | 18 | 133 | 1.0E-07 |
| sp|Q4V897|CC90B_RAT | Coiled-coil domain-containing protein 90B, mitochondrial OS=Rattus norvegicus GN=Ccdc90b PE=2 SV=1 | 21 | 133 | 1.0E-07 |
| sp|Q8C3X2|CC90B_MOUSE | Coiled-coil domain-containing protein 90B, mitochondrial OS=Mus musculus GN=Ccdc90b PE=1 SV=1 | 21 | 133 | 3.0E-07 |
| sp|Q9GZT6|CC90B_HUMAN | Coiled-coil domain-containing protein 90B, mitochondrial OS=Homo sapiens GN=CCDC90B PE=1 SV=2 | 21 | 133 | 7.0E-07 |
| sp|Q6DJ87|CC90B_XENTR | Coiled-coil domain-containing protein 90B, mitochondrial OS=Xenopus tropicalis GN=ccdc90b PE=2 SV=2 | 21 | 133 | 3.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 43 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 112 | 134 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|4818 MVLRENAAKATYTQKVDFAKLRSELLSADSSESNTTRSAHERLTNDIAKLSSRLRDEIGRTQASVRLDLNLEKGR IREEAVGQELKIKETETKIEQEVAALREKLEQVKFQTLQWLMGVCTGFAALMLGAWRLLM* |
| Coding | >Hirsu2|4818 ATGGTGCTGCGGGAGAACGCGGCCAAGGCGACGTACACGCAAAAGGTGGACTTCGCCAAGCTGCGGTCGGAGCTG CTGTCGGCGGACAGCTCGGAGTCGAACACGACGCGCAGCGCGCACGAGCGGCTGACCAACGACATCGCCAAGCTG AGCAGCCGGCTGCGGGACGAGATCGGGCGCACGCAGGCCAGCGTCCGGCTCGACCTCAACCTGGAGAAGGGCCGG ATCCGCGAGGAGGCGGTCGGGCAGGAGCTCAAGATCAAGGAGACGGAGACCAAGATCGAGCAGGAGGTGGCGGCG CTGCGGGAGAAGCTGGAGCAGGTCAAGTTCCAGACGCTGCAGTGGCTGATGGGCGTCTGCACCGGCTTCGCCGCC CTGATGCTCGGTGCCTGGCGCCTGCTCATGTGA |
| Transcript | >Hirsu2|4818 ATGGTGCTGCGGGAGAACGCGGCCAAGGCGACGTACACGCAAAAGGTGGACTTCGCCAAGCTGCGGTCGGAGCTG CTGTCGGCGGACAGCTCGGAGTCGAACACGACGCGCAGCGCGCACGAGCGGCTGACCAACGACATCGCCAAGCTG AGCAGCCGGCTGCGGGACGAGATCGGGCGCACGCAGGCCAGCGTCCGGCTCGACCTCAACCTGGAGAAGGGCCGG ATCCGCGAGGAGGCGGTCGGGCAGGAGCTCAAGATCAAGGAGACGGAGACCAAGATCGAGCAGGAGGTGGCGGCG CTGCGGGAGAAGCTGGAGCAGGTCAAGTTCCAGACGCTGCAGTGGCTGATGGGCGTCTGCACCGGCTTCGCCGCC CTGATGCTCGGTGCCTGGCGCCTGCTCATGTGA |
| Gene | >Hirsu2|4818 ATGGTGCTGCGGGAGAACGCGGCCAAGGCGACGTACACGCAAAAGGTGGACTTCGCCAAGCTGCGGTCGGAGCTG CTGTCGGCGGACAGCTCGGAGTCGAACACGACGCGCAGCGCGCACGAGCGGCTGACCAACGACATCGCCAAGCTG AGCAGCCGGCTGCGGGACGAGATCGGGCGCACGCAGGCCAGCGTCCGGCTCGACCTCAACCTGGAGAAGGGCCGG ATCCGCGAGGAGGCGGTCGGGCAGGAGCTCAAGATCAAGGAGACGGAGACCAAGATCGAGCAGGAGGTGGCGGCG CTGCGGGAGAAGCTGGAGCAGGTCAAGTTCCAGACGCTGCAGTGGCTGATGGGCGTCTGCACCGGCTTCGCCGCC CTGATGCTCGGTGCCTGGCGCCTGCTCATGTGA |