Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4818
Gene name
LocationContig_2429:2119..2527
Strand-
Gene length (bp)408
Transcript length (bp)408
Coding sequence length (bp)408
Protein length (aa) 136

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07798 DUF1640 Protein of unknown function (DUF1640) 4.8E-42 1 134

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|P43557|FMP32_YEAST Protein FMP32, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FMP32 PE=1 SV=1 4 134 3.0E-41
sp|O14042|FMP32_SCHPO Protein fmp32, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fmp32 PE=3 SV=1 2 135 9.0E-24
sp|Q10073|YAN8_SCHPO Uncharacterized CCDC90 family protein C3H1.08c, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H1.08c PE=3 SV=1 10 116 2.0E-15
sp|Q0P4J6|MCUR1_XENTR Mitochondrial calcium uniporter regulator 1 OS=Xenopus tropicalis GN=mcur1 PE=2 SV=1 19 133 2.0E-08
sp|Q9CXD6|MCUR1_MOUSE Mitochondrial calcium uniporter regulator 1 OS=Mus musculus GN=Mcur1 PE=1 SV=1 18 133 7.0E-08
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|P43557|FMP32_YEAST Protein FMP32, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FMP32 PE=1 SV=1 4 134 3.0E-41
sp|O14042|FMP32_SCHPO Protein fmp32, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fmp32 PE=3 SV=1 2 135 9.0E-24
sp|Q10073|YAN8_SCHPO Uncharacterized CCDC90 family protein C3H1.08c, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H1.08c PE=3 SV=1 10 116 2.0E-15
sp|Q0P4J6|MCUR1_XENTR Mitochondrial calcium uniporter regulator 1 OS=Xenopus tropicalis GN=mcur1 PE=2 SV=1 19 133 2.0E-08
sp|Q9CXD6|MCUR1_MOUSE Mitochondrial calcium uniporter regulator 1 OS=Mus musculus GN=Mcur1 PE=1 SV=1 18 133 7.0E-08
sp|Q96AQ8|MCUR1_HUMAN Mitochondrial calcium uniporter regulator 1 OS=Homo sapiens GN=MCUR1 PE=1 SV=1 18 133 1.0E-07
sp|Q4V897|CC90B_RAT Coiled-coil domain-containing protein 90B, mitochondrial OS=Rattus norvegicus GN=Ccdc90b PE=2 SV=1 21 133 1.0E-07
sp|Q8C3X2|CC90B_MOUSE Coiled-coil domain-containing protein 90B, mitochondrial OS=Mus musculus GN=Ccdc90b PE=1 SV=1 21 133 3.0E-07
sp|Q9GZT6|CC90B_HUMAN Coiled-coil domain-containing protein 90B, mitochondrial OS=Homo sapiens GN=CCDC90B PE=1 SV=2 21 133 7.0E-07
sp|Q6DJ87|CC90B_XENTR Coiled-coil domain-containing protein 90B, mitochondrial OS=Xenopus tropicalis GN=ccdc90b PE=2 SV=2 21 133 3.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 43 0.45

Transmembrane Domains

Domain # Start End Length
1 112 134 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4818
MVLRENAAKATYTQKVDFAKLRSELLSADSSESNTTRSAHERLTNDIAKLSSRLRDEIGRTQASVRLDLNLEKGR
IREEAVGQELKIKETETKIEQEVAALREKLEQVKFQTLQWLMGVCTGFAALMLGAWRLLM*
Coding >Hirsu2|4818
ATGGTGCTGCGGGAGAACGCGGCCAAGGCGACGTACACGCAAAAGGTGGACTTCGCCAAGCTGCGGTCGGAGCTG
CTGTCGGCGGACAGCTCGGAGTCGAACACGACGCGCAGCGCGCACGAGCGGCTGACCAACGACATCGCCAAGCTG
AGCAGCCGGCTGCGGGACGAGATCGGGCGCACGCAGGCCAGCGTCCGGCTCGACCTCAACCTGGAGAAGGGCCGG
ATCCGCGAGGAGGCGGTCGGGCAGGAGCTCAAGATCAAGGAGACGGAGACCAAGATCGAGCAGGAGGTGGCGGCG
CTGCGGGAGAAGCTGGAGCAGGTCAAGTTCCAGACGCTGCAGTGGCTGATGGGCGTCTGCACCGGCTTCGCCGCC
CTGATGCTCGGTGCCTGGCGCCTGCTCATGTGA
Transcript >Hirsu2|4818
ATGGTGCTGCGGGAGAACGCGGCCAAGGCGACGTACACGCAAAAGGTGGACTTCGCCAAGCTGCGGTCGGAGCTG
CTGTCGGCGGACAGCTCGGAGTCGAACACGACGCGCAGCGCGCACGAGCGGCTGACCAACGACATCGCCAAGCTG
AGCAGCCGGCTGCGGGACGAGATCGGGCGCACGCAGGCCAGCGTCCGGCTCGACCTCAACCTGGAGAAGGGCCGG
ATCCGCGAGGAGGCGGTCGGGCAGGAGCTCAAGATCAAGGAGACGGAGACCAAGATCGAGCAGGAGGTGGCGGCG
CTGCGGGAGAAGCTGGAGCAGGTCAAGTTCCAGACGCTGCAGTGGCTGATGGGCGTCTGCACCGGCTTCGCCGCC
CTGATGCTCGGTGCCTGGCGCCTGCTCATGTGA
Gene >Hirsu2|4818
ATGGTGCTGCGGGAGAACGCGGCCAAGGCGACGTACACGCAAAAGGTGGACTTCGCCAAGCTGCGGTCGGAGCTG
CTGTCGGCGGACAGCTCGGAGTCGAACACGACGCGCAGCGCGCACGAGCGGCTGACCAACGACATCGCCAAGCTG
AGCAGCCGGCTGCGGGACGAGATCGGGCGCACGCAGGCCAGCGTCCGGCTCGACCTCAACCTGGAGAAGGGCCGG
ATCCGCGAGGAGGCGGTCGGGCAGGAGCTCAAGATCAAGGAGACGGAGACCAAGATCGAGCAGGAGGTGGCGGCG
CTGCGGGAGAAGCTGGAGCAGGTCAAGTTCCAGACGCTGCAGTGGCTGATGGGCGTCTGCACCGGCTTCGCCGCC
CTGATGCTCGGTGCCTGGCGCCTGCTCATGTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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