Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4792
Gene name
LocationContig_2416:114..939
Strand+
Gene length (bp)825
Transcript length (bp)825
Coding sequence length (bp)825
Protein length (aa) 275

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O13695|YEN1_SCHPO Uncharacterized serine-rich protein C11G7.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11G7.01 PE=4 SV=1 43 127 8.0E-07

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 23 0.5

Transmembrane Domains

Domain # Start End Length
1 43 65 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4792
LPAGGSTPSSASASASTASSTASPADPPNGGGGSGGLSQPSQVAIGVVVPIVAIAVLAVIGLFWWKKRRARQEAE
EERRKEVEDYSYNPNADPTMPSVGQHSADNSYEMKEDGAMGYRGWGSTAAAGSTGRKPSTTMSGGVAGTYSDATS
PTRVHTSEARSAEPLLDGSSSPEGEILGAMGPSAANNRGGDVRRGPSNASSSYSAAARSENSDGGLYGNGATYYE
QYGQNPYSEQRPQDPASQAVIRDNPARRNTRIENSSHYPQQSAGIAQNF*
Coding >Hirsu2|4792
CTGCCGGCCGGCGGCAGCACGCCGTCGTCGGCGTCGGCGAGCGCGTCGACGGCCTCGTCGACGGCGTCGCCCGCC
GACCCCCCCAACGGCGGCGGCGGGTCGGGCGGCCTGAGCCAGCCGTCCCAGGTGGCCATCGGCGTCGTCGTGCCC
ATCGTCGCCATTGCCGTCCTGGCCGTCATCGGCCTCTTCTGGTGGAAGAAGAGGCGGGCGCGGCAGGAGGCCGAG
GAGGAGCGGCGCAAGGAGGTCGAGGACTACTCGTACAACCCCAACGCCGACCCGACGATGCCCTCGGTCGGACAG
CACTCGGCCGACAACTCGTACGAGATGAAGGAGGACGGCGCCATGGGCTACCGCGGCTGGGGCTCGACGGCGGCG
GCCGGCTCGACGGGCCGCAAGCCGTCGACGACCATGTCGGGCGGCGTGGCGGGCACCTACTCGGACGCGACGTCG
CCGACGCGCGTGCACACGTCCGAGGCCCGGTCGGCCGAGCCGCTGCTGGACGGCTCGTCGTCGCCCGAGGGCGAG
ATCCTGGGCGCCATGGGCCCCTCGGCGGCCAACAACCGCGGCGGCGACGTCCGCCGCGGGCCGTCCAACGCGTCG
TCGTCGTACAGCGCCGCGGCCCGGTCCGAGAACTCGGACGGCGGCCTGTACGGCAACGGCGCCACCTACTACGAG
CAGTACGGCCAGAACCCGTACAGCGAGCAGCGGCCCCAGGACCCGGCCAGCCAGGCCGTCATCCGCGACAACCCG
GCGCGGCGCAACACGCGCATCGAGAACTCGTCGCACTACCCCCAACAAAGCGCGGGCATCGCCCAGAACTTTTGA
Transcript >Hirsu2|4792
CTGCCGGCCGGCGGCAGCACGCCGTCGTCGGCGTCGGCGAGCGCGTCGACGGCCTCGTCGACGGCGTCGCCCGCC
GACCCCCCCAACGGCGGCGGCGGGTCGGGCGGCCTGAGCCAGCCGTCCCAGGTGGCCATCGGCGTCGTCGTGCCC
ATCGTCGCCATTGCCGTCCTGGCCGTCATCGGCCTCTTCTGGTGGAAGAAGAGGCGGGCGCGGCAGGAGGCCGAG
GAGGAGCGGCGCAAGGAGGTCGAGGACTACTCGTACAACCCCAACGCCGACCCGACGATGCCCTCGGTCGGACAG
CACTCGGCCGACAACTCGTACGAGATGAAGGAGGACGGCGCCATGGGCTACCGCGGCTGGGGCTCGACGGCGGCG
GCCGGCTCGACGGGCCGCAAGCCGTCGACGACCATGTCGGGCGGCGTGGCGGGCACCTACTCGGACGCGACGTCG
CCGACGCGCGTGCACACGTCCGAGGCCCGGTCGGCCGAGCCGCTGCTGGACGGCTCGTCGTCGCCCGAGGGCGAG
ATCCTGGGCGCCATGGGCCCCTCGGCGGCCAACAACCGCGGCGGCGACGTCCGCCGCGGGCCGTCCAACGCGTCG
TCGTCGTACAGCGCCGCGGCCCGGTCCGAGAACTCGGACGGCGGCCTGTACGGCAACGGCGCCACCTACTACGAG
CAGTACGGCCAGAACCCGTACAGCGAGCAGCGGCCCCAGGACCCGGCCAGCCAGGCCGTCATCCGCGACAACCCG
GCGCGGCGCAACACGCGCATCGAGAACTCGTCGCACTACCCCCAACAAAGCGCGGGCATCGCCCAGAACTTTTGA
Gene >Hirsu2|4792
CTGCCGGCCGGCGGCAGCACGCCGTCGTCGGCGTCGGCGAGCGCGTCGACGGCCTCGTCGACGGCGTCGCCCGCC
GACCCCCCCAACGGCGGCGGCGGGTCGGGCGGCCTGAGCCAGCCGTCCCAGGTGGCCATCGGCGTCGTCGTGCCC
ATCGTCGCCATTGCCGTCCTGGCCGTCATCGGCCTCTTCTGGTGGAAGAAGAGGCGGGCGCGGCAGGAGGCCGAG
GAGGAGCGGCGCAAGGAGGTCGAGGACTACTCGTACAACCCCAACGCCGACCCGACGATGCCCTCGGTCGGACAG
CACTCGGCCGACAACTCGTACGAGATGAAGGAGGACGGCGCCATGGGCTACCGCGGCTGGGGCTCGACGGCGGCG
GCCGGCTCGACGGGCCGCAAGCCGTCGACGACCATGTCGGGCGGCGTGGCGGGCACCTACTCGGACGCGACGTCG
CCGACGCGCGTGCACACGTCCGAGGCCCGGTCGGCCGAGCCGCTGCTGGACGGCTCGTCGTCGCCCGAGGGCGAG
ATCCTGGGCGCCATGGGCCCCTCGGCGGCCAACAACCGCGGCGGCGACGTCCGCCGCGGGCCGTCCAACGCGTCG
TCGTCGTACAGCGCCGCGGCCCGGTCCGAGAACTCGGACGGCGGCCTGTACGGCAACGGCGCCACCTACTACGAG
CAGTACGGCCAGAACCCGTACAGCGAGCAGCGGCCCCAGGACCCGGCCAGCCAGGCCGTCATCCGCGACAACCCG
GCGCGGCGCAACACGCGCATCGAGAACTCGTCGCACTACCCCCAACAAAGCGCGGGCATCGCCCAGAACTTTTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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