Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4761
Gene name
LocationContig_240:26315..27988
Strand-
Gene length (bp)1673
Transcript length (bp)1365
Coding sequence length (bp)1365
Protein length (aa) 455

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01039 Carboxyl_trans Carboxyl transferase domain 9.2E-130 4 436

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P34385|MCCB_CAEEL Probable methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Caenorhabditis elegans GN=F02A9.4 PE=3 SV=1 1 454 0.0E+00
sp|Q3ULD5|MCCB_MOUSE Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Mus musculus GN=Mccc2 PE=1 SV=1 1 454 0.0E+00
sp|Q5XIT9|MCCB_RAT Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus GN=Mccc2 PE=2 SV=1 1 454 0.0E+00
sp|Q8T2J9|MCCB_DICDI Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Dictyostelium discoideum GN=mccb PE=3 SV=2 1 454 0.0E+00
sp|Q9HCC0|MCCB_HUMAN Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Homo sapiens GN=MCCC2 PE=1 SV=1 1 454 0.0E+00
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Swissprot ID Swissprot Description Start End E-value
sp|P34385|MCCB_CAEEL Probable methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Caenorhabditis elegans GN=F02A9.4 PE=3 SV=1 1 454 0.0E+00
sp|Q3ULD5|MCCB_MOUSE Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Mus musculus GN=Mccc2 PE=1 SV=1 1 454 0.0E+00
sp|Q5XIT9|MCCB_RAT Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus GN=Mccc2 PE=2 SV=1 1 454 0.0E+00
sp|Q8T2J9|MCCB_DICDI Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Dictyostelium discoideum GN=mccb PE=3 SV=2 1 454 0.0E+00
sp|Q9HCC0|MCCB_HUMAN Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Homo sapiens GN=MCCC2 PE=1 SV=1 1 454 0.0E+00
sp|Q9V9A7|MCCB_DROME Probable methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Drosophila melanogaster GN=l(2)04524 PE=2 SV=1 1 454 0.0E+00
sp|Q9LDD8|MCCB_ARATH Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Arabidopsis thaliana GN=MCCB PE=2 SV=1 1 454 1.0E-178
sp|O31825|YNGE_BACSU Uncharacterized carboxylase YngE OS=Bacillus subtilis (strain 168) GN=yngE PE=3 SV=2 15 436 3.0E-91
sp|Q8GBW6|12S_PROFR Methylmalonyl-CoA carboxyltransferase 12S subunit OS=Propionibacterium freudenreichii subsp. shermanii PE=1 SV=3 12 449 2.0E-67
sp|Q3J4E3|PCCB_RHOS4 Propionyl-CoA carboxylase beta chain OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=pccB PE=1 SV=1 16 444 1.0E-64
sp|P53003|PCCB_SACEN Propionyl-CoA carboxylase beta chain OS=Saccharopolyspora erythraea (strain ATCC 11635 / DSM 40517 / JCM 4748 / NBRC 13426 / NCIMB 8594 / NRRL 2338) GN=pccB PE=3 SV=2 12 432 1.0E-63
sp|P54541|PCCB_BACSU Putative propionyl-CoA carboxylase beta chain OS=Bacillus subtilis (strain 168) GN=yqjD PE=3 SV=2 9 428 1.0E-62
sp|P9WQH7|PCC5_MYCTU Probable propionyl-CoA carboxylase beta chain 5 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=accD5 PE=1 SV=1 19 432 4.0E-57
sp|P9WQH6|PCC5_MYCTO Probable propionyl-CoA carboxylase beta chain 5 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=accD5 PE=3 SV=1 19 432 6.0E-57
sp|P79384|PCCB_PIG Propionyl-CoA carboxylase beta chain, mitochondrial OS=Sus scrofa GN=PCCB PE=2 SV=1 14 441 1.0E-55
sp|Q2TBR0|PCCB_BOVIN Propionyl-CoA carboxylase beta chain, mitochondrial OS=Bos taurus GN=PCCB PE=2 SV=1 14 441 2.0E-55
sp|P05166|PCCB_HUMAN Propionyl-CoA carboxylase beta chain, mitochondrial OS=Homo sapiens GN=PCCB PE=1 SV=3 14 441 7.0E-55
sp|P53002|PCCB_MYCLE Probable propionyl-CoA carboxylase beta chain 5 OS=Mycobacterium leprae (strain TN) GN=accD5 PE=3 SV=1 16 433 1.0E-54
sp|Q99MN9|PCCB_MOUSE Propionyl-CoA carboxylase beta chain, mitochondrial OS=Mus musculus GN=Pccb PE=1 SV=2 14 425 2.0E-54
sp|P07633|PCCB_RAT Propionyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus GN=Pccb PE=2 SV=1 14 425 2.0E-54
sp|Q06101|PCCB_RHOER Propionyl-CoA carboxylase beta chain OS=Rhodococcus erythropolis GN=pccB PE=3 SV=1 19 402 2.0E-42
sp|P9WQH5|PCC6_MYCTU Probable propionyl-CoA carboxylase beta chain 6 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=accD6 PE=1 SV=1 19 443 2.0E-40
sp|P9WQH4|PCC6_MYCTO Probable propionyl-CoA carboxylase beta chain 6 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=accD6 PE=1 SV=1 19 443 2.0E-40
sp|P63408|PCC6_MYCBO Probable propionyl-CoA carboxylase beta chain 6 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=accD6 PE=3 SV=1 19 443 2.0E-40
sp|Q06700|GCDA_ACIFV Glutaconyl-CoA decarboxylase subunit alpha OS=Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / VR4) GN=gcdA PE=1 SV=1 20 412 9.0E-34
sp|Q5QUD9|ACCD_IDILO Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta OS=Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR) GN=accD PE=3 SV=1 19 189 9.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 30 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4761
LSPLAGHELYAEAEVPAGGIITGVGVVEGVTCVVVANDSTVKGGTYYPITVKKHLRAQAVAQENKLPCIYLVDSG
GANLPHQADVFPDQNHFGRIFYNQARMSAQGIPQISVVMGPCTAGGAYVPAMSDEAIIVQDQGHIFLAGPPLVKA
ATGEVVSAEELGGGRMHSSVSGVTDYLAVDDGHALALARRCVANLNWPASAWSPAAEAEADAPLYDADELLGIAS
PNLRRPMPVREVIARVVDGSRFAEFKRDYGPTLVTGFASVHGHRVGLVANDGILFASAAAKGAHFVELCTQRGLP
LVFLQNIAGFMVGAAAERDGIAKHGAKLVTAVACADVPKFTVVLGGSYGAGNYGMCGRAYAPRFLWMWPNARVGV
MGGEQLAAVMETVGQKVDPELKARIDRESDATFSSARLWDDGIIPPQHTRRYLGLGLNAALGGRNQVKPGETKYG
VFRM*
Coding >Hirsu2|4761
CTGTCGCCGCTGGCGGGCCACGAGCTGTACGCCGAGGCCGAGGTGCCGGCCGGCGGCATCATCACCGGCGTCGGC
GTCGTCGAGGGCGTCACCTGCGTCGTCGTCGCCAACGACAGCACCGTCAAGGGCGGCACCTACTACCCCATCACC
GTCAAGAAGCACCTGCGCGCCCAGGCCGTCGCCCAGGAGAACAAGCTGCCCTGCATCTACCTCGTCGACTCGGGC
GGCGCCAACCTCCCGCACCAGGCCGACGTGTTCCCCGATCAGAACCACTTCGGGCGCATCTTCTACAACCAGGCG
CGCATGTCGGCGCAGGGCATCCCGCAGATCTCGGTCGTCATGGGGCCGTGCACGGCGGGCGGCGCCTACGTGCCG
GCCATGAGCGACGAGGCCATCATCGTCCAGGACCAGGGCCACATCTTCCTGGCCGGCCCGCCGCTCGTCAAGGCG
GCGACGGGCGAGGTCGTCTCGGCCGAGGAGCTGGGCGGCGGCCGCATGCACTCGTCCGTGTCGGGCGTGACCGAC
TACCTGGCCGTCGACGACGGCCACGCCCTGGCCCTGGCCCGCCGCTGCGTCGCCAACCTCAACTGGCCGGCCTCG
GCCTGGTCGCCGGCCGCCGAGGCCGAGGCCGACGCGCCCCTGTACGACGCCGACGAGCTGCTCGGCATCGCCTCG
CCCAACCTGCGCCGCCCGATGCCGGTGCGCGAGGTCATCGCCCGCGTCGTCGACGGCTCGCGCTTCGCCGAGTTC
AAGCGCGACTACGGCCCGACGCTCGTGACGGGCTTCGCCTCGGTCCACGGCCACCGCGTCGGCCTCGTCGCCAAC
GACGGCATCCTCTTCGCCTCGGCCGCCGCCAAGGGCGCCCACTTCGTCGAGCTCTGCACCCAGCGCGGCCTGCCC
CTCGTCTTCCTGCAGAACATCGCCGGCTTCATGGTCGGCGCCGCCGCCGAGCGCGACGGCATCGCCAAGCACGGC
GCCAAGCTCGTCACCGCCGTCGCCTGCGCCGACGTGCCCAAGTTCACCGTCGTCCTCGGCGGCTCCTACGGCGCC
GGCAACTACGGCATGTGCGGCCGCGCCTACGCGCCCCGCTTCCTCTGGATGTGGCCCAACGCCCGCGTCGGCGTC
ATGGGCGGCGAGCAGCTGGCCGCCGTCATGGAGACCGTCGGCCAGAAGGTCGACCCCGAGCTCAAGGCCCGCATC
GACCGCGAGAGCGACGCCACCTTTTCCTCCGCTCGCCTTTGGGACGATGGCATCATCCCTCCCCAGCACACCCGC
CGCTACCTCGGCCTAGGTCTCAACGCCGCCCTTGGAGGCCGCAATCAGGTCAAGCCGGGGGAGACAAAGTACGGC
GTCTTCAGGATGTAA
Transcript >Hirsu2|4761
CTGTCGCCGCTGGCGGGCCACGAGCTGTACGCCGAGGCCGAGGTGCCGGCCGGCGGCATCATCACCGGCGTCGGC
GTCGTCGAGGGCGTCACCTGCGTCGTCGTCGCCAACGACAGCACCGTCAAGGGCGGCACCTACTACCCCATCACC
GTCAAGAAGCACCTGCGCGCCCAGGCCGTCGCCCAGGAGAACAAGCTGCCCTGCATCTACCTCGTCGACTCGGGC
GGCGCCAACCTCCCGCACCAGGCCGACGTGTTCCCCGATCAGAACCACTTCGGGCGCATCTTCTACAACCAGGCG
CGCATGTCGGCGCAGGGCATCCCGCAGATCTCGGTCGTCATGGGGCCGTGCACGGCGGGCGGCGCCTACGTGCCG
GCCATGAGCGACGAGGCCATCATCGTCCAGGACCAGGGCCACATCTTCCTGGCCGGCCCGCCGCTCGTCAAGGCG
GCGACGGGCGAGGTCGTCTCGGCCGAGGAGCTGGGCGGCGGCCGCATGCACTCGTCCGTGTCGGGCGTGACCGAC
TACCTGGCCGTCGACGACGGCCACGCCCTGGCCCTGGCCCGCCGCTGCGTCGCCAACCTCAACTGGCCGGCCTCG
GCCTGGTCGCCGGCCGCCGAGGCCGAGGCCGACGCGCCCCTGTACGACGCCGACGAGCTGCTCGGCATCGCCTCG
CCCAACCTGCGCCGCCCGATGCCGGTGCGCGAGGTCATCGCCCGCGTCGTCGACGGCTCGCGCTTCGCCGAGTTC
AAGCGCGACTACGGCCCGACGCTCGTGACGGGCTTCGCCTCGGTCCACGGCCACCGCGTCGGCCTCGTCGCCAAC
GACGGCATCCTCTTCGCCTCGGCCGCCGCCAAGGGCGCCCACTTCGTCGAGCTCTGCACCCAGCGCGGCCTGCCC
CTCGTCTTCCTGCAGAACATCGCCGGCTTCATGGTCGGCGCCGCCGCCGAGCGCGACGGCATCGCCAAGCACGGC
GCCAAGCTCGTCACCGCCGTCGCCTGCGCCGACGTGCCCAAGTTCACCGTCGTCCTCGGCGGCTCCTACGGCGCC
GGCAACTACGGCATGTGCGGCCGCGCCTACGCGCCCCGCTTCCTCTGGATGTGGCCCAACGCCCGCGTCGGCGTC
ATGGGCGGCGAGCAGCTGGCCGCCGTCATGGAGACCGTCGGCCAGAAGGTCGACCCCGAGCTCAAGGCCCGCATC
GACCGCGAGAGCGACGCCACCTTTTCCTCCGCTCGCCTTTGGGACGATGGCATCATCCCTCCCCAGCACACCCGC
CGCTACCTCGGCCTAGGTCTCAACGCCGCCCTTGGAGGCCGCAATCAGGTCAAGCCGGGGGAGACAAAGTACGGC
GTCTTCAGGATGTAA
Gene >Hirsu2|4761
CTGTCGCCGCTGGCGGGCCACGAGCTGTACGCCGAGGCCGAGGTGCCGGCCGGCGGCATCATCACCGGCGTCGGC
GTCGTCGAGGGCGTCACCTGCGTCGTCGTCGCCAACGACAGCACCGTCAAGGGCGGCACCTACTACCCCATCACC
GTCAAGAAGCACCTGCGCGCCCAGGCCGTCGCCCAGGAGAACAAGCTGCCGTGAGTTCCCCTTCCCCCACCACCG
GCCGTGATCCGGATCTTGTTCCAAGAGGAGGAGGAAGAGGAGGAGGAGAGAGAGAGAGACGGAGAGTAGAAGAAA
AAGGCAGACGGCGACGGCGGCGGCGGCGGCTGACTTCCTCCCTCTTCCCCAAAAGCTGCATCTACCTCGTCGACT
CGGGCGGCGCCAACCTCCCGCACCAGGCCGACGTGTTCCCCGATCAGAACCACTTCGGGCGCATCTTCTACAACC
AGGCGCGCATGTCGGCGCAGGGCATCCCGCAGATCTCGGTCGTCATGGGGCCGTGCACGGCGGGCGGCGCCTACG
TGCCGGCCATGAGCGACGAGGCCATCATCGTCCAGGACCAGGGCCACATCTTCCTGGCCGGCCCGCCGCTCGTCA
AGGCGGCGACGGGCGAGGTCGTCTCGGCCGAGGAGCTGGGCGGCGGCCGCATGCACTCGTCCGTGTCGGGCGTGA
CCGACTACCTGGCCGTCGACGACGGCCACGCCCTGGCCCTGGCCCGCCGCTGCGTCGCCAACCTCAACTGGCCGG
CCTCGGCCTGGTCGCCGGCCGCCGAGGCCGAGGCCGACGCGCCCCTGTACGACGCCGACGAGCTGCTCGGCATCG
CCTCGCCCAACCTGCGCCGCCCGATGCCGGTGCGCGAGGTCATCGCCCGCGTCGTCGACGGCTCGCGCTTCGCCG
AGTTCAAGCGCGACTACGGCCCGACGCTCGTGACGGGCTTCGCCTCGGTCCACGGCCACCGCGTCGGCCTCGTCG
CCAACGACGGCATCCTCTTCGCCTCGGCCGCCGCCAAGGGCGCCCACTTCGTCGAGCTCTGCACCCAGCGCGGCC
TGCCCCTCGTCTTCCTGCAGAACATCGCCGGCTTCATGGTCGGCGCCGCCGCCGAGCGCGACGGCATCGCCAAGC
ACGGCGCCAAGCTCGTCACCGCCGTCGCCTGCGCCGACGTGCCCAAGTTCACCGTCGTCCTCGGCGGCTCCTACG
GCGCCGGCAACTACGGCATGTGCGGCCGCGCCTACGCGCCCCGCTTCCTCTGGATGTGGCCCAACGCCCGCGTCG
GCGTCATGGGCGGCGAGCAGCTGGCCGCCGTCATGGAGACCGTCGGCCAGAAGGTCGACCCCGAGCTCAAGGCCC
GCATCGACCGCGAGAGCGACGCCACCTTTTCCTCCGCTCGCCTTTGGGTACGATCCGACTCCAGCCCCCCCTGAC
CCTCAACCCCTTAACCTCAACCCCTAATCCTCAACTCTTAACCTCTCTACCCCTCCCCTGTCCGCATCCAATTCG
TTGCTGACCTCCCTCTCCTTCTCTCTCTGTTTCCGGTCCATCGCGCACAGGACGATGGCATCATCCCTCCCCAGC
ACACCCGCCGCTACCTCGGCCTAGGTCTCAACGCCGCCCTTGGAGGCCGCAATCAGGTCAAGCCGGGGGAGACAA
AGTACGGCGTCTTCAGGATGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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