© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|4755 |
| Gene name | |
| Location | Contig_240:6869..10028 |
| Strand | + |
| Gene length (bp) | 3159 |
| Transcript length (bp) | 3159 |
| Coding sequence length (bp) | 3159 |
| Protein length (aa) | 1053 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1777 | 0.1415 | 0.9574 | 0.2294 | 0.075 | 0.0134 | 0.2897 | 0.1512 | 0.1716 | 0.009 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 26 | 0.999752 |
| Orthofinder run ID | 4 |
| Orthogroup | 6647 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|4755 MRSPAPVPGLLLVLFHFLRLSTVAAGHEVGRLGVGSPRGVKHEHLEPRGTLRGYYGEPNSAYGYPTPYVDYNSIS AYHTPSNHGKLAVRFGRLLGLTASPDSSAYHSAYATSKSATAATTDTDSVTTWGNGGSTWQKPTSSSAVISFDSG TTDSRSSSAWTKISVSKSLPLTPSAATPTHSASSGLEMSSAARSETFFTNTEGRRSTYTTSMLGSSNSWPTALHT SQQSTGRSSPTGEISSETLDSTVLTLWTVTTLWGSGKDAPLPSSPVGSTAKLTVTKVISVTESTENAAKSDSGAS SFPSLSQLSSSPSSDAGTTSGLSRTVDSTSGTSHPESDSGDAFSTAISRTTTSSFSVSPSATATWQPDSSIRPSQ SFLSSHTSSQTLARSSTLTGDGSSVSTASLSVGTASSSIDAGTTEPQTPPPAAWTTFTVTSSPLTGSISPSSSQS QASPADTTETSRERGTETTETISRTDTLVGGLSSSSAQMVTLTSTLVRTVSRSSAADGEVTSENSGTSAWVTTRV AGQTGEQATTDSGLTTSYPSSVTAITLPITSFVERSTGSVSSLSKPSAESTSSASSSPVSGFISESSPLTLSSES APISPPTTQRLSTSAVTFSSSSLTYTYTSPKPPYPKAPSSATPPSPAGGPGSERTSHRSGNWSSSTINRPHASNS WVTRTIVPISSITASTAQISRLSGTIWSDSDNRASTKVPSAASSVSASGPGFSTGVLRTGHSTPGLSSAALSGAA TSRPAGGANATARATSDSGMRSETPKSLSRVTLTKKVTLTLQSDATETSTSVSASDRATAGPTPSWSPAPPPSPR RSWSSHRFPTHNATTVSGSGRGWQAPTEGPSHWRNATATRPWRTVVDGENESNAAPVQTAGTDTVCAEVGGQSSH PLGGSAATCTTIAGGMTTITTCSGAQTAVGSAPYTKASRNCTLSTCYTASGGSDVSGTTGMAPHSSWGALDSVVL TRPSAYTAGNDYPVPTTLVTQSRSQFGSGAQGTKAPSNPNYPWGGDSPVHRHQNVTQLSDGIIDVRTEEDDDDLR EP* |
| Coding | >Hirsu2|4755 ATGAGGTCCCCGGCCCCTGTGCCCGGCCTCTTGCTGGTTCTCTTTCATTTCTTGCGTCTCTCTACCGTGGCTGCG GGCCATGAGGTTGGTCGGCTTGGCGTCGGCTCTCCCCGTGGTGTCAAGCACGAACATTTGGAGCCTCGCGGCACC CTTCGTGGATACTACGGCGAGCCCAACTCTGCCTACGGCTATCCTACTCCCTATGTGGACTACAATTCGATATCT GCTTATCACACACCCTCGAATCATGGTAAGTTGGCCGTGCGCTTTGGTCGGCTCCTCGGGCTCACTGCGTCCCCA GACTCCTCTGCGTACCACTCCGCCTACGCGACATCAAAGTCGGCCACAGCCGCCACGACTGACACAGATTCGGTC ACCACTTGGGGCAACGGCGGTTCAACATGGCAGAAACCCACCTCTTCGTCTGCAGTCATCTCTTTCGACTCGGGA ACGACAGACTCCAGATCATCGTCTGCCTGGACAAAGATCTCAGTGTCAAAATCGCTACCATTGACTCCGTCCGCG GCAACTCCAACGCACTCGGCATCTTCAGGCCTGGAAATGTCGTCAGCTGCCCGATCAGAGACGTTCTTCACCAAC ACCGAAGGACGTCGCTCGACTTACACTACGTCGATGCTTGGCTCGTCAAATTCTTGGCCGACGGCTCTGCACACT TCCCAACAGTCAACAGGAAGATCGTCCCCGACAGGCGAAATCTCGAGCGAAACGCTAGATTCTACTGTGCTGACT TTGTGGACCGTGACCACTCTCTGGGGGTCTGGAAAAGACGCGCCGCTTCCGTCATCGCCTGTTGGGAGCACCGCA AAGCTTACGGTGACCAAGGTCATATCAGTCACCGAGTCGACAGAAAACGCCGCCAAATCTGACTCTGGGGCCTCC AGTTTCCCGAGCTTGAGCCAACTTTCGTCATCGCCTAGTTCGGATGCTGGTACGACGTCTGGCCTGTCCCGGACT GTGGACAGCACCAGTGGAACGTCACATCCTGAATCAGACTCTGGTGACGCTTTTTCTACGGCAATTTCAAGAACC ACGACCTCATCATTTTCAGTGTCTCCTAGTGCCACGGCCACATGGCAACCAGATAGCTCGATCCGGCCAAGCCAG AGCTTCCTTTCTTCCCACACAAGCTCACAAACTTTGGCAAGGTCCTCGACATTGACGGGGGATGGCTCGTCGGTC TCCACAGCGAGCTTGTCAGTGGGCACGGCAAGCAGCTCGATAGATGCTGGGACAACAGAACCTCAGACTCCGCCA CCAGCCGCATGGACAACATTCACGGTCACTTCTTCGCCTTTGACAGGATCTATTAGTCCATCAAGCTCTCAGTCG CAGGCTTCGCCTGCCGATACGACGGAGACGTCACGCGAAAGAGGCACAGAGACAACCGAGACGATATCCCGCACA GATACGCTCGTTGGCGGTCTGTCTTCCTCTTCGGCTCAGATGGTGACGTTGACTTCCACGCTTGTCCGAACAGTA TCCAGGTCCTCTGCCGCGGATGGAGAAGTGACGTCAGAGAATTCAGGCACGTCGGCTTGGGTTACCACGCGCGTT GCAGGCCAGACGGGAGAGCAAGCGACGACGGATAGTGGGCTCACGACCTCGTATCCTTCATCGGTCACGGCCATT ACTCTTCCTATAACTTCCTTCGTCGAACGCTCAACAGGATCCGTCTCGTCGCTCTCGAAACCTTCCGCCGAGTCG ACATCCAGTGCATCTAGCTCTCCGGTTTCAGGTTTCATCTCGGAGTCTTCTCCGCTGACGCTCAGTTCTGAGTCC GCACCTATTTCACCACCCACAACTCAACGGCTGTCGACGTCGGCTGTCACCTTCAGTTCAAGCTCCCTCACCTAC ACGTACACGTCGCCCAAGCCGCCATACCCTAAAGCCCCGAGCTCCGCGACGCCACCGTCACCTGCGGGTGGTCCG GGTTCTGAGCGGACCAGTCACAGGTCTGGAAACTGGAGTAGCTCGACGATCAATCGCCCCCATGCCTCGAATTCG TGGGTTACACGGACGATTGTACCTATTTCCTCCATCACGGCCAGCACCGCACAGATCTCTCGGCTCTCGGGCACA ATATGGAGCGATTCCGACAATAGGGCCTCGACGAAGGTGCCGTCCGCGGCCAGCTCCGTGTCAGCCTCCGGCCCA GGCTTCAGCACCGGCGTACTCAGAACCGGACACAGCACGCCGGGGCTATCCAGCGCAGCGTTATCTGGTGCCGCA ACCTCACGACCGGCGGGGGGGGCAAATGCCACGGCGAGGGCAACGTCAGACAGTGGGATGCGCTCCGAGACGCCA AAGAGTTTGTCGAGGGTGACGCTCACCAAAAAGGTGACGTTGACGTTGCAGTCGGATGCCACCGAGACGTCGACG TCTGTTTCGGCATCCGACAGGGCTACCGCAGGCCCCACTCCCTCATGGTCACCGGCGCCGCCCCCCAGCCCTAGA CGGTCATGGAGCTCGCACCGTTTCCCTACGCACAATGCTACGACGGTATCGGGATCAGGTAGGGGCTGGCAAGCG CCCACTGAGGGCCCGTCCCACTGGCGCAATGCAACGGCGACGAGGCCGTGGAGAACAGTCGTGGACGGAGAGAAT GAGAGCAACGCCGCGCCAGTCCAGACTGCTGGCACCGACACGGTCTGCGCAGAAGTCGGGGGGCAGAGCTCACAT CCTCTGGGGGGCAGCGCGGCAACGTGCACGACGATCGCTGGGGGCATGACGACGATAACGACATGCTCGGGCGCA CAGACTGCGGTTGGCTCTGCACCGTATACCAAGGCGTCTCGGAACTGCACATTGTCGACGTGCTACACGGCGTCA GGTGGCAGTGACGTGTCAGGCACGACAGGTATGGCGCCGCACAGCAGCTGGGGGGCACTGGATAGTGTTGTGCTA ACAAGACCCTCGGCATACACTGCAGGCAATGATTACCCTGTGCCGACGACATTGGTGACGCAAAGCCGTTCGCAG TTTGGTTCCGGTGCGCAGGGGACGAAAGCACCCAGCAACCCCAACTATCCGTGGGGCGGAGACTCGCCGGTTCAC CGACATCAGAACGTGACGCAGCTTAGCGATGGCATAATCGACGTGAGGACGGAGGAGGACGACGACGACCTGCGG GAGCCGTGA |
| Transcript | >Hirsu2|4755 ATGAGGTCCCCGGCCCCTGTGCCCGGCCTCTTGCTGGTTCTCTTTCATTTCTTGCGTCTCTCTACCGTGGCTGCG GGCCATGAGGTTGGTCGGCTTGGCGTCGGCTCTCCCCGTGGTGTCAAGCACGAACATTTGGAGCCTCGCGGCACC CTTCGTGGATACTACGGCGAGCCCAACTCTGCCTACGGCTATCCTACTCCCTATGTGGACTACAATTCGATATCT GCTTATCACACACCCTCGAATCATGGTAAGTTGGCCGTGCGCTTTGGTCGGCTCCTCGGGCTCACTGCGTCCCCA GACTCCTCTGCGTACCACTCCGCCTACGCGACATCAAAGTCGGCCACAGCCGCCACGACTGACACAGATTCGGTC ACCACTTGGGGCAACGGCGGTTCAACATGGCAGAAACCCACCTCTTCGTCTGCAGTCATCTCTTTCGACTCGGGA ACGACAGACTCCAGATCATCGTCTGCCTGGACAAAGATCTCAGTGTCAAAATCGCTACCATTGACTCCGTCCGCG GCAACTCCAACGCACTCGGCATCTTCAGGCCTGGAAATGTCGTCAGCTGCCCGATCAGAGACGTTCTTCACCAAC ACCGAAGGACGTCGCTCGACTTACACTACGTCGATGCTTGGCTCGTCAAATTCTTGGCCGACGGCTCTGCACACT TCCCAACAGTCAACAGGAAGATCGTCCCCGACAGGCGAAATCTCGAGCGAAACGCTAGATTCTACTGTGCTGACT TTGTGGACCGTGACCACTCTCTGGGGGTCTGGAAAAGACGCGCCGCTTCCGTCATCGCCTGTTGGGAGCACCGCA AAGCTTACGGTGACCAAGGTCATATCAGTCACCGAGTCGACAGAAAACGCCGCCAAATCTGACTCTGGGGCCTCC AGTTTCCCGAGCTTGAGCCAACTTTCGTCATCGCCTAGTTCGGATGCTGGTACGACGTCTGGCCTGTCCCGGACT GTGGACAGCACCAGTGGAACGTCACATCCTGAATCAGACTCTGGTGACGCTTTTTCTACGGCAATTTCAAGAACC ACGACCTCATCATTTTCAGTGTCTCCTAGTGCCACGGCCACATGGCAACCAGATAGCTCGATCCGGCCAAGCCAG AGCTTCCTTTCTTCCCACACAAGCTCACAAACTTTGGCAAGGTCCTCGACATTGACGGGGGATGGCTCGTCGGTC TCCACAGCGAGCTTGTCAGTGGGCACGGCAAGCAGCTCGATAGATGCTGGGACAACAGAACCTCAGACTCCGCCA CCAGCCGCATGGACAACATTCACGGTCACTTCTTCGCCTTTGACAGGATCTATTAGTCCATCAAGCTCTCAGTCG CAGGCTTCGCCTGCCGATACGACGGAGACGTCACGCGAAAGAGGCACAGAGACAACCGAGACGATATCCCGCACA GATACGCTCGTTGGCGGTCTGTCTTCCTCTTCGGCTCAGATGGTGACGTTGACTTCCACGCTTGTCCGAACAGTA TCCAGGTCCTCTGCCGCGGATGGAGAAGTGACGTCAGAGAATTCAGGCACGTCGGCTTGGGTTACCACGCGCGTT GCAGGCCAGACGGGAGAGCAAGCGACGACGGATAGTGGGCTCACGACCTCGTATCCTTCATCGGTCACGGCCATT ACTCTTCCTATAACTTCCTTCGTCGAACGCTCAACAGGATCCGTCTCGTCGCTCTCGAAACCTTCCGCCGAGTCG ACATCCAGTGCATCTAGCTCTCCGGTTTCAGGTTTCATCTCGGAGTCTTCTCCGCTGACGCTCAGTTCTGAGTCC GCACCTATTTCACCACCCACAACTCAACGGCTGTCGACGTCGGCTGTCACCTTCAGTTCAAGCTCCCTCACCTAC ACGTACACGTCGCCCAAGCCGCCATACCCTAAAGCCCCGAGCTCCGCGACGCCACCGTCACCTGCGGGTGGTCCG GGTTCTGAGCGGACCAGTCACAGGTCTGGAAACTGGAGTAGCTCGACGATCAATCGCCCCCATGCCTCGAATTCG TGGGTTACACGGACGATTGTACCTATTTCCTCCATCACGGCCAGCACCGCACAGATCTCTCGGCTCTCGGGCACA ATATGGAGCGATTCCGACAATAGGGCCTCGACGAAGGTGCCGTCCGCGGCCAGCTCCGTGTCAGCCTCCGGCCCA GGCTTCAGCACCGGCGTACTCAGAACCGGACACAGCACGCCGGGGCTATCCAGCGCAGCGTTATCTGGTGCCGCA ACCTCACGACCGGCGGGGGGGGCAAATGCCACGGCGAGGGCAACGTCAGACAGTGGGATGCGCTCCGAGACGCCA AAGAGTTTGTCGAGGGTGACGCTCACCAAAAAGGTGACGTTGACGTTGCAGTCGGATGCCACCGAGACGTCGACG TCTGTTTCGGCATCCGACAGGGCTACCGCAGGCCCCACTCCCTCATGGTCACCGGCGCCGCCCCCCAGCCCTAGA CGGTCATGGAGCTCGCACCGTTTCCCTACGCACAATGCTACGACGGTATCGGGATCAGGTAGGGGCTGGCAAGCG CCCACTGAGGGCCCGTCCCACTGGCGCAATGCAACGGCGACGAGGCCGTGGAGAACAGTCGTGGACGGAGAGAAT GAGAGCAACGCCGCGCCAGTCCAGACTGCTGGCACCGACACGGTCTGCGCAGAAGTCGGGGGGCAGAGCTCACAT CCTCTGGGGGGCAGCGCGGCAACGTGCACGACGATCGCTGGGGGCATGACGACGATAACGACATGCTCGGGCGCA CAGACTGCGGTTGGCTCTGCACCGTATACCAAGGCGTCTCGGAACTGCACATTGTCGACGTGCTACACGGCGTCA GGTGGCAGTGACGTGTCAGGCACGACAGGTATGGCGCCGCACAGCAGCTGGGGGGCACTGGATAGTGTTGTGCTA ACAAGACCCTCGGCATACACTGCAGGCAATGATTACCCTGTGCCGACGACATTGGTGACGCAAAGCCGTTCGCAG TTTGGTTCCGGTGCGCAGGGGACGAAAGCACCCAGCAACCCCAACTATCCGTGGGGCGGAGACTCGCCGGTTCAC CGACATCAGAACGTGACGCAGCTTAGCGATGGCATAATCGACGTGAGGACGGAGGAGGACGACGACGACCTGCGG GAGCCGTGA |
| Gene | >Hirsu2|4755 ATGAGGTCCCCGGCCCCTGTGCCCGGCCTCTTGCTGGTTCTCTTTCATTTCTTGCGTCTCTCTACCGTGGCTGCG GGCCATGAGGTTGGTCGGCTTGGCGTCGGCTCTCCCCGTGGTGTCAAGCACGAACATTTGGAGCCTCGCGGCACC CTTCGTGGATACTACGGCGAGCCCAACTCTGCCTACGGCTATCCTACTCCCTATGTGGACTACAATTCGATATCT GCTTATCACACACCCTCGAATCATGGTAAGTTGGCCGTGCGCTTTGGTCGGCTCCTCGGGCTCACTGCGTCCCCA GACTCCTCTGCGTACCACTCCGCCTACGCGACATCAAAGTCGGCCACAGCCGCCACGACTGACACAGATTCGGTC ACCACTTGGGGCAACGGCGGTTCAACATGGCAGAAACCCACCTCTTCGTCTGCAGTCATCTCTTTCGACTCGGGA ACGACAGACTCCAGATCATCGTCTGCCTGGACAAAGATCTCAGTGTCAAAATCGCTACCATTGACTCCGTCCGCG GCAACTCCAACGCACTCGGCATCTTCAGGCCTGGAAATGTCGTCAGCTGCCCGATCAGAGACGTTCTTCACCAAC ACCGAAGGACGTCGCTCGACTTACACTACGTCGATGCTTGGCTCGTCAAATTCTTGGCCGACGGCTCTGCACACT TCCCAACAGTCAACAGGAAGATCGTCCCCGACAGGCGAAATCTCGAGCGAAACGCTAGATTCTACTGTGCTGACT TTGTGGACCGTGACCACTCTCTGGGGGTCTGGAAAAGACGCGCCGCTTCCGTCATCGCCTGTTGGGAGCACCGCA AAGCTTACGGTGACCAAGGTCATATCAGTCACCGAGTCGACAGAAAACGCCGCCAAATCTGACTCTGGGGCCTCC AGTTTCCCGAGCTTGAGCCAACTTTCGTCATCGCCTAGTTCGGATGCTGGTACGACGTCTGGCCTGTCCCGGACT GTGGACAGCACCAGTGGAACGTCACATCCTGAATCAGACTCTGGTGACGCTTTTTCTACGGCAATTTCAAGAACC ACGACCTCATCATTTTCAGTGTCTCCTAGTGCCACGGCCACATGGCAACCAGATAGCTCGATCCGGCCAAGCCAG AGCTTCCTTTCTTCCCACACAAGCTCACAAACTTTGGCAAGGTCCTCGACATTGACGGGGGATGGCTCGTCGGTC TCCACAGCGAGCTTGTCAGTGGGCACGGCAAGCAGCTCGATAGATGCTGGGACAACAGAACCTCAGACTCCGCCA CCAGCCGCATGGACAACATTCACGGTCACTTCTTCGCCTTTGACAGGATCTATTAGTCCATCAAGCTCTCAGTCG CAGGCTTCGCCTGCCGATACGACGGAGACGTCACGCGAAAGAGGCACAGAGACAACCGAGACGATATCCCGCACA GATACGCTCGTTGGCGGTCTGTCTTCCTCTTCGGCTCAGATGGTGACGTTGACTTCCACGCTTGTCCGAACAGTA TCCAGGTCCTCTGCCGCGGATGGAGAAGTGACGTCAGAGAATTCAGGCACGTCGGCTTGGGTTACCACGCGCGTT GCAGGCCAGACGGGAGAGCAAGCGACGACGGATAGTGGGCTCACGACCTCGTATCCTTCATCGGTCACGGCCATT ACTCTTCCTATAACTTCCTTCGTCGAACGCTCAACAGGATCCGTCTCGTCGCTCTCGAAACCTTCCGCCGAGTCG ACATCCAGTGCATCTAGCTCTCCGGTTTCAGGTTTCATCTCGGAGTCTTCTCCGCTGACGCTCAGTTCTGAGTCC GCACCTATTTCACCACCCACAACTCAACGGCTGTCGACGTCGGCTGTCACCTTCAGTTCAAGCTCCCTCACCTAC ACGTACACGTCGCCCAAGCCGCCATACCCTAAAGCCCCGAGCTCCGCGACGCCACCGTCACCTGCGGGTGGTCCG GGTTCTGAGCGGACCAGTCACAGGTCTGGAAACTGGAGTAGCTCGACGATCAATCGCCCCCATGCCTCGAATTCG TGGGTTACACGGACGATTGTACCTATTTCCTCCATCACGGCCAGCACCGCACAGATCTCTCGGCTCTCGGGCACA ATATGGAGCGATTCCGACAATAGGGCCTCGACGAAGGTGCCGTCCGCGGCCAGCTCCGTGTCAGCCTCCGGCCCA GGCTTCAGCACCGGCGTACTCAGAACCGGACACAGCACGCCGGGGCTATCCAGCGCAGCGTTATCTGGTGCCGCA ACCTCACGACCGGCGGGGGGGGCAAATGCCACGGCGAGGGCAACGTCAGACAGTGGGATGCGCTCCGAGACGCCA AAGAGTTTGTCGAGGGTGACGCTCACCAAAAAGGTGACGTTGACGTTGCAGTCGGATGCCACCGAGACGTCGACG TCTGTTTCGGCATCCGACAGGGCTACCGCAGGCCCCACTCCCTCATGGTCACCGGCGCCGCCCCCCAGCCCTAGA CGGTCATGGAGCTCGCACCGTTTCCCTACGCACAATGCTACGACGGTATCGGGATCAGGTAGGGGCTGGCAAGCG CCCACTGAGGGCCCGTCCCACTGGCGCAATGCAACGGCGACGAGGCCGTGGAGAACAGTCGTGGACGGAGAGAAT GAGAGCAACGCCGCGCCAGTCCAGACTGCTGGCACCGACACGGTCTGCGCAGAAGTCGGGGGGCAGAGCTCACAT CCTCTGGGGGGCAGCGCGGCAACGTGCACGACGATCGCTGGGGGCATGACGACGATAACGACATGCTCGGGCGCA CAGACTGCGGTTGGCTCTGCACCGTATACCAAGGCGTCTCGGAACTGCACATTGTCGACGTGCTACACGGCGTCA GGTGGCAGTGACGTGTCAGGCACGACAGGTATGGCGCCGCACAGCAGCTGGGGGGCACTGGATAGTGTTGTGCTA ACAAGACCCTCGGCATACACTGCAGGCAATGATTACCCTGTGCCGACGACATTGGTGACGCAAAGCCGTTCGCAG TTTGGTTCCGGTGCGCAGGGGACGAAAGCACCCAGCAACCCCAACTATCCGTGGGGCGGAGACTCGCCGGTTCAC CGACATCAGAACGTGACGCAGCTTAGCGATGGCATAATCGACGTGAGGACGGAGGAGGACGACGACGACCTGCGG GAGCCGTGA |