© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|4754 |
| Gene name | |
| Location | Contig_240:3848..5175 |
| Strand | + |
| Gene length (bp) | 1327 |
| Transcript length (bp) | 906 |
| Coding sequence length (bp) | 906 |
| Protein length (aa) | 302 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07264 | EI24 | Etoposide-induced protein 2.4 (EI24) | 3.1E-12 | 50 | 263 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q08219|RRT8_YEAST | Outer spore wall protein RRT8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RRT8 PE=1 SV=2 | 41 | 278 | 1.0E-15 |
| sp|P31379|LDS1_YEAST | Outer spore wall protein LDS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LDS1 PE=1 SV=1 | 41 | 290 | 1.0E-10 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 30 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 68 | 90 | 22 |
| 2 | 94 | 116 | 22 |
| 3 | 188 | 210 | 22 |
| 4 | 243 | 265 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|4754 MPDSSPAGGQSRRGRVVDALGDKAQQVLAEDYGRARTVAFDALRSRAYLYPFKGIAYFATHRSLWRPLLSRLGPY LGLSASVVGGMFAFTYLPQLAVLVLVNGPLAVASTVLLVLSESAAVVNVLARGWILQDAVLDTFDGTLLARGATG AVSEGRELRPGGGEPMQRLGRILKSPFDRLGPKALIRYFIYLPLNFIPVVGTAIFIFLQGRNRGHVVHDRYFQLK KWSKSQRASWLEKHTGPYTSFGLIATVLEMIPLASLFFTFTNTVGAALWAADIEALQTSMTDDTAPSLRETAKKV E* |
| Coding | >Hirsu2|4754 ATGCCCGACTCCAGCCCAGCCGGCGGCCAGTCGAGGCGCGGGCGCGTCGTCGACGCTCTTGGCGACAAGGCGCAG CAGGTCCTGGCGGAGGACTACGGCCGGGCGAGGACGGTCGCCTTCGATGCGCTCCGGAGCAGGGCCTACCTGTAT CCCTTCAAGGGCATCGCCTACTTCGCGACGCACCGCTCGCTCTGGCGGCCGCTGCTGTCGCGGCTGGGGCCGTAC CTCGGCCTGTCGGCCAGCGTGGTGGGCGGCATGTTCGCCTTCACCTACCTGCCGCAGCTGGCGGTGCTGGTGCTG GTCAACGGGCCGCTGGCGGTGGCGAGCACGGTGCTGCTGGTGCTCAGCGAGAGCGCGGCCGTGGTCAACGTGCTG GCGCGCGGCTGGATCTTGCAAGACGCCGTGCTCGACACCTTCGACGGCACGCTGCTGGCGCGCGGCGCCACTGGT GCCGTGAGCGAGGGCCGCGAGCTGCGCCCCGGCGGCGGCGAGCCCATGCAGCGCCTCGGCCGCATCCTCAAGAGC CCCTTTGACCGCCTCGGGCCCAAGGCCCTGATCCGCTACTTCATCTACCTGCCGCTCAACTTCATCCCCGTCGTC GGCACCGCCATCTTCATCTTTCTGCAAGGGCGTAACCGTGGCCACGTGGTTCACGATCGGTACTTCCAGCTGAAG AAGTGGTCCAAGTCTCAGCGAGCGAGTTGGCTGGAAAAGCACACCGGCCCTTACACGTCCTTTGGCCTCATCGCA ACTGTGCTCGAGATGATACCGCTGGCTTCGCTATTCTTTACCTTTACCAACACCGTCGGCGCGGCGCTCTGGGCA GCCGACATTGAGGCGCTCCAAACATCCATGACGGACGACACTGCTCCTTCGCTGCGGGAGACAGCAAAGAAGGTC GAGTAA |
| Transcript | >Hirsu2|4754 ATGCCCGACTCCAGCCCAGCCGGCGGCCAGTCGAGGCGCGGGCGCGTCGTCGACGCTCTTGGCGACAAGGCGCAG CAGGTCCTGGCGGAGGACTACGGCCGGGCGAGGACGGTCGCCTTCGATGCGCTCCGGAGCAGGGCCTACCTGTAT CCCTTCAAGGGCATCGCCTACTTCGCGACGCACCGCTCGCTCTGGCGGCCGCTGCTGTCGCGGCTGGGGCCGTAC CTCGGCCTGTCGGCCAGCGTGGTGGGCGGCATGTTCGCCTTCACCTACCTGCCGCAGCTGGCGGTGCTGGTGCTG GTCAACGGGCCGCTGGCGGTGGCGAGCACGGTGCTGCTGGTGCTCAGCGAGAGCGCGGCCGTGGTCAACGTGCTG GCGCGCGGCTGGATCTTGCAAGACGCCGTGCTCGACACCTTCGACGGCACGCTGCTGGCGCGCGGCGCCACTGGT GCCGTGAGCGAGGGCCGCGAGCTGCGCCCCGGCGGCGGCGAGCCCATGCAGCGCCTCGGCCGCATCCTCAAGAGC CCCTTTGACCGCCTCGGGCCCAAGGCCCTGATCCGCTACTTCATCTACCTGCCGCTCAACTTCATCCCCGTCGTC GGCACCGCCATCTTCATCTTTCTGCAAGGGCGTAACCGTGGCCACGTGGTTCACGATCGGTACTTCCAGCTGAAG AAGTGGTCCAAGTCTCAGCGAGCGAGTTGGCTGGAAAAGCACACCGGCCCTTACACGTCCTTTGGCCTCATCGCA ACTGTGCTCGAGATGATACCGCTGGCTTCGCTATTCTTTACCTTTACCAACACCGTCGGCGCGGCGCTCTGGGCA GCCGACATTGAGGCGCTCCAAACATCCATGACGGACGACACTGCTCCTTCGCTGCGGGAGACAGCAAAGAAGGTC GAGTAA |
| Gene | >Hirsu2|4754 ATGCCCGACTCCAGCCCAGCCGGCGGCCAGTCGAGGCGCGGGCGCGTCGTCGACGCTCTTGGCGACAAGGCGCAG CAGGTCCTGTGCGTGTCCTTCTCTCCCCGATCGTCCCGTCGATTTCCCTCGGGTCGCTCGTTTGCGCCTTCGTGC GAGGGCAATTGCTGATGGCGTGCCGGCAGGGCGGAGGACTACGGCCGGGCGAGGACGGTCGCCTTCGATGCGCTC CGGAGCAGGGCCTACCTGTATCCCTTCAAGGTGAGAGAGAAGGGCCGTGTGTTCGCGTCGGGTAGAGCGCTGACA TCCTCCGCAGGGCATCGCCTACTTCGCGACGCACCGCTCGCTCTGGCGGCCGCTGCTGTCGCGGCTGGGGCCGTA CCTCGGCCTGTCGGCCAGCGTGGTGGGCGGCATGTTCGCCTTCACCTACCTGCCGCAGCTGGCGGTGCTGGTGCT GGTCAACGGGCCGCTGGCGGTGGCGAGCACGGTGCTGCTGGTGCTCAGCGAGAGCGCGGCCGTGGTCAACGTGCT GGCGCGCGGCTGGATCTTGCAAGACGCCGTGCTCGACACCTTCGACGGCACGCTGCTGGCGCGCGGCGCCACTGG TGCCGTGAGCGAGGGCCGCGAGCTGCGCCCCGGCGGCGGCGAGCCCATGCAGCGCCTCGGCCGCATCCTCAAGAG CCCCTTTGACCGCCTCGGGCCCAAGGCCCTGATCCGCTACTTCATCTACCTGCCGCTCAACTTCATCCCCGTCGT CGGCACCGCCATCTTCATCTTTCTGCAAGGTTTGTTCTCGTCATCCCCTGCCCTGTCGTGCCGTGTGCTGACGGA CGGGGGTCCGCCGCCTTGTCTAGGGCGTAACCGTGGCCACGTGGTTCACGATCGGGTGAGAGGTCGTCCGCGTCC CGACCTTCGAAGCATGAGCTGACGACGGCGGTTGCCGATGCAGTACTTCCAGCTGAAGAAGTGGTCCAAGTCTCA GCGAGCGAGTTGGCTGGAAAAGCACACCGGCCCTTACACGTCGTGAGTCACGCCCACGGCAGAGGGCGCGGCTTC CAAGTCGGCCTGATACCAACATCACTGGCCATCCGCTGACGTCGAGTCTCGTAGCTTTGGCCTCATCGCAACTGT GCTCGAGATGATACCGCTGGCTTCGCTATTCTTTACCTTTACCAACACCGGTGAGAGCCTCTGTACGCCTCCCTT GATCATAGTTTTGCTAACCGATTCAGTCGGCGCGGCGCTCTGGGCAGCCGACATTGAGGCGCTCCAAACATCCAT GACGGACGACACTGCTCCTTCGCTGCGGGAGACAGCAAAGAAGGTCGAGTAA |