Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|475
Gene name
LocationContig_1096:5350..6827
Strand-
Gene length (bp)1477
Transcript length (bp)1404
Coding sequence length (bp)1404
Protein length (aa) 468

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11204 DUF2985 Protein of unknown function (DUF2985) 6.4E-39 194 276

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 28 0.45

Transmembrane Domains

Domain # Start End Length
1 200 222 22
2 352 374 22
3 384 406 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|475
MPPADRAEPVDAPPDRPPPSPPPSPPPSARLLSEPPSGDGDDDAVLAVASGAIVSSSSGHGLRRTSTTTTSAPRH
RGAPTVAADPSSSPHMALRLHDLPPASSAGSSTVDMRADDDASRPRSQQQQQQQQHHQPASALGTGVLKDGAGPD
TMLQETAVLVAEPAAAAPFPNGYHFPPKHSFGESMRLGCAAFAKFVLTPFGFLVTVYGLNIVAWGGMLFLLICNA
APAMCVPTCDDINSPKKVWVEIDSQILNALFCVTGFGLAPWRFRDLYFLMQHRLRGDYKALRRLAGIYRGWFRLD
GSEELPVHIGPDNVGQATAREAPRTAIPFPEHKIPNAPLTGTRAPASRLWKLDLVIWLNVWNTFFQCLLAGFMWG
MNRFNRPGWATGLFIGLGCGVSIVAGVIILMDGKAVKSIEGVPVSDRDLDRLEKDRERGIWHFNNLKDEDPSKKK
QKKQKKRKKNEGLELGE*
Coding >Hirsu2|475
ATGCCGCCTGCTGACCGCGCCGAGCCCGTCGACGCTCCCCCCGACCGTCCGCCGCCGTCGCCGCCGCCGTCGCCA
CCGCCCTCCGCCCGCCTCCTCTCCGAGCCGCCGTCCGGCGACGGCGACGACGACGCCGTGCTCGCCGTCGCCTCG
GGCGCCATCGTCTCGTCCTCCAGCGGCCACGGCCTGCGTCGCACCTCCACTACCACCACCTCGGCGCCTCGACAC
CGCGGCGCCCCGACTGTCGCCGCCGACCCTTCGTCGTCGCCGCACATGGCCTTGCGCCTCCACGATCTGCCGCCC
GCCTCGTCGGCCGGCTCGTCCACGGTTGACATGCGCGCCGACGACGACGCGTCGCGCCCTCGCAGCCAGCAGCAG
CAGCAGCAGCAGCAACACCACCAGCCCGCCTCCGCCCTCGGCACCGGCGTCCTCAAGGACGGCGCCGGCCCCGAC
ACGATGCTGCAGGAGACGGCCGTGCTCGTCGCCGAGCCCGCCGCCGCCGCGCCCTTCCCCAATGGCTACCACTTC
CCGCCCAAGCACTCGTTTGGCGAGTCGATGAGGCTCGGCTGCGCCGCCTTCGCCAAGTTCGTCCTGACGCCCTTC
GGCTTCCTCGTCACCGTCTATGGCCTCAACATCGTCGCCTGGGGCGGCATGCTGTTCCTGCTCATCTGCAATGCC
GCGCCTGCCATGTGCGTGCCGACCTGCGACGACATCAACTCGCCCAAGAAGGTGTGGGTCGAGATCGACTCCCAA
ATCCTCAACGCCCTCTTCTGCGTCACCGGCTTCGGCCTGGCGCCCTGGCGCTTCCGGGACCTGTACTTCCTCATG
CAGCATCGGCTCCGCGGCGACTACAAGGCCCTGAGGCGCCTCGCCGGCATCTACCGCGGATGGTTTCGCCTCGAC
GGCTCCGAGGAGCTGCCCGTTCACATCGGGCCCGACAACGTGGGCCAGGCGACGGCCCGGGAGGCGCCGCGGACC
GCCATTCCCTTCCCCGAACATAAGATCCCGAACGCGCCCCTCACCGGGACGCGGGCCCCGGCCAGCCGGCTCTGG
AAGTTGGACCTCGTTATCTGGCTCAACGTGTGGAACACCTTCTTTCAGTGCCTGCTCGCCGGCTTCATGTGGGGC
ATGAACCGCTTCAATCGGCCGGGCTGGGCCACCGGCCTCTTCATCGGCCTCGGCTGCGGCGTCTCCATCGTCGCC
GGCGTCATCATCCTGATGGACGGCAAGGCGGTCAAGAGCATCGAGGGCGTGCCCGTCAGCGACCGCGACCTGGAC
CGGCTCGAGAAGGACCGCGAGCGCGGCATCTGGCACTTCAACAACCTCAAGGACGAGGACCCCAGCAAGAAGAAG
CAGAAGAAGCAGAAGAAGAGAAAGAAGAACGAGGGCTTGGAGCTGGGCGAGTGA
Transcript >Hirsu2|475
ATGCCGCCTGCTGACCGCGCCGAGCCCGTCGACGCTCCCCCCGACCGTCCGCCGCCGTCGCCGCCGCCGTCGCCA
CCGCCCTCCGCCCGCCTCCTCTCCGAGCCGCCGTCCGGCGACGGCGACGACGACGCCGTGCTCGCCGTCGCCTCG
GGCGCCATCGTCTCGTCCTCCAGCGGCCACGGCCTGCGTCGCACCTCCACTACCACCACCTCGGCGCCTCGACAC
CGCGGCGCCCCGACTGTCGCCGCCGACCCTTCGTCGTCGCCGCACATGGCCTTGCGCCTCCACGATCTGCCGCCC
GCCTCGTCGGCCGGCTCGTCCACGGTTGACATGCGCGCCGACGACGACGCGTCGCGCCCTCGCAGCCAGCAGCAG
CAGCAGCAGCAGCAACACCACCAGCCCGCCTCCGCCCTCGGCACCGGCGTCCTCAAGGACGGCGCCGGCCCCGAC
ACGATGCTGCAGGAGACGGCCGTGCTCGTCGCCGAGCCCGCCGCCGCCGCGCCCTTCCCCAATGGCTACCACTTC
CCGCCCAAGCACTCGTTTGGCGAGTCGATGAGGCTCGGCTGCGCCGCCTTCGCCAAGTTCGTCCTGACGCCCTTC
GGCTTCCTCGTCACCGTCTATGGCCTCAACATCGTCGCCTGGGGCGGCATGCTGTTCCTGCTCATCTGCAATGCC
GCGCCTGCCATGTGCGTGCCGACCTGCGACGACATCAACTCGCCCAAGAAGGTGTGGGTCGAGATCGACTCCCAA
ATCCTCAACGCCCTCTTCTGCGTCACCGGCTTCGGCCTGGCGCCCTGGCGCTTCCGGGACCTGTACTTCCTCATG
CAGCATCGGCTCCGCGGCGACTACAAGGCCCTGAGGCGCCTCGCCGGCATCTACCGCGGATGGTTTCGCCTCGAC
GGCTCCGAGGAGCTGCCCGTTCACATCGGGCCCGACAACGTGGGCCAGGCGACGGCCCGGGAGGCGCCGCGGACC
GCCATTCCCTTCCCCGAACATAAGATCCCGAACGCGCCCCTCACCGGGACGCGGGCCCCGGCCAGCCGGCTCTGG
AAGTTGGACCTCGTTATCTGGCTCAACGTGTGGAACACCTTCTTTCAGTGCCTGCTCGCCGGCTTCATGTGGGGC
ATGAACCGCTTCAATCGGCCGGGCTGGGCCACCGGCCTCTTCATCGGCCTCGGCTGCGGCGTCTCCATCGTCGCC
GGCGTCATCATCCTGATGGACGGCAAGGCGGTCAAGAGCATCGAGGGCGTGCCCGTCAGCGACCGCGACCTGGAC
CGGCTCGAGAAGGACCGCGAGCGCGGCATCTGGCACTTCAACAACCTCAAGGACGAGGACCCCAGCAAGAAGAAG
CAGAAGAAGCAGAAGAAGAGAAAGAAGAACGAGGGCTTGGAGCTGGGCGAGTGA
Gene >Hirsu2|475
ATGCCGCCTGCTGACCGCGCCGAGCCCGTCGACGCTCCCCCCGACCGTCCGCCGCCGTCGCCGCCGCCGTCGCCA
CCGCCCTCCGCCCGCCTCCTCTCCGAGCCGCCGTCCGGCGACGGCGACGACGACGCCGTGCTCGCCGTCGCCTCG
GGCGCCATCGTCTCGTCCTCCAGCGGCCACGGCCTGCGTCGCACCTCCACTACCACCACCTCGGCGCCTCGACAC
CGCGGCGCCCCGACTGTCGCCGCCGACCCTTCGTCGTCGCCGCACATGGCCTTGCGCCTCCACGATCTGCCGCCC
GCCTCGTCGGCCGGCTCGTCCACGGTTGACATGCGCGCCGACGACGACGCGTCGCGCCCTCGCAGCCAGCAGCAG
CAGCAGCAGCAGCAACACCACCAGCCCGCCTCCGCCCTCGGCACCGGCGTCCTCAAGGACGGCGCCGGCCCCGAC
ACGATGCTGCAGGAGACGGCCGTGCTCGTCGCCGAGCCCGCCGCCGCCGCGCCCTTCCCCAATGGCTACCACTTC
CCGCCCAAGCACTCGTTTGGCGAGTCGATGAGGCTCGGCTGCGCCGCCTTCGCCAAGTTCGTCCTGACGCCCTTC
GGCTTCCTCGTCACCGTCTATGGCCTCAACATCGTCGCCTGGGGCGGCATGCTGTTCCTGCTCATCTGCAATGCC
GGTCGGTCGTCCCCCCTTGCCCTGAGTCTCGCTGCTGGCCGAAAAGACGTCGTGCTGACTTTCTCTTTTTTCAGC
GCCTGCCATGTGCGTGCCGACCTGCGACGACATCAACTCGCCCAAGAAGGTGTGGGTCGAGATCGACTCCCAAAT
CCTCAACGCCCTCTTCTGCGTCACCGGCTTCGGCCTGGCGCCCTGGCGCTTCCGGGACCTGTACTTCCTCATGCA
GCATCGGCTCCGCGGCGACTACAAGGCCCTGAGGCGCCTCGCCGGCATCTACCGCGGATGGTTTCGCCTCGACGG
CTCCGAGGAGCTGCCCGTTCACATCGGGCCCGACAACGTGGGCCAGGCGACGGCCCGGGAGGCGCCGCGGACCGC
CATTCCCTTCCCCGAACATAAGATCCCGAACGCGCCCCTCACCGGGACGCGGGCCCCGGCCAGCCGGCTCTGGAA
GTTGGACCTCGTTATCTGGCTCAACGTGTGGAACACCTTCTTTCAGTGCCTGCTCGCCGGCTTCATGTGGGGCAT
GAACCGCTTCAATCGGCCGGGCTGGGCCACCGGCCTCTTCATCGGCCTCGGCTGCGGCGTCTCCATCGTCGCCGG
CGTCATCATCCTGATGGACGGCAAGGCGGTCAAGAGCATCGAGGGCGTGCCCGTCAGCGACCGCGACCTGGACCG
GCTCGAGAAGGACCGCGAGCGCGGCATCTGGCACTTCAACAACCTCAAGGACGAGGACCCCAGCAAGAAGAAGCA
GAAGAAGCAGAAGAAGAGAAAGAAGAACGAGGGCTTGGAGCTGGGCGAGTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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