© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|475 |
| Gene name | |
| Location | Contig_1096:5350..6827 |
| Strand | - |
| Gene length (bp) | 1477 |
| Transcript length (bp) | 1404 |
| Coding sequence length (bp) | 1404 |
| Protein length (aa) | 468 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF11204 | DUF2985 | Protein of unknown function (DUF2985) | 4.9E-39 | 194 | 276 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 28 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 200 | 222 | 22 |
| 2 | 352 | 374 | 22 |
| 3 | 384 | 406 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|475 MPPADRAEPVDAPPDRPPPSPPPSPPPSARLLSEPPSGDGDDDAVLAVASGAIVSSSSGHGLRRTSTTTTSAPRH RGAPTVAADPSSSPHMALRLHDLPPASSAGSSTVDMRADDDASRPRSQQQQQQQQHHQPASALGTGVLKDGAGPD TMLQETAVLVAEPAAAAPFPNGYHFPPKHSFGESMRLGCAAFAKFVLTPFGFLVTVYGLNIVAWGGMLFLLICNA APAMCVPTCDDINSPKKVWVEIDSQILNALFCVTGFGLAPWRFRDLYFLMQHRLRGDYKALRRLAGIYRGWFRLD GSEELPVHIGPDNVGQATAREAPRTAIPFPEHKIPNAPLTGTRAPASRLWKLDLVIWLNVWNTFFQCLLAGFMWG MNRFNRPGWATGLFIGLGCGVSIVAGVIILMDGKAVKSIEGVPVSDRDLDRLEKDRERGIWHFNNLKDEDPSKKK QKKQKKRKKNEGLELGE* |
| Coding | >Hirsu2|475 ATGCCGCCTGCTGACCGCGCCGAGCCCGTCGACGCTCCCCCCGACCGTCCGCCGCCGTCGCCGCCGCCGTCGCCA CCGCCCTCCGCCCGCCTCCTCTCCGAGCCGCCGTCCGGCGACGGCGACGACGACGCCGTGCTCGCCGTCGCCTCG GGCGCCATCGTCTCGTCCTCCAGCGGCCACGGCCTGCGTCGCACCTCCACTACCACCACCTCGGCGCCTCGACAC CGCGGCGCCCCGACTGTCGCCGCCGACCCTTCGTCGTCGCCGCACATGGCCTTGCGCCTCCACGATCTGCCGCCC GCCTCGTCGGCCGGCTCGTCCACGGTTGACATGCGCGCCGACGACGACGCGTCGCGCCCTCGCAGCCAGCAGCAG CAGCAGCAGCAGCAACACCACCAGCCCGCCTCCGCCCTCGGCACCGGCGTCCTCAAGGACGGCGCCGGCCCCGAC ACGATGCTGCAGGAGACGGCCGTGCTCGTCGCCGAGCCCGCCGCCGCCGCGCCCTTCCCCAATGGCTACCACTTC CCGCCCAAGCACTCGTTTGGCGAGTCGATGAGGCTCGGCTGCGCCGCCTTCGCCAAGTTCGTCCTGACGCCCTTC GGCTTCCTCGTCACCGTCTATGGCCTCAACATCGTCGCCTGGGGCGGCATGCTGTTCCTGCTCATCTGCAATGCC GCGCCTGCCATGTGCGTGCCGACCTGCGACGACATCAACTCGCCCAAGAAGGTGTGGGTCGAGATCGACTCCCAA ATCCTCAACGCCCTCTTCTGCGTCACCGGCTTCGGCCTGGCGCCCTGGCGCTTCCGGGACCTGTACTTCCTCATG CAGCATCGGCTCCGCGGCGACTACAAGGCCCTGAGGCGCCTCGCCGGCATCTACCGCGGATGGTTTCGCCTCGAC GGCTCCGAGGAGCTGCCCGTTCACATCGGGCCCGACAACGTGGGCCAGGCGACGGCCCGGGAGGCGCCGCGGACC GCCATTCCCTTCCCCGAACATAAGATCCCGAACGCGCCCCTCACCGGGACGCGGGCCCCGGCCAGCCGGCTCTGG AAGTTGGACCTCGTTATCTGGCTCAACGTGTGGAACACCTTCTTTCAGTGCCTGCTCGCCGGCTTCATGTGGGGC ATGAACCGCTTCAATCGGCCGGGCTGGGCCACCGGCCTCTTCATCGGCCTCGGCTGCGGCGTCTCCATCGTCGCC GGCGTCATCATCCTGATGGACGGCAAGGCGGTCAAGAGCATCGAGGGCGTGCCCGTCAGCGACCGCGACCTGGAC CGGCTCGAGAAGGACCGCGAGCGCGGCATCTGGCACTTCAACAACCTCAAGGACGAGGACCCCAGCAAGAAGAAG CAGAAGAAGCAGAAGAAGAGAAAGAAGAACGAGGGCTTGGAGCTGGGCGAGTGA |
| Transcript | >Hirsu2|475 ATGCCGCCTGCTGACCGCGCCGAGCCCGTCGACGCTCCCCCCGACCGTCCGCCGCCGTCGCCGCCGCCGTCGCCA CCGCCCTCCGCCCGCCTCCTCTCCGAGCCGCCGTCCGGCGACGGCGACGACGACGCCGTGCTCGCCGTCGCCTCG GGCGCCATCGTCTCGTCCTCCAGCGGCCACGGCCTGCGTCGCACCTCCACTACCACCACCTCGGCGCCTCGACAC CGCGGCGCCCCGACTGTCGCCGCCGACCCTTCGTCGTCGCCGCACATGGCCTTGCGCCTCCACGATCTGCCGCCC GCCTCGTCGGCCGGCTCGTCCACGGTTGACATGCGCGCCGACGACGACGCGTCGCGCCCTCGCAGCCAGCAGCAG CAGCAGCAGCAGCAACACCACCAGCCCGCCTCCGCCCTCGGCACCGGCGTCCTCAAGGACGGCGCCGGCCCCGAC ACGATGCTGCAGGAGACGGCCGTGCTCGTCGCCGAGCCCGCCGCCGCCGCGCCCTTCCCCAATGGCTACCACTTC CCGCCCAAGCACTCGTTTGGCGAGTCGATGAGGCTCGGCTGCGCCGCCTTCGCCAAGTTCGTCCTGACGCCCTTC GGCTTCCTCGTCACCGTCTATGGCCTCAACATCGTCGCCTGGGGCGGCATGCTGTTCCTGCTCATCTGCAATGCC GCGCCTGCCATGTGCGTGCCGACCTGCGACGACATCAACTCGCCCAAGAAGGTGTGGGTCGAGATCGACTCCCAA ATCCTCAACGCCCTCTTCTGCGTCACCGGCTTCGGCCTGGCGCCCTGGCGCTTCCGGGACCTGTACTTCCTCATG CAGCATCGGCTCCGCGGCGACTACAAGGCCCTGAGGCGCCTCGCCGGCATCTACCGCGGATGGTTTCGCCTCGAC GGCTCCGAGGAGCTGCCCGTTCACATCGGGCCCGACAACGTGGGCCAGGCGACGGCCCGGGAGGCGCCGCGGACC GCCATTCCCTTCCCCGAACATAAGATCCCGAACGCGCCCCTCACCGGGACGCGGGCCCCGGCCAGCCGGCTCTGG AAGTTGGACCTCGTTATCTGGCTCAACGTGTGGAACACCTTCTTTCAGTGCCTGCTCGCCGGCTTCATGTGGGGC ATGAACCGCTTCAATCGGCCGGGCTGGGCCACCGGCCTCTTCATCGGCCTCGGCTGCGGCGTCTCCATCGTCGCC GGCGTCATCATCCTGATGGACGGCAAGGCGGTCAAGAGCATCGAGGGCGTGCCCGTCAGCGACCGCGACCTGGAC CGGCTCGAGAAGGACCGCGAGCGCGGCATCTGGCACTTCAACAACCTCAAGGACGAGGACCCCAGCAAGAAGAAG CAGAAGAAGCAGAAGAAGAGAAAGAAGAACGAGGGCTTGGAGCTGGGCGAGTGA |
| Gene | >Hirsu2|475 ATGCCGCCTGCTGACCGCGCCGAGCCCGTCGACGCTCCCCCCGACCGTCCGCCGCCGTCGCCGCCGCCGTCGCCA CCGCCCTCCGCCCGCCTCCTCTCCGAGCCGCCGTCCGGCGACGGCGACGACGACGCCGTGCTCGCCGTCGCCTCG GGCGCCATCGTCTCGTCCTCCAGCGGCCACGGCCTGCGTCGCACCTCCACTACCACCACCTCGGCGCCTCGACAC CGCGGCGCCCCGACTGTCGCCGCCGACCCTTCGTCGTCGCCGCACATGGCCTTGCGCCTCCACGATCTGCCGCCC GCCTCGTCGGCCGGCTCGTCCACGGTTGACATGCGCGCCGACGACGACGCGTCGCGCCCTCGCAGCCAGCAGCAG CAGCAGCAGCAGCAACACCACCAGCCCGCCTCCGCCCTCGGCACCGGCGTCCTCAAGGACGGCGCCGGCCCCGAC ACGATGCTGCAGGAGACGGCCGTGCTCGTCGCCGAGCCCGCCGCCGCCGCGCCCTTCCCCAATGGCTACCACTTC CCGCCCAAGCACTCGTTTGGCGAGTCGATGAGGCTCGGCTGCGCCGCCTTCGCCAAGTTCGTCCTGACGCCCTTC GGCTTCCTCGTCACCGTCTATGGCCTCAACATCGTCGCCTGGGGCGGCATGCTGTTCCTGCTCATCTGCAATGCC GGTCGGTCGTCCCCCCTTGCCCTGAGTCTCGCTGCTGGCCGAAAAGACGTCGTGCTGACTTTCTCTTTTTTCAGC GCCTGCCATGTGCGTGCCGACCTGCGACGACATCAACTCGCCCAAGAAGGTGTGGGTCGAGATCGACTCCCAAAT CCTCAACGCCCTCTTCTGCGTCACCGGCTTCGGCCTGGCGCCCTGGCGCTTCCGGGACCTGTACTTCCTCATGCA GCATCGGCTCCGCGGCGACTACAAGGCCCTGAGGCGCCTCGCCGGCATCTACCGCGGATGGTTTCGCCTCGACGG CTCCGAGGAGCTGCCCGTTCACATCGGGCCCGACAACGTGGGCCAGGCGACGGCCCGGGAGGCGCCGCGGACCGC CATTCCCTTCCCCGAACATAAGATCCCGAACGCGCCCCTCACCGGGACGCGGGCCCCGGCCAGCCGGCTCTGGAA GTTGGACCTCGTTATCTGGCTCAACGTGTGGAACACCTTCTTTCAGTGCCTGCTCGCCGGCTTCATGTGGGGCAT GAACCGCTTCAATCGGCCGGGCTGGGCCACCGGCCTCTTCATCGGCCTCGGCTGCGGCGTCTCCATCGTCGCCGG CGTCATCATCCTGATGGACGGCAAGGCGGTCAAGAGCATCGAGGGCGTGCCCGTCAGCGACCGCGACCTGGACCG GCTCGAGAAGGACCGCGAGCGCGGCATCTGGCACTTCAACAACCTCAAGGACGAGGACCCCAGCAAGAAGAAGCA GAAGAAGCAGAAGAAGAGAAAGAAGAACGAGGGCTTGGAGCTGGGCGAGTGA |