Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4718
Gene name
LocationContig_239:10806..12000
Strand+
Gene length (bp)1194
Transcript length (bp)1068
Coding sequence length (bp)1068
Protein length (aa) 356

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09451 ATG27 Autophagy-related protein 27 1.5E-92 16 351

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|D4B086|ATG27_ARTBC Autophagy-related protein 27 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_01857 PE=1 SV=1 6 339 7.0E-25
sp|Q6CBS9|ATG27_YARLI Autophagy-related protein 27 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=ATG27 PE=3 SV=1 245 355 5.0E-23
sp|A7KAK7|ATG27_PICAN Autophagy-related protein 27 OS=Pichia angusta GN=ATG27 PE=3 SV=1 240 355 8.0E-11

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Endoplasmic reticulum Signal peptide|Transmembrane domain 0.1414 0.077 0.1128 0.2796 0.1555 0.0128 0.5844 0.5156 0.5151 0.0285

SignalP

SignalP signal predicted Location Score
Yes 1 - 24 0.999695

Transmembrane Domains

Domain # Start End Length
1 284 306 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2857
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|5976
Ophiocordyceps australis map64 (Brazil) OphauB2|1520
Ophiocordyceps camponoti-floridani Ophcf2|03681
Ophiocordyceps camponoti-rufipedis Ophun1|4227
Ophiocordyceps kimflemingae Ophio5|6080
Ophiocordyceps subramaniannii Hirsu2|4718 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4718
MYPPQLSSVAVAVAVALAPLRTSAMLRCENVRVDGHSYDLSQLSGPRSVVTSLYESIPDVYHNTTYTVDICKPLK
KSGKAKKTEECPNGTRVCAIKRFLQGQTNAVEQVVAIAGSLENAGGSQFDYDAVRLKTSDSNSDSQKEGLRLVLK
GGKHPLDGPVAERREQRAVIEFLCDHNKKGDEGEWEAEDKYDKEGGPQRRADDKGGDGKDDGGNGTSAIEHQLRK
PDAALIWESYEREKDADVLRLTWHTKFACETQSGGGGGGGDGGDGGNKGDGNSSRHWGFFTWFVLVLFLGIAAYL
IFGSWLNYNRYGARGWDLVPHGDMIRDVPYLMKDWVRRVLNTVQGTGSRGGYSAV*
Coding >Hirsu2|4718
ATGTATCCGCCTCAATTATCAAGCGTCGCCGTCGCCGTCGCCGTCGCCCTCGCGCCGCTGCGGACGTCGGCGATG
CTGCGATGCGAGAACGTGCGAGTCGACGGCCACAGCTACGACCTCTCCCAGCTGTCGGGCCCGCGGTCCGTCGTG
ACGTCTCTGTACGAGTCGATCCCCGACGTGTACCACAACACGACCTACACCGTGGACATCTGCAAGCCGCTGAAG
AAGAGCGGCAAGGCGAAGAAGACGGAGGAGTGTCCCAACGGGACCCGAGTCTGTGCCATCAAGCGCTTCCTCCAG
GGCCAGACGAACGCAGTCGAGCAGGTGGTGGCCATCGCCGGATCTCTGGAGAACGCGGGCGGGTCGCAATTCGAC
TACGATGCCGTGCGGTTGAAGACGAGCGACTCCAACAGCGACTCCCAGAAGGAGGGCTTGAGGCTCGTGCTCAAG
GGCGGCAAGCACCCCCTGGACGGCCCGGTCGCCGAGCGACGCGAGCAGAGGGCCGTCATCGAGTTTCTCTGCGAT
CACAACAAGAAGGGTGACGAGGGCGAGTGGGAGGCCGAGGACAAGTACGACAAGGAGGGCGGGCCGCAGCGGCGA
GCCGACGACAAGGGGGGCGACGGCAAGGACGACGGCGGCAACGGCACGTCCGCCATCGAACATCAGCTCCGGAAG
CCCGACGCGGCTCTCATATGGGAGAGCTACGAGCGGGAGAAGGATGCCGACGTGCTGCGCCTGACCTGGCACACC
AAGTTCGCCTGCGAGACGCAGAGCGGCGGCGGCGGCGGCGGCGGCGACGGCGGCGACGGCGGCAACAAGGGCGAC
GGCAACAGCAGCCGCCACTGGGGCTTCTTCACCTGGTTTGTCCTTGTCCTCTTCCTCGGCATCGCCGCCTACCTC
ATCTTCGGCTCTTGGCTCAACTATAACCGGTACGGAGCTAGAGGCTGGGACCTGGTTCCGCACGGCGACATGATC
CGCGACGTCCCCTACCTGATGAAAGACTGGGTGAGAAGGGTGCTCAACACCGTCCAAGGAACGGGCAGCAGGGGA
GGGTACAGCGCAGTCTAA
Transcript >Hirsu2|4718
ATGTATCCGCCTCAATTATCAAGCGTCGCCGTCGCCGTCGCCGTCGCCCTCGCGCCGCTGCGGACGTCGGCGATG
CTGCGATGCGAGAACGTGCGAGTCGACGGCCACAGCTACGACCTCTCCCAGCTGTCGGGCCCGCGGTCCGTCGTG
ACGTCTCTGTACGAGTCGATCCCCGACGTGTACCACAACACGACCTACACCGTGGACATCTGCAAGCCGCTGAAG
AAGAGCGGCAAGGCGAAGAAGACGGAGGAGTGTCCCAACGGGACCCGAGTCTGTGCCATCAAGCGCTTCCTCCAG
GGCCAGACGAACGCAGTCGAGCAGGTGGTGGCCATCGCCGGATCTCTGGAGAACGCGGGCGGGTCGCAATTCGAC
TACGATGCCGTGCGGTTGAAGACGAGCGACTCCAACAGCGACTCCCAGAAGGAGGGCTTGAGGCTCGTGCTCAAG
GGCGGCAAGCACCCCCTGGACGGCCCGGTCGCCGAGCGACGCGAGCAGAGGGCCGTCATCGAGTTTCTCTGCGAT
CACAACAAGAAGGGTGACGAGGGCGAGTGGGAGGCCGAGGACAAGTACGACAAGGAGGGCGGGCCGCAGCGGCGA
GCCGACGACAAGGGGGGCGACGGCAAGGACGACGGCGGCAACGGCACGTCCGCCATCGAACATCAGCTCCGGAAG
CCCGACGCGGCTCTCATATGGGAGAGCTACGAGCGGGAGAAGGATGCCGACGTGCTGCGCCTGACCTGGCACACC
AAGTTCGCCTGCGAGACGCAGAGCGGCGGCGGCGGCGGCGGCGGCGACGGCGGCGACGGCGGCAACAAGGGCGAC
GGCAACAGCAGCCGCCACTGGGGCTTCTTCACCTGGTTTGTCCTTGTCCTCTTCCTCGGCATCGCCGCCTACCTC
ATCTTCGGCTCTTGGCTCAACTATAACCGGTACGGAGCTAGAGGCTGGGACCTGGTTCCGCACGGCGACATGATC
CGCGACGTCCCCTACCTGATGAAAGACTGGGTGAGAAGGGTGCTCAACACCGTCCAAGGAACGGGCAGCAGGGGA
GGGTACAGCGCAGTCTAA
Gene >Hirsu2|4718
ATGTATCCGCCTCAATTATCAAGCGTCGCCGTCGCCGTCGCCGTCGCCCTCGCGCCGCTGCGGACGTCGGCGATG
CTGCGATGCGAGAACGTGCGAGTCGACGGCCACAGCTACGACCTCTCCCAGCTGTCGGGCCCGCGGTCCGTCGTG
ACGTCTCTGTACGAGTCGATCCCCGACGTGTACCACAACACGACCTACACCGTGGACATCTGCAAGCCGCTGAAG
AAGAGCGGCAAGGCGAAGAAGACGGAGGAGTGTCCCAACGGGACCCGAGGTGAGCCTCCTCCGCCTCCTCGTCCG
GGCGCGCGCTGACGCCGTGCGTCAACCAGTCTGTGCCATCAAGCGCTTCCTCCAGGGCCAGACGAACGCAGTCGA
GCAGGTGGTGGCCATCGCCGGATCTCTGGAGAACGCGGGCGGGTCGCAATTCGACTACGATGCCGTGCGGTTGAA
GACGAGCGACTCCAACAGCGACTCCCAGAAGGAGGGCTTGAGGCTCGTGCTCAAGGGCGGCAAGCACCCCCTGGA
CGGCCCGGTCGCCGAGCGACGCGAGCAGAGGGCCGTCATCGAGTTTCTCTGCGATCACAACAAGAAGGGTGACGA
GGGCGAGTGGGAGGCCGAGGACAAGTACGACAAGGAGGGCGGGCCGCAGCGGCGAGCCGACGACAAGGGGGGCGA
CGGCAAGGACGACGGCGGCAACGGCACGTCCGCCATCGAACATCAGCTCCGGAAGCCCGACGCGGCTCTCATATG
GGAGAGCTACGAGCGGGAGAAGGATGCCGACGTGCTGCGCCTGACCTGGCACACCAAGTTCGCCTGCGAGACGCA
GAGCGGCGGCGGCGGCGGCGGCGGCGACGGCGGCGACGGCGGCAACAAGGGCGACGGCAACAGCAGCCGCCACTG
GGGCTTCTTCACCTGGTTTGTCCTTGTGTACGCTCGCGCCCGCCCTGTCCCTGGCCAAGGGTTGTGTCGAGGGCT
GTGCTGACTTGTGCTTCCCGCAGCCTCTTCCTCGGCATCGCCGCCTACCTCATCTTCGGCTCTTGGCTCAACTAT
AACCGGTACGGAGCTAGAGGCTGGGACCTGGTTCCGCACGGCGACATGATCCGCGACGTCCCCTACCTGATGAAA
GACTGGGTGAGAAGGGTGCTCAACACCGTCCAAGGAACGGGCAGCAGGGGAGGGTACAGCGCAGTCTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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