Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4715
Gene name
LocationContig_239:4165..5503
Strand+
Gene length (bp)1338
Transcript length (bp)1161
Coding sequence length (bp)1161
Protein length (aa) 387

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 37 0.5

Transmembrane Domains

Domain # Start End Length
1 21 40 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4715
MSPPYDRYDRGSSRRGVWTHWVPLAVSLTVATAGLAAWIWSQRREEDSDHVDADLDYEDTGYGGDPAHGGATARD
AARSMVKPAQDDDQSHGQAPAPGEVSGSGWGARMSGALRRTPSPQQFLDSTGKTVAAGVAAAGAVVGKALASIRE
EDKAYSENPWSEEADAKKDRAPATWSKGRKAVAVVVSADARVPLDGTGDSHEVASILSHIPRHNDLSAIKLYVLI
YAPDLKETALETITMQSPGEDSKNPSAAVPSGNATFKAIYSQALGLVDKETMIIPFTTPTGHVHVLRHIQPEIVY
LQESLSGENGSIITNLQTWLRHDVVLVVGAESGSGGLADSESEAEKSGQGEKWWQKPERVGRGRGIVVVDGMRVH
DDWMRRVQGRE*
Coding >Hirsu2|4715
ATGTCGCCGCCCTACGACCGATACGACCGCGGGTCGTCGCGACGAGGCGTGTGGACGCATTGGGTGCCACTCGCC
GTCTCGCTCACCGTCGCCACCGCCGGCCTCGCCGCCTGGATATGGAGTCAGCGGCGGGAAGAAGACAGTGACCAC
GTTGATGCCGACTTGGACTACGAAGATACGGGCTACGGCGGTGATCCGGCCCATGGTGGGGCCACGGCGCGGGAT
GCGGCCCGGTCCATGGTGAAGCCTGCGCAGGACGATGATCAAAGCCACGGGCAGGCTCCGGCGCCCGGCGAGGTG
TCTGGCTCCGGCTGGGGAGCCAGGATGTCTGGGGCGCTGCGCCGTACGCCGAGCCCTCAGCAGTTCCTCGACTCG
ACGGGCAAGACGGTCGCTGCCGGCGTGGCTGCTGCCGGCGCAGTAGTCGGCAAGGCGTTGGCCTCGATCCGCGAA
GAGGACAAGGCTTACTCGGAAAACCCGTGGTCCGAGGAGGCAGATGCGAAGAAGGACCGGGCCCCTGCGACATGG
AGCAAGGGGCGCAAAGCCGTCGCGGTTGTTGTGTCTGCCGACGCTCGAGTCCCTCTCGACGGCACCGGTGACTCC
CACGAGGTCGCTTCGATCTTGTCGCACATCCCGCGCCACAACGACTTATCTGCCATTAAACTCTACGTATTGATC
TATGCACCGGACTTGAAGGAGACCGCGCTGGAAACCATTACCATGCAAAGTCCTGGCGAGGACTCGAAAAACCCA
AGCGCGGCCGTCCCTAGTGGCAACGCAACCTTCAAAGCCATATACTCGCAAGCGCTCGGCCTTGTCGACAAAGAG
ACCATGATCATCCCCTTCACCACGCCGACCGGCCACGTCCACGTCCTGCGACACATCCAGCCAGAGATCGTATAC
CTCCAGGAGTCACTGAGTGGCGAAAATGGAAGCATCATCACAAACCTTCAGACGTGGCTGCGTCACGACGTCGTT
CTCGTGGTCGGGGCCGAGAGCGGCTCTGGCGGCCTCGCCGACAGTGAATCAGAGGCAGAGAAAAGCGGGCAGGGC
GAAAAGTGGTGGCAAAAGCCTGAAAGGGTCGGCCGCGGCCGTGGCATCGTGGTGGTGGATGGGATGCGTGTGCAT
GACGACTGGATGCGCCGCGTGCAGGGCCGAGAATGA
Transcript >Hirsu2|4715
ATGTCGCCGCCCTACGACCGATACGACCGCGGGTCGTCGCGACGAGGCGTGTGGACGCATTGGGTGCCACTCGCC
GTCTCGCTCACCGTCGCCACCGCCGGCCTCGCCGCCTGGATATGGAGTCAGCGGCGGGAAGAAGACAGTGACCAC
GTTGATGCCGACTTGGACTACGAAGATACGGGCTACGGCGGTGATCCGGCCCATGGTGGGGCCACGGCGCGGGAT
GCGGCCCGGTCCATGGTGAAGCCTGCGCAGGACGATGATCAAAGCCACGGGCAGGCTCCGGCGCCCGGCGAGGTG
TCTGGCTCCGGCTGGGGAGCCAGGATGTCTGGGGCGCTGCGCCGTACGCCGAGCCCTCAGCAGTTCCTCGACTCG
ACGGGCAAGACGGTCGCTGCCGGCGTGGCTGCTGCCGGCGCAGTAGTCGGCAAGGCGTTGGCCTCGATCCGCGAA
GAGGACAAGGCTTACTCGGAAAACCCGTGGTCCGAGGAGGCAGATGCGAAGAAGGACCGGGCCCCTGCGACATGG
AGCAAGGGGCGCAAAGCCGTCGCGGTTGTTGTGTCTGCCGACGCTCGAGTCCCTCTCGACGGCACCGGTGACTCC
CACGAGGTCGCTTCGATCTTGTCGCACATCCCGCGCCACAACGACTTATCTGCCATTAAACTCTACGTATTGATC
TATGCACCGGACTTGAAGGAGACCGCGCTGGAAACCATTACCATGCAAAGTCCTGGCGAGGACTCGAAAAACCCA
AGCGCGGCCGTCCCTAGTGGCAACGCAACCTTCAAAGCCATATACTCGCAAGCGCTCGGCCTTGTCGACAAAGAG
ACCATGATCATCCCCTTCACCACGCCGACCGGCCACGTCCACGTCCTGCGACACATCCAGCCAGAGATCGTATAC
CTCCAGGAGTCACTGAGTGGCGAAAATGGAAGCATCATCACAAACCTTCAGACGTGGCTGCGTCACGACGTCGTT
CTCGTGGTCGGGGCCGAGAGCGGCTCTGGCGGCCTCGCCGACAGTGAATCAGAGGCAGAGAAAAGCGGGCAGGGC
GAAAAGTGGTGGCAAAAGCCTGAAAGGGTCGGCCGCGGCCGTGGCATCGTGGTGGTGGATGGGATGCGTGTGCAT
GACGACTGGATGCGCCGCGTGCAGGGCCGAGAATGA
Gene >Hirsu2|4715
ATGTCGCCGCCCTACGACCGATACGACCGCGGGTCGTCGCGACGAGGCGTGTGGACGCATTGGGTGCCACTCGCC
GTCTCGCTCACCGTCGCCACCGCCGGCCTCGCCGCCTGGATATGGAGTCAGCGGCGGGAAGAAGACAGTGACCAC
GTTGATGCCGACTTGGACTACGAAGATACGGGCTACGGCGGTGATCCGGCCCATGGTGGGGCCACGGCGCGGGAT
GCGGCCCGGTCCATGGTGAAGCCTGCGCAGGACGATGATCAAAGCCACGGGCAGGCTCCGGCGCCCGGCGAGGTG
TCTGGCTCCGGCTGGGGAGCCAGGATGTCTGGGGCGCTGCGCCGTACGCCGAGCCCTCAGCAGTTCCTCGACTCG
ACGGGCAAGACGGTCGCTGCCGGCGTGGCTGCTGCCGGCGCAGTAGTCGGCAAGGCGTTGGCCTCGATCCGCGAA
GAGGACAAGGCTTACTCGGAAAACCCGTGGTCCGAGGAGGCAGATGCGAAGAAGGACCGGGCCCCTGCGACATGG
AGCAAGGGGCGCAAAGCCGTCGCGGTTGTTGTGTCTGCCGACGCTCGAGTCCCTCTCGACGGCACCGGTGACTCC
CACGAGGTCGCTGTACGTGACGATACCGGCCCCTTCGATCCTTCCGTTTCTCCCGTCACTGACGAGATGGACAGT
CGATCTTGTCGCACATCCCGCGCCACAACGACTTATCTGCCATTAAACTCTACGTATTGATCTATGCACCGGACT
TGAAGGAGACCGCGCTGGAAACCATTACCAGTAACCTTCCGCCTGCTTCGCTGAGTTCGTCATTTTCTAACATTG
GACACGATCAAGTGCAAAGTCCTGGCGAGGACTCGAAAAACCCAAGGTAAGAGGAGCCCCCCCCCCCCCTCAGGA
GTGTAGGCTTGTGGCGCTGACCATGCCAGCGCGGCCGTCCCTAGTGGCAACGCAACCTTCAAAGCCATATACTCG
CAAGCGCTCGGCCTTGTCGACAAAGAGACCATGATCATCCCCTTCACCACGCCGACCGGCCACGTCCACGTCCTG
CGACACATCCAGCCAGAGATCGTATACCTCCAGGAGTCACTGAGTGGCGAAAATGGAAGCATCATCACAAACCTT
CAGACGTGGCTGCGTCACGACGTCGTTCTCGTGGTCGGGGCCGAGAGCGGCTCTGGCGGCCTCGCCGACAGTGAA
TCAGAGGCAGAGAAAAGCGGGCAGGGCGAAAAGTGGTGGCAAAAGCCTGAAAGGGTCGGCCGCGGCCGTGGCATC
GTGGTGGTGGATGGGATGCGTGTGCATGACGACTGGATGCGCCGCGTGCAGGGCCGAGAATGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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