Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4702
Gene name
LocationContig_238:18970..20225
Strand+
Gene length (bp)1255
Transcript length (bp)1197
Coding sequence length (bp)1197
Protein length (aa) 399

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01755 Glyco_transf_25 Glycosyltransferase family 25 (LPS biosynthesis protein) 3.5E-10 128 304

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 21 0.5

Transmembrane Domains

Domain # Start End Length
1 13 32 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4702
MIATMTHWLASQRLRPSVVAVGLLVCLATWFLFENLSVQHVGGTYGLSFPLSGRPQSRFSKTSTAGNSTVGFHSV
NFINLPSRYDRLDAMSLQAYLSGVEIVEEPGVEADQIHDVGMPPTNQPDIKVKEKACWRAHANIWSRMLRSSIPA
ILILESDANWDIHFREIMENLNEHFIQFLQQQADSAPSASTATDGDNSTATREDAPRRPVAHSADDPWQSSHWDI
LSIGQCTDNELHKDEKLIYHDPFVVPGEDYYGQKLGEERVIRKSGGIVCTTAYAVSRQGAAKLLLRSSINLDGPV
DLLMGQMIKDGDLQAYSITPVIVGQWGYLPDIGMDNRGANSDINDNGEPIDEHTKMNGWDGVWKSKTVWKVKTPF
PQLKYMTLEEAWKRIVGSSKASS*
Coding >Hirsu2|4702
ATGATTGCGACCATGACGCACTGGCTGGCTTCACAACGCTTGCGACCTTCAGTTGTCGCCGTGGGTCTGCTTGTC
TGTCTCGCGACCTGGTTCCTTTTCGAAAACTTGTCTGTTCAGCATGTGGGCGGCACGTACGGCCTGTCGTTCCCA
CTATCGGGGCGTCCGCAGTCCCGCTTCTCGAAGACTTCGACCGCGGGCAACAGCACCGTCGGCTTTCATTCCGTC
AACTTCATCAACCTACCCAGCCGCTACGATCGCCTCGACGCCATGTCGTTGCAGGCCTATCTCTCGGGAGTCGAA
ATCGTTGAAGAGCCCGGCGTCGAGGCGGACCAAATCCACGACGTTGGCATGCCTCCTACCAACCAGCCAGACATC
AAAGTAAAGGAGAAGGCATGCTGGCGTGCGCATGCGAACATCTGGTCCAGGATGCTGAGGAGCTCGATTCCCGCC
ATTCTCATCCTCGAATCGGACGCGAATTGGGACATTCACTTCCGCGAAATCATGGAAAATCTGAATGAGCACTTC
ATACAATTCCTGCAGCAGCAGGCCGACTCAGCACCGAGCGCATCTACCGCCACAGACGGCGACAACAGCACGGCG
ACACGAGAGGACGCGCCGAGGCGGCCGGTAGCCCACAGCGCGGACGACCCATGGCAGAGCAGCCACTGGGATATT
CTCTCTATCGGCCAATGCACAGACAACGAGCTCCACAAGGACGAGAAACTTATATACCACGACCCCTTCGTCGTG
CCCGGCGAAGATTACTACGGCCAGAAACTGGGCGAGGAGAGGGTGATACGAAAATCCGGCGGCATCGTTTGCACC
ACGGCCTATGCCGTCAGTCGACAAGGGGCAGCCAAACTACTGCTCAGGTCTTCGATCAACCTTGATGGCCCAGTC
GATCTGCTCATGGGGCAGATGATCAAAGATGGCGATCTGCAGGCGTACAGCATCACACCCGTCATTGTAGGTCAG
TGGGGGTATTTACCAGATATCGGGATGGACAACCGCGGCGCCAACAGTGACATCAACGACAACGGTGAGCCGATT
GACGAGCACACAAAGATGAATGGCTGGGACGGGGTGTGGAAGTCCAAAACGGTATGGAAAGTCAAGACACCCTTT
CCTCAGCTCAAGTATATGACATTGGAGGAGGCATGGAAACGCATAGTTGGCTCTTCGAAGGCTTCAAGTTAG
Transcript >Hirsu2|4702
ATGATTGCGACCATGACGCACTGGCTGGCTTCACAACGCTTGCGACCTTCAGTTGTCGCCGTGGGTCTGCTTGTC
TGTCTCGCGACCTGGTTCCTTTTCGAAAACTTGTCTGTTCAGCATGTGGGCGGCACGTACGGCCTGTCGTTCCCA
CTATCGGGGCGTCCGCAGTCCCGCTTCTCGAAGACTTCGACCGCGGGCAACAGCACCGTCGGCTTTCATTCCGTC
AACTTCATCAACCTACCCAGCCGCTACGATCGCCTCGACGCCATGTCGTTGCAGGCCTATCTCTCGGGAGTCGAA
ATCGTTGAAGAGCCCGGCGTCGAGGCGGACCAAATCCACGACGTTGGCATGCCTCCTACCAACCAGCCAGACATC
AAAGTAAAGGAGAAGGCATGCTGGCGTGCGCATGCGAACATCTGGTCCAGGATGCTGAGGAGCTCGATTCCCGCC
ATTCTCATCCTCGAATCGGACGCGAATTGGGACATTCACTTCCGCGAAATCATGGAAAATCTGAATGAGCACTTC
ATACAATTCCTGCAGCAGCAGGCCGACTCAGCACCGAGCGCATCTACCGCCACAGACGGCGACAACAGCACGGCG
ACACGAGAGGACGCGCCGAGGCGGCCGGTAGCCCACAGCGCGGACGACCCATGGCAGAGCAGCCACTGGGATATT
CTCTCTATCGGCCAATGCACAGACAACGAGCTCCACAAGGACGAGAAACTTATATACCACGACCCCTTCGTCGTG
CCCGGCGAAGATTACTACGGCCAGAAACTGGGCGAGGAGAGGGTGATACGAAAATCCGGCGGCATCGTTTGCACC
ACGGCCTATGCCGTCAGTCGACAAGGGGCAGCCAAACTACTGCTCAGGTCTTCGATCAACCTTGATGGCCCAGTC
GATCTGCTCATGGGGCAGATGATCAAAGATGGCGATCTGCAGGCGTACAGCATCACACCCGTCATTGTAGGTCAG
TGGGGGTATTTACCAGATATCGGGATGGACAACCGCGGCGCCAACAGTGACATCAACGACAACGGTGAGCCGATT
GACGAGCACACAAAGATGAATGGCTGGGACGGGGTGTGGAAGTCCAAAACGGTATGGAAAGTCAAGACACCCTTT
CCTCAGCTCAAGTATATGACATTGGAGGAGGCATGGAAACGCATAGTTGGCTCTTCGAAGGCTTCAAGTTAG
Gene >Hirsu2|4702
ATGATTGCGACCATGACGCACTGGCTGGCTTCACAACGCTTGCGACCTTCAGTTGTCGCCGTGGGTCTGCTTGTC
TGTCTCGCGACCTGGTTCCTTTTCGAAAACTTGTCTGTTCAGCATGTGGGCGGCACGTACGGCCTGTCGTTCCCA
CTATCGGGGCGTCCGCAGTCCCGCTTCTCGAAGACTTCGACCGCGGGCAACAGCACCGTCGGCTTTCATTCCGTC
AACTTCATCAACCTACCCAGCCGCTACGATCGCCTCGACGCCATGTCGTTGCAGGCCTATCTCTCGGGAGTCGAA
ATCGTTGAAGAGCCCGGCGTCGAGGCGGACCAAATCCACGACGTTGGCATGCCTCCTACCAACCAGCCAGACATC
AAAGTAAAGGAGAAGGCATGCTGGCGTGCGCATGCGAACGTAAGTCCTTACCGGAGAGCGCTTGAATTAGGCACG
TTCATAACTAAGCGGCTGGCAGATCTGGTCCAGGATGCTGAGGAGCTCGATTCCCGCCATTCTCATCCTCGAATC
GGACGCGAATTGGGACATTCACTTCCGCGAAATCATGGAAAATCTGAATGAGCACTTCATACAATTCCTGCAGCA
GCAGGCCGACTCAGCACCGAGCGCATCTACCGCCACAGACGGCGACAACAGCACGGCGACACGAGAGGACGCGCC
GAGGCGGCCGGTAGCCCACAGCGCGGACGACCCATGGCAGAGCAGCCACTGGGATATTCTCTCTATCGGCCAATG
CACAGACAACGAGCTCCACAAGGACGAGAAACTTATATACCACGACCCCTTCGTCGTGCCCGGCGAAGATTACTA
CGGCCAGAAACTGGGCGAGGAGAGGGTGATACGAAAATCCGGCGGCATCGTTTGCACCACGGCCTATGCCGTCAG
TCGACAAGGGGCAGCCAAACTACTGCTCAGGTCTTCGATCAACCTTGATGGCCCAGTCGATCTGCTCATGGGGCA
GATGATCAAAGATGGCGATCTGCAGGCGTACAGCATCACACCCGTCATTGTAGGTCAGTGGGGGTATTTACCAGA
TATCGGGATGGACAACCGCGGCGCCAACAGTGACATCAACGACAACGGTGAGCCGATTGACGAGCACACAAAGAT
GAATGGCTGGGACGGGGTGTGGAAGTCCAAAACGGTATGGAAAGTCAAGACACCCTTTCCTCAGCTCAAGTATAT
GACATTGGAGGAGGCATGGAAACGCATAGTTGGCTCTTCGAAGGCTTCAAGTTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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