© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|4697 |
| Gene name | |
| Location | Contig_238:59..539 |
| Strand | + |
| Gene length (bp) | 480 |
| Transcript length (bp) | 480 |
| Coding sequence length (bp) | 480 |
| Protein length (aa) | 160 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00583 | Acetyltransf_1 | Acetyltransferase (GNAT) family | 3.5E-10 | 43 | 131 |
| PF13673 | Acetyltransf_10 | Acetyltransferase (GNAT) domain | 1.2E-05 | 39 | 141 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q18B70|ATSE_PEPD6 | Acetyltransferase CD1211 OS=Peptoclostridium difficile (strain 630) GN=CD630_12110 PE=3 SV=1 | 1 | 157 | 3.0E-27 |
| sp|O94340|YHM7_SCHPO | Uncharacterized N-acetyltransferase C1271.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1271.07c PE=3 SV=1 | 18 | 153 | 7.0E-24 |
| sp|Q54GF2|Y0199_DICDI | Uncharacterized N-acetyltransferase DDB_G0290199 OS=Dictyostelium discoideum GN=DDB_G0290199 PE=3 SV=1 | 78 | 146 | 1.0E-16 |
| sp|Q8CHQ9|CMLO2_MOUSE | Probable N-acetyltransferase CML2 OS=Mus musculus GN=Cml2 PE=1 SV=1 | 14 | 142 | 3.0E-09 |
| sp|Q9JIY7|NAT8_MOUSE | N-acetyltransferase 8 OS=Mus musculus GN=Nat8 PE=1 SV=1 | 21 | 139 | 8.0E-09 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q18B70|ATSE_PEPD6 | Acetyltransferase CD1211 OS=Peptoclostridium difficile (strain 630) GN=CD630_12110 PE=3 SV=1 | 1 | 157 | 3.0E-27 |
| sp|O94340|YHM7_SCHPO | Uncharacterized N-acetyltransferase C1271.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1271.07c PE=3 SV=1 | 18 | 153 | 7.0E-24 |
| sp|Q54GF2|Y0199_DICDI | Uncharacterized N-acetyltransferase DDB_G0290199 OS=Dictyostelium discoideum GN=DDB_G0290199 PE=3 SV=1 | 78 | 146 | 1.0E-16 |
| sp|Q8CHQ9|CMLO2_MOUSE | Probable N-acetyltransferase CML2 OS=Mus musculus GN=Cml2 PE=1 SV=1 | 14 | 142 | 3.0E-09 |
| sp|Q9JIY7|NAT8_MOUSE | N-acetyltransferase 8 OS=Mus musculus GN=Nat8 PE=1 SV=1 | 21 | 139 | 8.0E-09 |
| sp|Q54GF2|Y0199_DICDI | Uncharacterized N-acetyltransferase DDB_G0290199 OS=Dictyostelium discoideum GN=DDB_G0290199 PE=3 SV=1 | 4 | 60 | 3.0E-08 |
| sp|P85118|CMLO2_RAT | Probable N-acetyltransferase CML2 OS=Rattus norvegicus GN=Cml2 PE=3 SV=1 | 19 | 142 | 3.0E-08 |
| sp|Q9QXT3|NAT8_RAT | N-acetyltransferase 8 OS=Rattus norvegicus GN=Nat8 PE=1 SV=1 | 21 | 139 | 5.0E-08 |
| sp|Q9JIZ0|CMLO1_MOUSE | Probable N-acetyltransferase CML1 OS=Mus musculus GN=Cml1 PE=1 SV=1 | 41 | 136 | 6.0E-08 |
| sp|Q9QXS7|CMLO5_RAT | Probable N-acetyltransferase CML5 OS=Rattus norvegicus GN=Cml5 PE=2 SV=2 | 21 | 154 | 1.0E-07 |
| sp|E0CYC6|NAT8B_MOUSE | N-acetyltransferase 8B OS=Mus musculus GN=Nat8b PE=1 SV=1 | 41 | 142 | 1.0E-07 |
| sp|Q9QXT4|CMLO1_RAT | Probable N-acetyltransferase CML1 OS=Rattus norvegicus GN=Cml1 PE=2 SV=1 | 39 | 139 | 3.0E-07 |
| sp|Q9JIY6|CMLO6_RAT | Probable N-acetyltransferase CML6 OS=Rattus norvegicus GN=Cml6 PE=2 SV=1 | 21 | 142 | 2.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.5 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|4697 MAAVRACFGAYTAWLDEDISFQNYAAELGGLPGQYAAAAGGALLLAVNAGGQILGCVAMRPLTVGPRYAAGRRAG GARVCEMKRLFVYPEARGRRVSRALVRELVRTAREAGYDEMVLDTMARMRAAIGLYASEAFVPTEPYCFNPLDGV LFFSKRLDA* |
| Coding | >Hirsu2|4697 ATGGCCGCCGTCCGCGCATGCTTCGGCGCCTACACGGCCTGGCTGGACGAGGACATCTCCTTCCAGAACTACGCG GCCGAGCTGGGCGGGCTACCGGGCCAGTACGCGGCCGCGGCTGGCGGCGCCCTGCTGCTGGCCGTCAACGCCGGC GGCCAGATCCTGGGCTGCGTCGCCATGCGCCCGCTGACGGTCGGGCCCCGGTACGCGGCCGGGCGGCGCGCGGGC GGCGCGCGCGTGTGCGAGATGAAACGCCTGTTCGTCTACCCCGAGGCCCGCGGCCGGCGGGTCTCGAGGGCTCTG GTCCGGGAGCTGGTCCGGACGGCGCGCGAGGCCGGCTACGACGAGATGGTCCTCGACACCATGGCCCGGATGCGC GCGGCCATCGGGCTGTACGCGTCGGAGGCGTTTGTGCCGACCGAGCCGTACTGCTTCAACCCGCTCGACGGCGTT CTCTTCTTCTCCAAAAGGCTAGATGCCTAG |
| Transcript | >Hirsu2|4697 ATGGCCGCCGTCCGCGCATGCTTCGGCGCCTACACGGCCTGGCTGGACGAGGACATCTCCTTCCAGAACTACGCG GCCGAGCTGGGCGGGCTACCGGGCCAGTACGCGGCCGCGGCTGGCGGCGCCCTGCTGCTGGCCGTCAACGCCGGC GGCCAGATCCTGGGCTGCGTCGCCATGCGCCCGCTGACGGTCGGGCCCCGGTACGCGGCCGGGCGGCGCGCGGGC GGCGCGCGCGTGTGCGAGATGAAACGCCTGTTCGTCTACCCCGAGGCCCGCGGCCGGCGGGTCTCGAGGGCTCTG GTCCGGGAGCTGGTCCGGACGGCGCGCGAGGCCGGCTACGACGAGATGGTCCTCGACACCATGGCCCGGATGCGC GCGGCCATCGGGCTGTACGCGTCGGAGGCGTTTGTGCCGACCGAGCCGTACTGCTTCAACCCGCTCGACGGCGTT CTCTTCTTCTCCAAAAGGCTAGATGCCTAG |
| Gene | >Hirsu2|4697 ATGGCCGCCGTCCGCGCATGCTTCGGCGCCTACACGGCCTGGCTGGACGAGGACATCTCCTTCCAGAACTACGCG GCCGAGCTGGGCGGGCTACCGGGCCAGTACGCGGCCGCGGCTGGCGGCGCCCTGCTGCTGGCCGTCAACGCCGGC GGCCAGATCCTGGGCTGCGTCGCCATGCGCCCGCTGACGGTCGGGCCCCGGTACGCGGCCGGGCGGCGCGCGGGC GGCGCGCGCGTGTGCGAGATGAAACGCCTGTTCGTCTACCCCGAGGCCCGCGGCCGGCGGGTCTCGAGGGCTCTG GTCCGGGAGCTGGTCCGGACGGCGCGCGAGGCCGGCTACGACGAGATGGTCCTCGACACCATGGCCCGGATGCGC GCGGCCATCGGGCTGTACGCGTCGGAGGCGTTTGTGCCGACCGAGCCGTACTGCTTCAACCCGCTCGACGGCGTT CTCTTCTTCTCCAAAAGGCTAGATGCCTAG |